BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 578098	275 (0.800)	18 (0.050)	5/184	27.6	6.1%	coding (19/294 nt)	ybcU	Bor‑like protein
*	?	NC_000913	= 1467264	NA (NA)	18 (0.050)	5/184	27.6	6.1%	intergenic (‑46/‑118)	yi212/tra82	hypothetical protein/IS30 transposase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 277 total aligned reads displayed.

GATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAG  >  NC_000913/578006‑578190

gATGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGc                                                                                              >  2:3464997/1‑93 (MQ=255)

 aTGGTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCg                                                                                             <  2:7974442/93‑1 (MQ=255)

   ggTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAg                                                                                           >  1:7150490/1‑93 (MQ=255)

    gTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAga                                                                                          >  1:7543472/1‑92 (MQ=255)

    gTTTCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGt                                                                                          <  1:5754853/93‑1 (MQ=255)

     tttCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTa                                                                                         <  1:8695087/93‑1 (MQ=255)

      ttCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAg                                                                                        <  2:3967693/93‑1 (MQ=255)

      ttCCTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAg                                                                                        <  1:398824/93‑1 (MQ=255)

        ccTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCa                                                                                      >  2:6569953/1‑93 (MQ=255)

         cTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAt                                                                                     <  2:1368930/93‑1 (MQ=255)

         cTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAt                                                                                     <  1:4851462/93‑1 (MQ=255)

         cTTTGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAt                                                                                     <  1:661968/93‑1 (MQ=255)

           ttGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAttt                                                                                   <  2:6795061/93‑1 (MQ=255)

           ttGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAttt                                                                                   >  2:8078183/1‑93 (MQ=255)

            tGGTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAtttt                                                                                  <  1:8320324/93‑1 (MQ=255)

             ggTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAttttt                                                                                 <  1:3613140/93‑1 (MQ=255)

             ggTGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAttttt                                                                                 >  2:1770143/1‑93 (MQ=255)

               tGCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAttttttt                                                                               <  1:2552844/93‑1 (MQ=255)

                gCTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTc                                                                              <  1:7011316/93‑1 (MQ=255)

                 cTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCa                                                                             <  2:8477500/93‑1 (MQ=255)

                 cTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCa                                                                             <  2:3571326/93‑1 (MQ=255)

                 cTACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCa                                                                             <  1:8501132/93‑1 (MQ=255)

                  tACCGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCAt                                                                            >  1:8036806/1‑93 (MQ=255)

                   accgctgTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATg                                                                           <  1:67241/90‑1 (MQ=255)

                   accgctgTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATg                                                                           <  1:941842/90‑1 (MQ=255)

                     cgctgTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGgt                                                                         <  1:2188110/92‑1 (MQ=255)

                      gctgTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGgtg                                                                        <  2:5227679/93‑1 (MQ=255)

                      cgtttctctTTTTTTTGTAATGTAAATGTCTGTTGAACACATCCTGTAATAAGCAGGGCCAGGGCAGTAGCGAGTAGCATTTTTTTCATGgtg                                                                        <  1:2759982/89‑1 (MQ=255)

                       ctgtctgtTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGgtgt                                                                       <  2:3973827/93‑1 (MQ=255)

                        tgtctgtTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGtt                                                                      <  2:781977/93‑1 (MQ=255)

                        tgtctgtTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGT‑GGATTTTTTTCATGGTGTTa                                                                     >  1:6015983/1‑93 (MQ=255)

                         gtctgtTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTa                                                                     <  2:2276125/93‑1 (MQ=255)

                         gtctgtTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTa                                                                     <  2:853605/93‑1 (MQ=255)

                         gtctgtTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTa                                                                     >  1:2979662/1‑93 (MQ=255)

                          tctgtTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTAt                                                                    <  1:2018273/93‑1 (MQ=255)

                           ctgtTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTAtt                                                                   <  2:3863873/93‑1 (MQ=255)

                           ctgtTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGCAGCGAGTAGCATTTTTTTCATGGTGTTAtc                                                                   >  1:5843375/1‑92 (MQ=255)

                              tttgtttTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTccc                                                                <  2:7353669/93‑1 (MQ=255)

                              tttgtttTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTccc                                                                <  2:2393132/93‑1 (MQ=255)

                              tttgtttTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTccc                                                                <  2:5038652/93‑1 (MQ=255)

                                tgtttTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGa                                                              <  1:7323026/93‑1 (MQ=255)

                                 gtttTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGAt                                                             >  2:1818549/1‑93 (MQ=255)

                                 gtttTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGAt                                                             >  2:3739947/1‑93 (MQ=255)

                                 gtttTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGAt                                                             <  1:3590656/93‑1 (MQ=255)

                                  ttttGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATg                                                            >  1:1691510/1‑93 (MQ=255)

                                   tttGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGc                                                           <  1:4050720/93‑1 (MQ=255)

                                      gAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCttt                                                        <  2:8727411/93‑1 (MQ=255)

                                       aaCAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGGGTTATTCCCGATGCtttt                                                       >  2:1809102/1‑93 (MQ=255)

                                          aGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGa                                                    <  2:4631024/93‑1 (MQ=255)

                                          aGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGa                                                    <  1:5138361/93‑1 (MQ=255)

                                           gTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGaa                                                   >  1:8051361/1‑93 (MQ=255)

                                           gTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGaa                                                   <  1:837595/93‑1 (MQ=255)

                                            tAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAg                                                  >  1:2639206/1‑93 (MQ=255)

                                            tAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAg                                                  >  2:2996392/1‑93 (MQ=255)

                                            tAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAg                                                  <  2:5429226/93‑1 (MQ=255)

                                             aaaTGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGt                                                 >  2:3713338/1‑93 (MQ=255)

                                              aaTTTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGtt                                                <  2:2539402/93‑1 (MQ=255)

                                               aTGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTc                                               <  2:2909235/93‑1 (MQ=255)

                                                 gTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGc                                             >  2:828521/1‑93 (MQ=255)

                                                   cTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAg                                           >  2:6188775/1‑93 (MQ=255)

                                                   cTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAg                                           <  1:1579070/93‑1 (MQ=255)

                                                   cTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAg                                           <  1:4185722/93‑1 (MQ=255)

                                                     gTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGaa                                         <  2:4381679/93‑1 (MQ=255)

                                                      ttGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAAt                                        <  2:6222254/93‑1 (MQ=255)

                                                      ttGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAAt                                        >  1:7887103/1‑93 (MQ=255)

                                                      ttGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAAt                                        <  2:2291435/93‑1 (MQ=255)

                                                        gAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCg                                      <  1:4659296/93‑1 (MQ=255)

                                                         aGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGt                                     >  1:3449207/1‑93 (MQ=255)

                                                          gCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTa                                    <  2:7514535/93‑1 (MQ=255)

                                                           cacaTCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTAt                                   <  1:2322269/93‑1 (MQ=255)

                                                           cacaTCCTGTAATAAGCAGGGCCAGCGCAGTAGCAAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTAt                                   <  1:3459733/93‑1 (MQ=255)

                                                             caTCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTAtgt                                 <  2:7089221/93‑1 (MQ=255)

                                                             caTCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTAtgt                                 <  1:2377670/93‑1 (MQ=255)

                                                             caTCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTAtgt                                 <  2:413116/93‑1 (MQ=255)

                                                               tCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATgtgt                               <  2:1324812/93‑1 (MQ=255)

                                                                ccTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTa                              <  1:7637870/93‑1 (MQ=255)

                                                                 cTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAg                             <  1:182993/93‑1 (MQ=255)

                                                                    taataaGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGaaa                          <  2:8811715/93‑1 (MQ=255)

                                                                     aataaGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGaaaa                         <  2:3347203/93‑1 (MQ=255)

                                                                     aataaGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGaaaa                         <  1:3028403/93‑1 (MQ=255)

                                                                           cAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaac                   <  1:6593882/93‑1 (MQ=255)

                                                                            aGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaaca                  >  2:2035653/1‑93 (MQ=255)

                                                                            aGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaaca                  >  1:3775844/1‑93 (MQ=255)

                                                                            aGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaaca                  <  2:7714327/93‑1 (MQ=255)

                                                                             gggCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaacaa                 >  1:4362909/1‑93 (MQ=255)

                                                                              ggCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaacaaa                <  1:1333549/93‑1 (MQ=255)

                                                                                 cAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAACCAAAccc             <  2:1616580/93‑1 (MQ=255)

                                                                                 cAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGAAGAATCGTATGTGTAGAAAATTAAACAAAccc             <  1:5229560/93‑1 (MQ=255)

                                                                                  aGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCt            <  1:550815/93‑1 (MQ=255)

                                                                                     gcAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTaaa         <  1:3381037/93‑1 (MQ=255)

                                                                                     gcAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTaaa         >  1:7718661/1‑93 (MQ=255)

                                                                                        gTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACaa      <  1:1058587/93‑1 (MQ=255)

                                                                                         tAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAAt     <  1:6255304/93‑1 (MQ=255)

                                                                                          aGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATg    >  1:1148606/1‑93 (MQ=255)

                                                                                           gCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGa   <  2:1040786/93‑1 (MQ=255)

                                                                                           acGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGa   <  2:4227725/92‑1 (MQ=255)

                                                                                            cGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAg  <  2:7535008/93‑1 (MQ=255)

                                                                                            cGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAg  <  2:2732388/93‑1 (MQ=255)

                                                                                            cGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAg  <  2:2947163/93‑1 (MQ=255)

                                                                                            cGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAg  <  2:860343/93‑1 (MQ=255)

GATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAG  >  NC_000913/578006‑578190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.