| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,139,669 | +C | coding (233/330 nt) coding (132/159 nt) |
yijI → b4558 ← |
hypothetical protein hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,139,667 | 1 | . | C | 99.6% | 951.8 / ‑4.8 | 278 | L77F (TTG→TTC) A45G (GCA→GGA) | yijI b4558 | hypothetical protein hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); major base C (126/150); minor base T (1/0); total (127/151) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.81e-01 | |||||||||||
Only 100 of 312 total aligned reads displayed.
CTTCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑CC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGACGCGCAT > NC_000913/4139576‑4139754 | cTTCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑c < 1:3874621/93‑1 (MQ=255)cTTCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑c > 2:7717668/1‑93 (MQ=255) tCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccc > 2:6999667/1‑92 (MQ=255) tCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccc > 2:6770166/1‑92 (MQ=255) tCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccc < 2:3499592/93‑2 (MQ=255) ccTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccct < 1:8456805/93‑3 (MQ=255) ccTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccct < 1:8100414/93‑3 (MQ=255) cTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccctt < 1:6918941/93‑4 (MQ=255) cTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccctt < 2:7975556/93‑4 (MQ=255) tGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑cccttg > 1:8127532/1‑89 (MQ=255) tGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑cccttg > 1:3993448/1‑89 (MQ=255) cgtcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGt < 2:5713398/93‑1 (MQ=255) gtcgGGCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAGGGGCGCTTTTGGCGTTGCCC‑TTGCGGTc < 1:7310376/93‑1 (MQ=255) tcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCa > 2:5842309/1‑93 (MQ=255) tcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCa > 1:2800444/1‑93 (MQ=255) tcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCa < 1:3071295/93‑1 (MQ=255) cgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAg < 2:6904004/93‑1 (MQ=255) ggCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGt < 1:1086583/93‑1 (MQ=255) ggCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGt > 1:7718016/1‑93 (MQ=255) gCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTg > 2:3308314/1‑93 (MQ=255) cccGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTgcg < 2:1472979/93‑1 (MQ=255) cccGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTgcg > 1:1133224/1‑93 (MQ=255) ccGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTCGCCC‑TTGCGGTCAGTgcgc > 2:7165324/1‑93 (MQ=255) cGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCa > 2:3712936/1‑93 (MQ=255) cGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCa < 2:5951541/93‑1 (MQ=255) gAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAgg < 1:792570/93‑1 (MQ=255) gAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAgg > 2:2284754/1‑93 (MQ=255) gAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAgg > 1:6089542/1‑93 (MQ=255) aaaTCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGt > 1:4256346/1‑93 (MQ=255) aaaTCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGt < 1:5022982/93‑1 (MQ=255) aaaTCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGt < 1:914047/93‑1 (MQ=255) aTCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTa > 1:7780896/1‑93 (MQ=255) gTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGcc < 2:7300566/93‑1 (MQ=255) gTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGcc < 2:3932428/93‑1 (MQ=255) gTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGcc > 1:4317718/1‑93 (MQ=255) gTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGcc > 2:1807961/1‑93 (MQ=255) tAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCa < 1:8691171/93‑1 (MQ=255) aCTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACt < 2:192531/93‑1 (MQ=255) cTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTc < 2:5181985/93‑1 (MQ=255) tGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCa > 2:7104233/1‑93 (MQ=255) tGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCa > 1:1961938/1‑93 (MQ=255) ggCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCaa < 2:2379782/93‑1 (MQ=255) ggCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCaa > 2:5225519/1‑93 (MQ=255) gCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAt > 1:1504599/1‑93 (MQ=255) gCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAt > 1:2290002/1‑93 (MQ=255) cAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAtt < 1:2458027/93‑1 (MQ=255) cAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAtt < 1:8181677/93‑1 (MQ=255) cAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAtt < 2:8614172/93‑1 (MQ=255) aGTTATCGCCCGCCAGCGTATCGGTTGCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAttt < 1:1267012/93‑1 (MQ=255) aGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAttt < 1:1820503/93‑1 (MQ=255) aGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAttt < 2:809227/93‑1 (MQ=255) gTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTtg < 1:8056172/93‑1 (MQ=255) gTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTtg > 2:3105865/1‑93 (MQ=255) gTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGAGCAGGTTATGCCACTCAATTtg > 2:3378677/1‑93 (MQ=255) ttATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTtgt > 1:5957198/1‑93 (MQ=255) ttATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTtgt < 2:4619929/93‑1 (MQ=255) tATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTtgtg < 2:122177/93‑1 (MQ=255) aTCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGtga > 2:5446144/1‑93 (MQ=255) aTCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGtga < 1:143989/93‑1 (MQ=255) ccgccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGaaa < 1:4734840/93‑1 (MQ=255) cgccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGaaaa > 1:5762598/1‑93 (MQ=255) gccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGaaaaa > 2:2986524/1‑93 (MQ=255) gccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGaaaaa < 1:7360815/93‑1 (MQ=255) aGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTa < 1:3763328/93‑1 (MQ=255) aGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTa < 2:4594308/93‑1 (MQ=255) aGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTa < 2:8330876/93‑1 (MQ=255) aGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTa > 1:2517730/1‑93 (MQ=255) gCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTAt > 1:7080517/1‑93 (MQ=255) cGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTAtt < 2:2810404/93‑1 (MQ=255) cGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTAtt < 2:7234439/93‑1 (MQ=255) gTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTa > 2:2193542/1‑93 (MQ=255) gTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTa > 1:3146695/1‑93 (MQ=255) gTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTa < 1:5439517/93‑1 (MQ=255) tATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTac > 2:1632099/1‑93 (MQ=255) tATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTac < 1:7651026/93‑1 (MQ=255) aTCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑CCGTTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTaca < 1:1003376/93‑1 (MQ=255) tCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTacac < 2:8142739/93‑1 (MQ=255) tCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTacac > 1:5268309/1‑93 (MQ=255) gTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGc < 2:2499286/93‑1 (MQ=255) gTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGGTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGc > 1:3502875/1‑93 (MQ=255) gTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑ATGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTAGAAAGc > 2:3567448/1‑93 (MQ=255) tGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCg > 2:1500734/1‑93 (MQ=255) cAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGttt > 1:7250294/1‑93 (MQ=255) cAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGttt < 1:5927899/93‑1 (MQ=255) aaTCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTc > 2:4781017/1‑93 (MQ=255) aTCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCa < 2:256452/93‑1 (MQ=255) cAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAAc < 1:321754/93‑1 (MQ=255) cAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAAc < 1:6787810/93‑1 (MQ=255) cAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAAc < 1:5221145/93‑1 (MQ=255) cgcAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTg < 1:4451689/93‑1 (MQ=255) gcAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTgg < 1:6349103/93‑1 (MQ=255) cAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGc < 2:6081861/93‑1 (MQ=255) aaGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCt < 2:6437089/93‑1 (MQ=255) aaGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCt < 2:4976858/93‑1 (MQ=255) gggCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTg < 1:6973808/93‑1 (MQ=255) gcgcTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGcc < 2:8274243/93‑1 (MQ=255) cgcTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCg < 1:7093944/93‑1 (MQ=255) ttttGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGAc < 2:7620481/93‑1 (MQ=255) ttttGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGAc > 1:1673051/1‑93 (MQ=255) ttttGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGAc < 1:2979458/93‑1 (MQ=255) | CTTCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑CC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGACGCGCAT > NC_000913/4139576‑4139754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |