BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,075,220	(T)_5→6	coding (256/357 nt)	yggP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,075,215	1	.	T	98.9%	968.7 / 1.7	274	coding (261/357 nt)	yggP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/2); new base T (147/123); total (148/126)
Fisher's exact test for biased strand distribution p-value = 5.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 329 total aligned reads displayed.

ATAAGTGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA  >  NC_000913/3075123‑3075302

ataAGTGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGcc                                                                                            <  2:3194366/93‑1 (MQ=255)

 taAGTGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑t                                                                                          <  1:4061313/93‑1 (MQ=255)

 aaaGTGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑t                                                                                          <  1:2795471/92‑1 (MQ=255)

   aGTGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt                                                                                        <  1:8798251/93‑1 (MQ=255)

   aGTGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt                                                                                        <  1:4964326/93‑1 (MQ=255)

    gTGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t                                                                                      <  1:8181438/93‑1 (MQ=255)

    gTGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t                                                                                      >  1:4278711/1‑93 (MQ=255)

     tGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t‑t                                                                                    >  1:8335150/1‑93 (MQ=255)

     tGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t‑t                                                                                    <  2:3076523/93‑1 (MQ=255)

       gCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t‑tta                                                                                  <  2:5159852/93‑3 (MQ=255)

       gCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t‑tta                                                                                  <  2:7643764/93‑3 (MQ=255)

        cATTGCCGCC‑AAATATTACGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t‑ttat                                                                                 <  1:7816887/93‑4 (MQ=255)

         aTTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t‑ttata                                                                                >  1:3413795/1‑89 (MQ=255)

         aTTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t‑ttata                                                                                >  1:3904624/1‑89 (MQ=255)

         aTTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t‑ttata                                                                                >  2:5621743/1‑89 (MQ=255)

         aTTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt‑t‑ttata                                                                                <  1:2076145/93‑5 (MQ=255)

           tGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATAtt                                                                               <  2:8436607/93‑1 (MQ=255)

            gccgccAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATAttt                                                                              >  1:8357637/1‑93 (MQ=255)

             ccgccAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTg                                                                             <  2:6608973/93‑1 (MQ=255)

               gccAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGcc                                                                           >  1:1007569/1‑93 (MQ=255)

                ccAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCa                                                                          <  1:3940530/93‑1 (MQ=255)

                 cAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAg                                                                         <  2:2262581/93‑1 (MQ=255)

                  aaaaTATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGt                                                                        <  2:5074739/93‑1 (MQ=255)

                  aaaaTATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGt                                                                        >  2:334202/1‑93 (MQ=255)

                  aaaaTATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGt                                                                        >  2:6844667/1‑93 (MQ=255)

                  aaaaTATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGt                                                                        >  1:4930300/1‑93 (MQ=255)

                    aaTATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTga                                                                      >  2:5727731/1‑93 (MQ=255)

                     atatT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTgag                                                                     >  2:6353601/1‑93 (MQ=255)

                      tatT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTgagt                                                                    >  2:7901825/1‑92 (MQ=255)

                      tatT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTgaga                                                                    <  2:1354985/93‑1 (MQ=255)

                       atT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGAt                                                                   <  1:6049350/93‑1 (MQ=255)

                       atT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGAt                                                                   <  2:1160482/93‑1 (MQ=255)

                       atT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGAt                                                                   <  1:6734960/93‑1 (MQ=255)

                        tt‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGAtt                                                                  >  2:4058740/1‑93 (MQ=255)

                        tt‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGAtt                                                                  <  2:4473667/93‑1 (MQ=255)

                        tt‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGAtt                                                                  >  1:3516640/1‑93 (MQ=255)

                           cGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGAtttt                                                                >  2:8024487/1‑93 (MQ=255)

                            gTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGAttttt                                                               <  2:3781146/93‑1 (MQ=255)

                             tAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTa                                                              >  2:7121841/1‑93 (MQ=255)

                              aGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTAc                                                             >  1:454612/1‑93 (MQ=255)

                               gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTAcc                                                            >  2:7482894/1‑93 (MQ=255)

                                 tGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCa                                                          >  1:1888814/1‑93 (MQ=255)

                                    aGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACtt                                                       <  2:5580286/93‑1 (MQ=255)

                                     gCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTc                                                      <  1:3354562/93‑1 (MQ=255)

                                      cccGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCg                                                     >  2:6918944/1‑93 (MQ=255)

                                       ccGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGa                                                    >  2:4593866/1‑93 (MQ=255)

                                           tGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAAt                                                >  1:7451487/1‑93 (MQ=255)

                                           tGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAAt                                                >  1:6398281/1‑93 (MQ=255)

                                            gAATATCCGCTTGTTATCCCGATCGCCGCTTGCAATACAAAACGCTGGCA‑TTT‑TATATATTTGCCAGTTAGATTTTTAACCACTTCGACAATa                                               <  2:6728627/93‑1 (MQ=255)

                                            gAATATCCGCTTGGTAACCCCATAGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATa                                               <  2:4749088/93‑1 (MQ=255)

                                              atatCCGCTTGGTAACCCCATCACCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAc                                             <  2:7251599/93‑1 (MQ=255)

                                                 tCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcccc                                          <  2:8253386/93‑1 (MQ=255)

                                                 tCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcccc                                          >  2:5376591/1‑93 (MQ=255)

                                                    gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGc                                       <  1:7942025/93‑1 (MQ=255)

                                                    gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGc                                       >  2:1994755/1‑93 (MQ=255)

                                                    gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGc                                       >  1:368124/1‑93 (MQ=255)

                                                        ggTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAt                                   <  2:4967609/93‑1 (MQ=255)

                                                        ggTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAt                                   >  1:47468/1‑93 (MQ=255)

                                                        ggTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAt                                   >  2:733683/1‑93 (MQ=255)

                                                        ggTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAt                                   >  2:1643152/1‑93 (MQ=255)

                                                           aaCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa                                <  2:5872740/93‑1 (MQ=255)

                                                           aaCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa                                >  1:6529088/1‑93 (MQ=255)

                                                            aCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt                               <  2:2367836/93‑1 (MQ=255)

                                                            aCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt                               >  1:3145338/1‑93 (MQ=255)

                                                            aCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt                               >  2:6178460/1‑93 (MQ=255)

                                                              cccATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGc                             >  2:1821633/1‑93 (MQ=255)

                                                              cccATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGc                             <  2:437353/93‑1 (MQ=255)

                                                               ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc                            >  1:5788496/1‑93 (MQ=255)

                                                               ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc                            <  2:6035266/93‑1 (MQ=255)

                                                               ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc                            <  1:3084096/93‑1 (MQ=255)

                                                               ccATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTAT‑TATATTTGCCAGTGAGATTTTTACCCACTCCGACAATACCCCCGGCACATTCATGcc                            <  2:8619708/93‑1 (MQ=255)

                                                                cATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGccc                           >  1:7669991/1‑93 (MQ=255)

                                                                cATCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCCGCACATTCATGccc                           >  2:3551562/1‑93 (MQ=255)

                                                                 aTCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg                          <  1:1929475/93‑1 (MQ=255)

                                                                 aTCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg                          >  1:1443090/1‑93 (MQ=255)

                                                                 aTCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGCGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg                          <  2:8751590/93‑1 (MQ=255)

                                                                  tCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCgg                         >  1:1501983/1‑93 (MQ=255)

                                                                  tCGCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCgg                         >  1:3783747/1‑93 (MQ=255)

                                                                    gCCGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTa                       >  2:5530702/1‑93 (MQ=255)

                                                                     ccGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTaa                      >  2:2671511/1‑93 (MQ=255)

                                                                     ccGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTaa                      <  1:1702793/93‑1 (MQ=255)

                                                                     ccGGTTGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTaa                      <  1:8257544/93‑1 (MQ=255)

                                                                      cGGTTGCAATACAAAACGCTGGCCATTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt                     <  2:7560985/93‑1 (MQ=255)

                                                                         ttGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                  <  2:4161116/93‑1 (MQ=255)

                                                                         ttGCAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                  <  1:7008328/93‑1 (MQ=255)

                                                                            cAATACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCgg               <  1:6152383/93‑1 (MQ=255)

                                                                             aaTACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGga              >  1:5846035/1‑93 (MQ=255)

                                                                             aaTACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTAACCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAGCGga              >  1:5922442/1‑93 (MQ=255)

                                                                              aTACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgat             <  1:7218365/93‑1 (MQ=255)

                                                                              aTACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgat             >  1:86896/1‑93 (MQ=255)

                                                                              aTACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgat             >  1:2770434/1‑93 (MQ=255)

                                                                               tACAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatg            >  1:1264490/1‑93 (MQ=255)

                                                                                aCAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatga           >  1:2466942/1‑93 (MQ=255)

                                                                                 cAAAACGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatgat          >  1:5701881/1‑93 (MQ=255)

                                                                                  aaaaCGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtt         >  1:5265185/1‑93 (MQ=255)

                                                                                   aaaCGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAttt        >  2:5956962/1‑93 (MQ=255)

                                                                                   aaaCGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAttt        >  2:3969737/1‑93 (MQ=255)

                                                                                    aaCGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtttt       <  1:3022897/93‑1 (MQ=255)

                                                                                     aCGCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTc      <  2:2135154/93‑1 (MQ=255)

                                                                                       gCTGGCCTTTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTa    >  1:6258055/1‑93 (MQ=255)

ATAAGTGGCATTGCCGCCAAAATATT‑CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTT‑T‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA  >  NC_000913/3075123‑3075302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`