BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,375	+A	coding (458/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,372	1	.	A	100.0%	640.4 / NA	179	S152* (TCA→TAA)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (59/120); total (59/120)

Only 100 of 242 total aligned reads displayed.

GCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCC  >  NC_000913/4008280‑4008449

gCTGGAGCGGGCGATTAGCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGCAAGTGATGGCGGGCGGC‑G‑TTT‑c                                                                                          <  2:6165939/93‑1 (MQ=255)

gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑tct‑c                                                                                          >  2:5058448/1‑93 (MQ=255)

gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑c                                                                                          <  1:5553214/93‑1 (MQ=255)

gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑c                                                                                          <  2:5315240/93‑1 (MQ=255)

gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑c                                                                                          >  1:7322241/1‑93 (MQ=255)

 cTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑a                                                                                        >  1:791187/1‑93 (MQ=255)

 cTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑C‑a                                                                                        >  1:3629974/1‑93 (MQ=255)

  tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aa                                                                                       >  1:835302/1‑93 (MQ=255)

  tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aa                                                                                       >  1:2674852/1‑93 (MQ=255)

  tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aa                                                                                       >  2:4299318/1‑93 (MQ=255)

   ggAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaa                                                                                      >  2:3121838/1‑93 (MQ=255)

   ggAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaa                                                                                      >  2:5280350/1‑93 (MQ=255)

   ggAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaa                                                                                      <  1:4333850/93‑1 (MQ=255)

   ggAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑C‑aaa                                                                                      >  1:726861/1‑93 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaaa                                                                                     <  2:1297730/93‑2 (MQ=255)

     aGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaaag                                                                                    <  1:7434914/93‑3 (MQ=255)

     aGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaaag                                                                                    >  1:3541674/1‑91 (MQ=255)

      gCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaaagg                                                                                   >  1:3352377/1‑90 (MQ=255)

      gCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑CGAAAgg                                                                                    >  1:474679/1‑93 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaaaggc                                                                                  <  1:580181/93‑5 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaaaggc                                                                                  <  2:5128387/93‑5 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaaaggc                                                                                  <  1:1046035/93‑5 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑aaaaggc                                                                                  <  2:8516130/93‑5 (MQ=255)

         ggCGATTAACGCTCGTTGGGGGGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGCGGGGCGGC‑G‑TTT‑CAAAAGGCCa                                                                                 <  1:1502902/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGGGGG‑G‑CTT‑CAAAAGGCCa                                                                                 >  1:8036521/1‑93 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCa                                                                                 <  2:8278430/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCa                                                                                 <  1:2156920/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGAGGC‑GCTTC‑C‑AAACGCCa                                                                                 >  2:2650709/1‑93 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCAt                                                                                <  1:5915878/93‑1 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATgc                                                                              <  1:1871301/93‑1 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATgc                                                                              <  1:8735088/93‑1 (MQ=255)

             aTTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATgcg                                                                             >  1:5223263/1‑93 (MQ=255)

              ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATgcgc                                                                            <  2:8452098/93‑1 (MQ=255)

              gtAACGGTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATgcgc                                                                            <  1:6227418/92‑1 (MQ=255)

               tAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGG‑TTT‑A‑AAAGGCCATGCGCt                                                                           >  2:744186/1‑93 (MQ=255)

               tAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCt                                                                           <  1:7610945/93‑1 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATTGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTg                                                                          >  2:584074/1‑93 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGG‑G‑TTTCC‑AAAAGCCATGCGCTg                                                                          >  1:5083270/1‑93 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑GTTTT‑A‑AAAAGCCCTGCGCTg                                                                          >  1:5828424/1‑93 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTg                                                                          >  1:6621501/1‑93 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTg                                                                          <  2:4890563/93‑1 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTg                                                                          <  1:4978540/93‑1 (MQ=255)

                 aCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTgg                                                                         <  1:644743/93‑1 (MQ=255)

                 aCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAAGCCATGCGCTgg                                                                         >  1:4039621/1‑93 (MQ=255)

