New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 679422318 (0.930)35 (0.110) 7/178 25.7 10.2% coding (692/708 nt) ybeU putative tRNA ligase
?NC_000913 687077 = NA (NA)intergenic (‑107/+143) ybeJ/trs53 putative periplasmic binding transport protein/IS5 transposase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 327 total aligned reads displayed.

CGAAGAGCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGCTCGCTT  >  NC_000913/679330‑679514
                                                                                            |                                                                                            
cGAAGAGCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGa                                                                                              <  1:1777440/93‑1 (MQ=255)
cGAAGAGCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGa                                                                                              >  2:4141583/1‑93 (MQ=255)
 gAAGAGCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGaa                                                                                             >  2:3428981/1‑92 (MQ=255)
  aaGAGCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGAtg                                                                                            >  2:5523733/1‑93 (MQ=255)
   agagCTGGCAGGGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGAtgt                                                                                           <  1:6641881/93‑1 (MQ=255)
   agagCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGAtgt                                                                                           <  1:389970/93‑1 (MQ=255)
   agagCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGAtgt                                                                                           >  1:3160584/1‑93 (MQ=255)
    gagCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGaaggt                                                                                          <  2:7540879/93‑5 (MQ=255)
    gagCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGAtgtg                                                                                          >  2:2680427/1‑93 (MQ=255)
    gagCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGAtgtg                                                                                          <  2:8229430/93‑1 (MQ=255)
      gcgggCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAg                                                                                        <  1:2346732/90‑1 (MQ=255)
      gCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAg                                                                                        >  2:3572161/1‑93 (MQ=255)
       cTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGc                                                                                       <  1:5516266/93‑1 (MQ=255)
       cTGGCAGCGGGAAGCGATCGCTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGCCCAGTCTGAATGCCCGGTAACGCTTAAGGATATGacg                                                                                       >  1:309206/1‑91 (MQ=38)
         ggCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGa                                                                                     >  1:2552957/1‑93 (MQ=255)
         ggCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGa                                                                                     >  1:6818319/1‑93 (MQ=255)
          gCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGAc                                                                                    <  1:7479747/93‑1 (MQ=255)
          gCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGAc                                                                                    >  2:793404/1‑93 (MQ=255)
           cAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGAcc                                                                                   >  1:4349812/1‑93 (MQ=255)
               gggAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATg                                                                               <  1:3977239/93‑1 (MQ=255)
               gggAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATg                                                                               >  1:5230921/1‑93 (MQ=255)
               gggAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATg                                                                               >  2:3856070/1‑93 (MQ=255)
                ggAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGCATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGa                                                                              >  2:328713/1‑93 (MQ=255)
                ggAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGa                                                                              <  1:6522113/93‑1 (MQ=255)
                ggAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGa                                                                              <  1:91571/93‑1 (MQ=255)
                 gAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGaa                                                                             >  2:5113732/1‑93 (MQ=255)
                   aGCGCTCTTTTATATGCCTCGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGaaaa                                                                           <  1:1700861/93‑1 (MQ=37)
                   aGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGaaaa                                                                           <  1:7266841/93‑1 (MQ=255)
                    gCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAAc                                                                          <  1:7316396/93‑1 (MQ=255)
                      gATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACAt                                                                        <  1:3655374/93‑1 (MQ=255)
                       aTCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATg                                                                       >  2:1073715/1‑93 (MQ=255)
                       aTCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATg                                                                       <  1:8720996/93‑1 (MQ=255)
                          gTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTg                                                                    >  2:2984604/1‑93 (MQ=255)
                            ttCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGc                                                                  <  2:2816467/93‑1 (MQ=255)
                            ttCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGc                                                                  <  1:1371616/93‑1 (MQ=255)
                            ttCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGc                                                                  <  1:5863783/93‑1 (MQ=255)
                            ttCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGc                                                                  <  1:5196121/93‑1 (MQ=255)
                            ttCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGc                                                                  <  2:6073665/93‑1 (MQ=255)
                             tCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCa                                                                 <  2:6358952/93‑1 (MQ=255)
                             tCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCa                                                                 >  2:6508209/1‑93 (MQ=255)
                              cTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCaa                                                                <  1:2031507/93‑1 (MQ=255)
                                 tGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATc                                                             <  1:8111089/93‑1 (MQ=255)
                                  gCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATcc                                                            <  2:4830277/93‑1 (MQ=255)
                                   ccACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCt                                                           >  1:3598237/1‑93 (MQ=255)
                                    cACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTc                                                          >  2:2384378/1‑93 (MQ=255)
                                    cACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTc                                                          <  2:4324687/93‑1 (MQ=255)
                                     aCGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCg                                                         >  2:4555438/1‑93 (MQ=255)
                                     aCGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCg                                                         >  2:7701941/1‑93 (MQ=255)
                                       gCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGaa                                                       >  1:1518972/1‑93 (MQ=255)
