BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,785,180	Δ1 bp	coding (413/495 nt)	b2655 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,785,180	0	T	.	100.0%	1288.4 / NA	275	coding (413/495 nt)	b2655	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (170/105); total (170/105)

Only 100 of 279 total aligned reads displayed.

ACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGTCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAA  >  NC_000913/2785092‑2785267

aCCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGAc                                                                                    >  2:4927823/1‑93 (MQ=255)

 ccTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACg                                                                                   <  1:2214763/93‑1 (MQ=255)

 ccTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACg                                                                                   >  2:5955023/1‑93 (MQ=255)

  cTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACgg                                                                                  >  2:193553/1‑93 (MQ=255)

  cTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACgg                                                                                  >  2:3295877/1‑93 (MQ=255)

  cTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACgg                                                                                  >  1:17643/1‑93 (MQ=255)

  cTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACgg                                                                                  >  2:3903861/1‑93 (MQ=255)

   tACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGa                                                                                 <  2:2758862/93‑1 (MQ=255)

    aCCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGAc                                                                                <  2:6686211/93‑1 (MQ=255)

    aCCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGAc                                                                                <  2:5460903/93‑1 (MQ=255)

     ccAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGAcc                                                                               >  1:6398586/1‑93 (MQ=255)

     ccAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGAcc                                                                               <  1:2825599/93‑1 (MQ=255)

       agcagATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAg                                                                             >  1:6113907/1‑93 (MQ=255)

       agcagATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAg                                                                             >  2:4221206/1‑93 (MQ=255)

        gcagATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGa                                                                            <  1:202624/93‑1 (MQ=255)

        gcagATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGa                                                                            >  2:3486221/1‑93 (MQ=255)

         cagATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGaa                                                                           >  2:7015499/1‑93 (MQ=255)

         cagATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGaa                                                                           >  2:8250302/1‑93 (MQ=255)

          agATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGaaa                                                                          >  1:4795839/1‑93 (MQ=255)

           gATCAGAGAAAATATGTATGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAAc                                                                         >  2:4526153/1‑93 (MQ=255)

            aTCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACt                                                                        >  2:7362592/1‑93 (MQ=255)

              cAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTcc                                                                      <  1:3211883/93‑1 (MQ=255)

              cAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTcc                                                                      >  1:6188899/1‑93 (MQ=255)

               agagAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTgcc                                                                     >  1:5401707/1‑93 (MQ=255)

               agagAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTccc                                                                     <  1:7817225/93‑1 (MQ=255)

               agagAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTccc                                                                     >  1:2558428/1‑93 (MQ=255)

               agagAAAATATGTCTGAATTTGAACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTccc                                                                     >  1:4893534/1‑93 (MQ=255)

                gagaAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCg                                                                    >  2:7441963/1‑93 (MQ=255)

                 agaAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCga                                                                   >  1:1418064/1‑93 (MQ=255)

                  gaAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCgaa                                                                  >  1:4554548/1‑93 (MQ=255)

                    aaaTATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCgaaga                                                                >  1:4269918/1‑93 (MQ=255)

                     aaTATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCgaagaa                                                               >  1:5603733/1‑93 (MQ=255)

                      atatGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCgaagaag                                                              >  1:7256756/1‑93 (MQ=255)

                      atatGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCgaagaag                                                              <  2:2206720/93‑1 (MQ=255)

                        atGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCgaagaagaa                                                            >  1:891872/1‑93 (MQ=255)

                        atGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCAACGGACCAGAAACTCCCgaagaagaa                                                            >  2:8054218/1‑93 (MQ=255)

                         tGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGaaa                                                           <  1:2984547/93‑1 (MQ=255)

                         tGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGaaa                                                           >  2:8162079/1‑93 (MQ=255)

                          gTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGaaaa                                                          <  1:4873005/93‑1 (MQ=255)

                          gTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGaaaa                                                          >  2:625394/1‑93 (MQ=255)

                            cTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAgg                                                        <  1:3747312/93‑1 (MQ=255)

                             tGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAggg                                                       <  1:6013350/93‑1 (MQ=255)

                              gAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGt                                                      <  2:5664714/93‑1 (MQ=255)

                              gAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGt                                                      <  2:7785194/93‑1 (MQ=255)

                              gAACTTGCACGTTGCCATTATGGGTATATCCAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGt                                                      <  1:159238/93‑1 (MQ=255)

                               aaTTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGtt                                                     <  2:50570/93‑1 (MQ=255)

                                  ttGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACt                                                  >  2:1273102/1‑93 (MQ=255)

                                   tGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTg                                                 >  1:3961930/1‑93 (MQ=255)