                  cGCTCGTTGGGGCGCTCGCGTCAACGGCAGTTTCTCTTCCTTAACCTGTCTGGAAGTGATGGCTGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGa                                                                        <  1:2258103/93‑1 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGTGCTGGaa                                                                       <  2:8107064/93‑1 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGaa                                                                       >  2:6836231/1‑93 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑CAAAAGGCCCGGCGCTGGaa                                                                       >  1:4553977/1‑93 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTGTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑CAAAAGGGCATGCGCTGGAAg‑g                                                                    >  2:4046383/1‑93 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAgc                                                                     <  1:550896/93‑2 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAgc                                                                     <  2:2307825/93‑2 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAgcgg                                                                   <  1:6967008/93‑4 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGGAgcggg                                                                  >  2:1250709/1‑89 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAgcggt                                                                  <  1:5333017/93‑5 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAgcggg                                                                  >  1:1808495/1‑89 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aa                                                        <  1:1238793/93‑1 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aa                                                        <  2:8240743/93‑1 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aa                                                        <  1:3872075/93‑1 (MQ=255)

                               gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aag                                                       >  1:2418723/1‑92 (MQ=255)

                               gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aag                                                       >  2:1952946/1‑92 (MQ=255)

                               gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aag                                                       >  2:1155436/1‑92 (MQ=255)

                               gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aag                                                       >  2:1064579/1‑92 (MQ=255)

                                aTCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aaga                                                      >  1:7027906/1‑91 (MQ=255)

                                 tCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aagaa                                                     >  2:7518922/1‑90 (MQ=255)

                                 tCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aagaa                                                     <  1:796076/93‑4 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  2:446582/93‑1 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  2:1392991/93‑1 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  2:2735328/93‑1 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  2:8159967/93‑1 (MQ=255)

                                                                   cTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGttt                       <  2:6914722/93‑2 (MQ=255)

                                                                   cTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGttt                       <  2:2845594/93‑2 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCTGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      <  2:7889599/93‑3 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      <  2:2228672/93‑3 (MQ=255)

                                                                      gAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttggt                    <  2:6064375/93‑5 (MQ=255)

                                                                      gAAGTGATGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTt‑‑ttgg                  >  2:6658038/1‑92 (MQ=255)

                                                                             tGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa             <  2:5721445/93‑1 (MQ=255)

                                                                             tGGCGGGCGGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa             <  1:4840526/93‑1 (MQ=255)

                                                                              ggcgggcgGC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt            <  2:8755362/93‑1 (MQ=255)

                                                                              ggcgggcgCC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt            <  2:421304/93‑1 (MQ=255)

                                                                               gcgggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg           <  1:2455349/93‑1 (MQ=255)

                                                                               gcgggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg           <  1:2829196/93‑1 (MQ=255)

                                                                               gcgggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg           <  1:7587141/93‑1 (MQ=255)

                                                                                cgggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGa          >  1:1004117/1‑93 (MQ=255)

                                                                                cgggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGa          <  1:4501072/93‑1 (MQ=255)

                                                                                cgggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGa          <  2:2568450/93‑1 (MQ=255)

                                                                                 gggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGaa         <  2:3664216/93‑1 (MQ=255)

                                                                                 gggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGaa         <  1:2848457/93‑1 (MQ=255)

                                                                                 gggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGaa         <  2:497721/93‑1 (MQ=255)

                                                                                 gggcggC‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGaa         <  2:8639006/93‑1 (MQ=255)

                                                                                  ggcggc‑G‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAac        >  1:6847877/1‑93 (MQ=255)

                                                                                   gcggc‑g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacg       <  1:6357237/93‑1 (MQ=255)

                                                                                   gcggc‑g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacg       >  2:3764502/1‑93 (MQ=255)

                                                                                    cggc‑g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga      <  1:2025125/93‑1 (MQ=255)

                                                                                     ggc‑g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  2:6245668/93‑1 (MQ=255)

                                                                                     ggc‑g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  2:1871314/93‑1 (MQ=255)

                                                                                     ggc‑g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  1:852079/93‑1 (MQ=255)

                                                                                      gc‑g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgacg    >  1:1556823/1‑93 (MQ=255)

                                                                                         g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  <  1:8597145/93‑1 (MQ=255)

                                                                                         g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  >  2:3429348/1‑93 (MQ=255)

                                                                                         g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  >  2:511017/1‑93 (MQ=255)

GCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCC  >  NC_000913/4008280‑4008449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`