                                       gCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGaa                                                       >  2:8658192/1‑93 (MQ=255)
                                        cTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGaaa                                                      <  1:6270009/93‑1 (MQ=255)
                                         ttCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAAt                                                     >  1:7056927/1‑93 (MQ=255)
                                         ttCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAAt                                                     >  1:5085288/1‑93 (MQ=255)
                                          tCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAAtt                                                    <  2:5987808/93‑1 (MQ=255)
                                              tGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGaaa                                                >  2:7013992/1‑93 (MQ=255)
                                              cggCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGCGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGaaa                                                <  1:843978/92‑1 (MQ=255)
                                               ggCAGCCATTACCTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAg                                               <  2:878795/93‑1 (MQ=255)
                                               ggCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAg                                               >  2:4667167/1‑93 (MQ=255)
                                                gCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGc                                              <  2:3751350/93‑1 (MQ=255)
                                                  aGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCac                                            <  1:3373397/93‑1 (MQ=255)
                                                  aGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCac                                            <  1:4063883/93‑1 (MQ=255)
                                                       ttAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGc                                       >  2:3204020/1‑93 (MQ=255)
                                                       ttAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGc                                       >  2:6697205/1‑93 (MQ=255)
                                                       ttAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGc                                       >  1:1977505/1‑93 (MQ=255)
                                                         tcgtGTCCGGTCTGCATGCCCGGTAACGCTTAAGGATGTGTGCGGACTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCaa                                     <  1:2705018/90‑1 (MQ=255)
                                                           cTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAAt                                   <  2:5359913/93‑1 (MQ=255)
                                                            tGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATa                                  >  2:5165525/1‑93 (MQ=255)
                                                            tGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATa                                  <  1:4738596/93‑1 (MQ=255)
                                                              tCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGa                                <  1:3856219/93‑1 (MQ=255)
                                                              tCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGa                                <  1:619584/93‑1 (MQ=255)
                                                               ccAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGAc                               <  2:6099197/93‑1 (MQ=255)
                                                                cAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACa                              <  1:5322151/93‑1 (MQ=255)
                                                                cAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACa                              <  1:4879921/93‑1 (MQ=255)
                                                                 aGTCTGAATGCCCGGTACCGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACAt                             <  1:7816984/93‑1 (MQ=255)
                                                                 aGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACAt                             <  1:8346932/93‑1 (MQ=255)
                                                                  gTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACAtt                            >  1:5793983/1‑93 (MQ=255)
                                                                  gTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACAtt                            >  2:6990078/1‑93 (MQ=255)
                                                                  gTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACAtt                            <  2:6789530/93‑1 (MQ=255)
                                                                    cTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTAt                          >  2:835635/1‑93 (MQ=255)
                                                                     tGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATc                         >  2:8518057/1‑93 (MQ=255)
                                                                     tGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATc                         <  2:8136990/93‑1 (MQ=255)
                                                                      gAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATcc                        >  2:5924495/1‑93 (MQ=255)
                                                                      gAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATcc                        <  2:3396841/93‑1 (MQ=255)
                                                                      gAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATcc                        <  1:1036737/93‑1 (MQ=255)
                                                                      gAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATcc                        >  2:1987048/1‑93 (MQ=255)
                                                                         tGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGcc                     <  1:1234032/93‑1 (MQ=255)
                                                                         tGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGcc                     <  1:2853585/93‑1 (MQ=255)
                                                                               gTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCtt               >  1:6239853/1‑93 (MQ=255)
                                                                               gTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCtt               >  2:3412723/1‑93 (MQ=255)
                                                                                tAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTa              >  2:1300181/1‑93 (MQ=255)
                                                                                 aaCGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTAt             <  1:675111/93‑1 (MQ=255)
                                                                                  aCGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATc            >  2:1654111/1‑93 (MQ=255)
                                                                                    gCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCtt          >  2:7339849/1‑93 (MQ=255)
                                                                                      ttAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCTGCCAGGCTTATCTTGc        >  1:6068169/1‑93 (MQ=255)
                                                                                      ttAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGc        >  2:5804430/1‑93 (MQ=255)
                                                                                       tAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGCt       >  2:139178/1‑93 (MQ=255)
                                                                                        aaGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGCCATTATCCGCCAGGCTTATCTTGCTc      >  1:4280840/1‑93 (MQ=255)
                                                                                         aGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGCTCg     >  1:7914280/1‑93 (MQ=255)
                                                                                           gATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGCTCGCt   >  1:5973865/1‑93 (MQ=255)
                                                                                            aTGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGCTCGCtt  <  2:6167164/93‑1 (MQ=255)
                                                                                            |                                                                                            
CGAAGAGCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGCTCGCTT  >  NC_000913/679330‑679514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.