                                    gCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTgg                                                <  1:1864062/93‑1 (MQ=255)

                                       cGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGttt                                             <  2:8637168/93‑1 (MQ=255)

                                       cGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGttt                                             >  2:7607545/1‑93 (MQ=255)

                                        gTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTc                                            >  2:1121601/1‑93 (MQ=255)

                                          tGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCAt                                          >  2:6404107/1‑93 (MQ=255)

                                           gCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATg                                         <  2:2392158/93‑1 (MQ=255)

                                            ccATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGc                                        >  1:7000084/1‑93 (MQ=255)

                                            ccATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGc                                        <  1:277592/93‑1 (MQ=255)

                                             cATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCt                                       <  1:2480156/93‑1 (MQ=255)

                                             cATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCt                                       <  2:7100170/93‑1 (MQ=255)

                                             cATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCt                                       <  1:4031463/93‑1 (MQ=255)

                                              aTTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCtt                                      >  1:144178/1‑93 (MQ=255)

                                               ttATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTa                                     >  2:7675633/1‑93 (MQ=255)

                                               ttATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTa                                     >  2:5188318/1‑93 (MQ=255)

                                               ttATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTGACTGGTTTCATGCTTa                                     >  2:4054541/1‑93 (MQ=255)

                                                tATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTAt                                    >  1:2345518/1‑93 (MQ=255)

                                                tATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTAt                                    <  1:414809/93‑1 (MQ=255)

                                                tATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTAt                                    <  1:587594/93‑1 (MQ=255)

                                                  tGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCa                                  <  2:4672662/93‑1 (MQ=255)

                                                      tatataCAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAAccc                              >  2:1726793/1‑93 (MQ=255)

                                                      tatataCAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAAccc                              <  1:8663393/93‑1 (MQ=255)

                                                        tataCAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGa                            >  1:5270823/1‑93 (MQ=255)

                                                        tataCAAATCACTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGa                            >  2:1506210/1‑93 (MQ=255)

                                                         ataCAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGaa                           <  1:4760356/93‑1 (MQ=255)

                                                          taCAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAg                          >  2:6288539/1‑93 (MQ=255)

                                                          taCAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAg                          >  2:3692927/1‑93 (MQ=255)

                                                           aCAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGa                         <  2:2984364/93‑1 (MQ=255)

                                                           aCAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGa                         <  1:1496507/93‑1 (MQ=255)

                                                            cAAATCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGAt                        >  2:2118540/1‑93 (MQ=255)

                                                             aaaTCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATc                       >  1:8041958/1‑93 (MQ=255)

                                                              aaTCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCt                      <  2:8808117/93‑1 (MQ=255)

                                                              aaTCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCt                      >  1:8247286/1‑93 (MQ=255)

                                                                tCCCTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCttt                    >  1:3447593/1‑93 (MQ=255)

                                                                 cccTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTg                   >  2:7932035/1‑93 (MQ=255)

                                                                  ccTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGt                  <  2:5984613/93‑1 (MQ=255)

                                                                   cTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTa                 <  2:3828031/93‑1 (MQ=255)

                                                                   cTCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTa                 >  1:7180099/1‑93 (MQ=255)

                                                                    tCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAc                >  1:2889186/1‑93 (MQ=255)

                                                                    tCCAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAc                >  2:2597513/1‑93 (MQ=255)

                                                                     ccAGTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAcc               <  2:4267876/93‑1 (MQ=255)

                                                                        gTGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAccatc            >  1:8432834/1‑93 (MQ=255)

                                                                         tGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAccatcc           >  1:8543217/1‑93 (MQ=255)

                                                                         tGACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAccatcc           <  1:5040145/93‑1 (MQ=255)

                                                                          gACAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAccatcca          >  1:995982/1‑93 (MQ=255)

                                                                           aCAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAccatccat         >  2:2007550/1‑93 (MQ=255)

                                                                           aCAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAccatccat         >  1:2393923/1‑93 (MQ=255)

                                                                           aCAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAccatccat         >  1:3302219/1‑93 (MQ=255)

                                                                            cAACTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATa        >  1:3700492/1‑93 (MQ=255)

                                                                              aCTTTCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAAt      >  2:8420959/1‑93 (MQ=255)

                                                                                tttCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATcc    >  2:1860404/1‑93 (MQ=255)

                                                                                tttCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATcc    >  1:3545771/1‑93 (MQ=255)

                                                                                  tCCGCG‑CCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCaa  <  1:1082766/93‑1 (MQ=255)

ACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGTCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAA  >  NC_000913/2785092‑2785267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`