| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,560 | +C | intergenic (‑129/‑732) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,558 | 1 | . | C | 99.0% | 1414.5 / 2.4 | 410 | intergenic (‑127/‑734) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (1/3); new base C (190/214); total (192/218) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 446 total aligned reads displayed.
AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑T‑G‑‑C‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957471‑3957645 | aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑T‑ccc < 2:1304178/93‑2 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑T‑ccct > 1:8051371/1‑91 (MQ=255) aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGGAAATCCG‑G‑G‑‑CTTCGCAGG‑T‑ccctca > 1:5345253/1‑89 (MQ=255) aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑T‑ccctca > 2:764275/1‑89 (MQ=255) gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAATCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAg > 1:7511089/1‑93 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAgg < 1:8384760/93‑1 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAggg > 1:5662849/1‑93 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAggg < 1:669366/93‑1 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATTTGGCAAAAGACCGGGAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAgggg > 1:883168/1‑93 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGGCCGGAAAAACCGGG‑G‑‑T‑TCGCAGG‑TCCCTCAAgggg > 2:6783367/1‑93 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGga < 1:4598790/93‑1 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGgag > 2:4518874/1‑93 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGgag < 1:3063264/93‑1 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCCAGGGGAGaa > 2:4037955/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGaaa > 2:2196876/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGGGAAAAc > 1:2226918/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAAc > 2:6628213/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACt < 2:3668587/93‑1 (MQ=255) aaCGTAATTGGCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCGGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAg < 2:6546850/93‑1 (MQ=255) cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAggg > 2:6193338/1‑93 (MQ=255) cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAggg > 2:5057567/1‑93 (MQ=255) cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCA‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGTGAGAAAACTTAggg < 2:7044101/93‑1 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGc < 1:623142/93‑1 (MQ=255) gTAATTGTCAGGCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGc < 1:4921723/93‑1 (MQ=255) gTAATTGTCAGCCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCCAGGGGAGAAAACTTAGGGc > 2:1876400/1‑93 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGGAAAAGACCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAAAGTAggggc > 1:5136754/1‑91 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc > 2:3423278/1‑93 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc < 2:5316908/93‑1 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctct < 1:6319136/93‑1 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctct > 1:2601524/1‑93 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa > 2:1713356/1‑93 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:8184569/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt < 1:1474198/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 2:2923238/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGGACATATATGGCAAAAGACCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg > 1:8258940/1‑93 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 1:1013926/93‑1 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 2:3221729/93‑1 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc > 2:3466101/1‑93 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 1:6444135/93‑1 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 2:8508321/93‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt < 1:4518902/93‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt < 1:2066997/93‑1 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa > 2:1955168/1‑93 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa > 1:5957627/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 2:1160422/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 2:255219/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:8588504/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 1:476068/1‑93 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 1:5404957/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 1:8670896/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa > 1:5777355/1‑93 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg < 2:5673749/93‑1 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg > 1:2904879/1‑93 (MQ=255) gTGGCTGGTACATATATGGCAAAAGGCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAATGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt > 2:6723683/1‑93 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt > 2:2306416/1‑93 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc > 2:5815370/1‑93 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 1:4146000/93‑1 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt < 1:3310159/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 2:1376327/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa > 2:7323116/1‑93 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 2:5525324/93‑1 (MQ=255) gttACATATATGGCAAAAGCCGGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:6423936/91‑1 (MQ=255) gTACATATATGGCAAAAGCCCGGAAATTCC‑‑G‑GGAT‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 2:7813210/93‑1 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc > 2:474864/1‑93 (MQ=255) aCATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 1:3723702/93‑1 (MQ=255) aCATATATGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 1:1773173/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAATCC‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg > 1:1440513/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 2:8736331/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg < 1:434162/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggggt > 1:97371/1‑92 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 1:2435145/1‑93 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTAATTATCGGGGa < 2:3893719/93‑1 (MQ=255) aatatGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGGAAG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa < 1:7124256/92‑1 (MQ=255) atatGGCAAAGGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 1:3581883/93‑1 (MQ=255) atatGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 1:1209290/93‑1 (MQ=255) atatGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 2:6041811/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 1:8563541/93‑1 (MQ=255) ggCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGGCC‑CCTCAAGGGGAGAAAACCTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt > 1:7790368/1‑93 (MQ=255) ggCAAAAGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt > 1:7411062/1‑93 (MQ=255) aaaaGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:6752219/1‑93 (MQ=255) aaaaGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:5240971/1‑93 (MQ=255) aaaGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt < 1:737460/93‑1 (MQ=255) aggCCCGCAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt < 1:6111304/91‑1 (MQ=255) aaGCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt < 2:7928248/93‑1 (MQ=255) gCCCGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 1:1907403/1‑93 (MQ=255) gCCCGGAAAATCC‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 1:6846305/1‑93 (MQ=255) cccGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 1:76939/93‑1 (MQ=255) cGGAAAATCCG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt > 1:3238247/1‑93 (MQ=255) gcttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc < 1:4704695/90‑1 (MQ=255) gcttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc < 2:1597976/90‑1 (MQ=255) gcttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc < 1:3877735/90‑1 (MQ=255) ttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa > 1:3940243/2‑93 (MQ=255) ttCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa > 2:3517865/2‑93 (MQ=255) tCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGat > 2:4271974/1‑93 (MQ=255) cGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata < 2:1997167/93‑1 (MQ=255) gCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat < 1:1110110/93‑1 (MQ=255) gCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat > 1:2824280/1‑93 (MQ=255) gCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat < 2:2457774/93‑1 (MQ=255) cAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg > 1:5504925/1‑93 (MQ=255) cAGG‑TCCCTCAAAGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg < 2:2691075/93‑1 (MQ=255) | AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑T‑G‑‑C‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957471‑3957645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |