| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,302,454 | (C)7→8 | coding (1005/1245 nt) | mtr ← | tryptophan‑specific transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,302,447 | 1 | . | C | 95.6% | 826.1 / 25.9 | 252 | coding (1012/1245 nt) | mtr | tryptophan‑specific transport protein |
| Reads supporting (aligned to +/- strand): ref base . (8/3); new base C (129/112); total (137/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
ACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAG > NC_000913/3302355‑3302534 | aCGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑g > 2:8428973/1‑93 (MQ=255)aCGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑g < 2:4237259/93‑1 (MQ=255)aCGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑g < 1:3830510/93‑1 (MQ=255) ctggCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑c > 1:7118215/3‑93 (MQ=255) cGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑c < 1:1370418/93‑1 (MQ=255) ggCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑cc‑‑c < 2:570601/93‑1 (MQ=255) ggCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑cc‑‑c < 2:3283471/93‑1 (MQ=255) ggCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑cc‑‑c > 2:2541230/1‑93 (MQ=255) cTAACAGCGCCGGAACGATTGCCGCCCAGATGGTAGCCGCTACACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGACCAACA‑A‑‑cc‑‑cac < 2:7784833/93‑3 (MQ=255) cTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑cc‑‑c‑‑cc < 1:1792624/93‑1 (MQ=255) cTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑cc‑‑c‑‑cc < 1:2092621/93‑1 (MQ=255) tAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACTAATGGCGTCAAGGAATCCGTTCGGGAACAACA‑G‑‑ac‑‑c‑‑ccc > 1:4693692/1‑93 (MQ=255) aaCAGCGCCGGAACAATTGCCGCCCAGATGGTAGTCGCTAAACCCGCATAACCAATGGCGTACAGGAATGCGTTCTGGAACAACA‑T‑‑cc‑‑a‑‑cccc > 2:4762405/1‑93 (MQ=255) aCAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑cc‑‑c‑‑ccccc > 1:8326605/1‑92 (MQ=255) aCAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑cc‑‑c‑‑ccccc > 2:668769/1‑92 (MQ=255) gcgcCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑cc‑‑c‑‑cccccaca > 1:4663660/1‑89 (MQ=255) gcgcCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑cc‑‑c‑‑cccccaca > 1:7712238/1‑89 (MQ=255) ggAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTgg < 1:5499249/93‑1 (MQ=255) aaCAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGc < 1:2647243/93‑1 (MQ=255) aaCAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCg < 1:8008016/93‑1 (MQ=255) aaCAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCg < 2:4168757/93‑1 (MQ=255) aCAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCgg > 2:4539606/1‑93 (MQ=255) cAATTGCCGCCCAGAT‑GTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCggg < 1:6595341/93‑1 (MQ=255) aaaTTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCggg < 1:7472092/92‑1 (MQ=255) aaTTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCggg > 1:4058032/1‑93 (MQ=255) aaTTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCgggg > 2:8073677/1‑93 (MQ=255) aTTGCCCCCCAGATGGTAGCCGCTAAACCAGCATAACCAGTGGCTTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCgggg < 2:3699100/93‑1 (MQ=255) ttGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGc > 1:7287603/1‑93 (MQ=255) ttGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCa > 1:5218165/1‑93 (MQ=255) tGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCaa < 1:6072821/93‑1 (MQ=255) cgccCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAgg < 2:4927603/93‑1 (MQ=255) cAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCa > 1:6734800/1‑93 (MQ=255) cAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAg > 2:7032367/1‑93 (MQ=255) aGATGGTAGCCAATAAACCAGCATAACCAATGGCGTCCAGGAATCAGTTCGGGGACAACA‑T‑‑CC‑‑CT‑CTCC‑CCAACTGGCGGGGCAAAGGGCAGc > 2:2910468/1‑93 (MQ=255) gATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAGGGgcagca > 2:1744301/1‑93 (MQ=255) gATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCa < 1:5780237/93‑1 (MQ=255) gATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCa > 2:7356540/1‑93 (MQ=255) gATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑CC‑‑C‑‑CCCCAACAACTGGCGGGGCAAAGGTCAGCa > 1:8526118/1‑93 (MQ=255) aTGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑CC‑‑CCTCCCC‑ACAACTGGCGGGGCAAAGGTCAGCa > 2:8632789/1‑93 (MQ=255) tGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCaa > 1:7775413/1‑93 (MQ=255) gTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGc > 2:1303380/1‑93 (MQ=255) gCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGt > 2:5303394/1‑93 (MQ=255) cGCAAAACTAGCATAACAAATGCAGTACAGGAATCCGTTCGGGAACAAAA‑GC‑CC‑‑C‑‑CCCC‑ACAACCGGCGGGGCAAAGGTCAGCAATGTCGttt < 2:7947043/93‑1 (MQ=255) gCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGttt > 2:3214487/1‑93 (MQ=255) gCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGttt > 2:6443828/1‑93 (MQ=255) gCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGtttt > 1:2396014/1‑93 (MQ=255) gCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGtttt > 1:5564956/1‑93 (MQ=255) gCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGtttt > 2:1673771/1‑93 (MQ=255) gCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑CC‑‑CA‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGtttt > 1:4319632/1‑93 (MQ=255) cTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGTAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTc > 1:2553181/1‑93 (MQ=255) cTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGtttt < 2:8554417/93‑1 (MQ=255) aaaCCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCaa < 2:210184/93‑1 (MQ=255) aCCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGc > 2:202686/1‑93 (MQ=255) aCCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGc > 1:3326277/1‑93 (MQ=255) ccAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCg > 1:7220868/1‑93 (MQ=255) cAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCgg > 2:5038805/1‑93 (MQ=255) cAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCgg > 2:2088780/1‑93 (MQ=255) gCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACCACTGGCGGGGCAAAGGGCAGCAAATGCGTTTTTAAGGGGcc > 2:6540553/1‑93 (MQ=255) tAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCcac > 2:2400370/1‑93 (MQ=255) aCCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCcaca < 1:3518064/93‑1 (MQ=255) aCCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAg < 1:1650961/93‑1 (MQ=255) ccAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGc < 1:3290828/93‑1 (MQ=255) ccAATGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGc > 1:2821162/1‑93 (MQ=255) aagggCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCg < 2:3457734/90‑1 (MQ=255) aaTGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCg > 1:92773/1‑93 (MQ=255) aaTGGCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCg > 2:2727129/1‑93 (MQ=255) ggCGTACAGGAGTCCGTTGGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgt < 1:2999854/93‑1 (MQ=255) ggCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgt < 2:7395222/93‑1 (MQ=255) ggCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgt < 1:317349/93‑1 (MQ=255) ggCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgt < 2:6861934/93‑1 (MQ=255) gCGTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtc < 1:5884336/93‑1 (MQ=255) gCGTACAAGAATCCGGTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgt < 1:5332778/93‑1 (MQ=255) gTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcgt < 2:7104245/93‑1 (MQ=255) gTACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAggcgt > 2:400319/1‑93 (MQ=255) tACAGGAATCCGTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcgt > 1:4946959/1‑93 (MQ=255) tACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcgtc < 1:305250/93‑1 (MQ=255) tACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcgtc < 2:5538928/93‑1 (MQ=255) tACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcgtc > 1:181414/1‑93 (MQ=255) tACAGGAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcgtc < 1:3648534/93‑1 (MQ=255) ggAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGaaa < 2:1467067/93‑1 (MQ=255) gAATCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAAc < 2:4370307/93‑1 (MQ=255) gAAGCCGATCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAAc < 1:7030040/93‑1 (MQ=255) aTCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCa > 1:2242199/1‑93 (MQ=255) aTCCGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCa < 1:2167443/93‑1 (MQ=255) aTCCGTTCGGGAACAACA‑G‑‑CCCAC‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGGAAcc > 1:8260277/1‑93 (MQ=255) ccGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCaaa < 1:6412829/93‑1 (MQ=255) ccGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCaaa > 1:4530776/1‑93 (MQ=255) cGTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAAc < 2:5973457/93‑1 (MQ=255) cGTTCGCGAACAACACC‑‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTAAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAAc < 2:1948701/93‑1 (MQ=255) gTTCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAGCTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAAc < 1:695284/93‑1 (MQ=255) gTTCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACa > 1:5261538/1‑93 (MQ=255) ttCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAg > 2:1006829/1‑93 (MQ=255) tCGGGAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAg > 2:2272765/1‑93 (MQ=255) tCGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGa < 1:5647884/93‑1 (MQ=255) cGGGAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGAt < 2:8667569/93‑1 (MQ=255) gggAACAACA‑GCCCC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGAt > 1:6165494/1‑93 (MQ=255) gggAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATc < 1:5692066/93‑1 (MQ=255) gggAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATc > 1:1000072/1‑93 (MQ=255) gggAACAACA‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATc > 2:158199/1‑93 (MQ=255) caaca‑GC‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCa > 2:6016890/1‑93 (MQ=255) | ACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACA‑G‑‑CC‑‑C‑‑CCCC‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAG > NC_000913/3302355‑3302534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |