Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 66,533 3540 bp→CCCGAGACCCGCACGCGTCGACCTGCA [araD]araB [araD], araA, araB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 66533 70072 3540 333 [0] [0] 334 [araD]–araB [araD],araA,araB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 665320 (0.000)232 (0.960)
+CCCGAGACCCGCACGCGTCGACCTGCA
98/130 0.3 100% coding (19/696 nt) araD L‑ribulose‑5‑phosphate 4‑epimerase
?NC_000913 70073 = 0 (0.000)intergenic (‑25/‑314) araB/araC L‑ribulokinase/transcriptional regulator for ara operon

Only 100 of 333 total aligned reads displayed.

GCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC  >  NC_000913/66440‑66624
                                                                                            |                                                                                            
cccgcCCCCGCGGTCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATTCCCGGCg                                                                                              <  2:6819525/92‑1 (MQ=255)
  cgcgCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcc                                                                                            <  2:2143659‑M1/93‑3 (MQ=255)
  cgcgCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcc                                                                                            <  1:3638041‑M1/93‑3 (MQ=255)
    cgcTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccg                                                                                          >  1:6410764‑M1/1‑89 (MQ=255)
    cgcTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccg                                                                                          >  2:363602‑M1/1‑89 (MQ=255)
      cTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgag                                                                                        >  2:6728307‑M1/1‑87 (MQ=255)
        cgcgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagac                                                                                      >  2:5784069‑M1/1‑85 (MQ=255)
        cgcgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagac                                                                                      >  2:3406492‑M1/1‑85 (MQ=255)
         gcgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacc                                                                                     <  1:8333084‑M1/93‑10 (MQ=255)
         gcgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacc                                                                                     >  2:4723594‑M1/1‑84 (MQ=255)
         gcgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacc                                                                                     >  1:8459615‑M1/1‑84 (MQ=255)
           gATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACAAGGTTGTGATTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccg                                                                                   >  1:5189105‑M1/1‑82 (MQ=255)
            aTCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgc                                                                                  >  1:1894755‑M1/1‑81 (MQ=255)
             tCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgca                                                                                 >  1:2828351‑M1/1‑80 (MQ=255)
                aCGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgc                                                                              <  2:7979421‑M1/93‑17 (MQ=255)
                  ggCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgt                                                                            <  2:3713001‑M1/93‑19 (MQ=255)
                  ggCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgt                                                                            <  1:6766736‑M1/93‑19 (MQ=255)
                  ggCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGAGaccgagacccgcacgcgc                                                                            >  2:3017663‑M1/1‑75 (MQ=255)
                   gcgcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc                                                                           >  2:2864830‑M1/1‑74 (MQ=255)
                   gcgcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc                                                                           >  2:6132929‑M1/1‑74 (MQ=255)
                   gcgcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc                                                                           >  2:810641‑M1/1‑74 (MQ=255)
                   gcgcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc                                                                           <  2:1251083‑M1/93‑20 (MQ=255)
                    cgcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCGGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcg                                                                          <  1:1810084‑M1/93‑21 (MQ=255)
                    cgcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcg                                                                          >  2:5920568‑M1/1‑73 (MQ=255)
                     gcggacgTTGCCACATGTGAGCGAGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcga                                                                         <  2:4808770‑M1/90‑22 (MQ=255)
                     gcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcga                                                                         >  1:8223042‑M1/1‑72 (MQ=255)
                      cTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgac                                                                        <  2:6399901‑M1/93‑23 (MQ=255)
                        gACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacct                                                                      <  1:7959313‑M1/93‑25 (MQ=255)
                        gACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacct                                                                      >  1:1691527‑M1/1‑69 (MQ=255)
                         aCGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctg                                                                     <  1:3506271‑M1/93‑26 (MQ=255)
                           gTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcg                                                                   >  2:2635243‑M1/1‑66 (MQ=255)
                            ttGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcag                                                                  >  2:3084247‑M1/1‑65 (MQ=255)
                            ttGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcctcgaactgcag                                                                  >  2:7192744‑M1/1‑65 (MQ=255)
                             tGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcagg                                                                 <  1:1140343‑M1/93‑30 (MQ=255)
                             tGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcagg                                                                 <  1:3833238‑M1/93‑30 (MQ=255)
                              gCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggt                                                                >  2:8568751‑M1/1‑63 (MQ=255)
                              gCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggt                                                                <  1:3465124‑M1/93‑31 (MQ=255)
                                cccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtat                                                              >  2:1795630‑M1/1‑61 (MQ=255)
                                cccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtat                                                              <  1:2646127‑M1/93‑33 (MQ=255)
                                cccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtat                                                              >  1:3172466‑M1/1‑61 (MQ=255)
                                cccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGCTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtag                                                              >  2:6986710‑M1/1‑61 (MQ=255)
                                 ccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatg                                                             >  2:8201230‑M1/1‑60 (MQ=255)
                                    tgtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggag                                                          <  1:5137475‑M1/93‑37 (MQ=255)
                                    tgtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggag                                                          >  1:8663389‑M1/1‑57 (MQ=255)
                                     gtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggaga                                                         <  1:624720‑M1/93‑38 (MQ=255)
                                     gtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggaga                                                         >  1:2081631‑M1/1‑56 (MQ=255)
                                     gtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggaga                                                         >  1:3533269‑M1/1‑56 (MQ=255)
                                      tgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaa                                                        >  1:4745149‑M1/1‑55 (MQ=255)
                                        aGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggataaac                                                      <  2:1526935‑M1/93‑41 (MQ=255)
                                          cGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacag                                                    <  1:2179689‑M1/93‑43 (MQ=255)
                                            tGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagta                                                  <  1:3027234‑M1/93‑45 (MQ=255)
                                            tGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagta                                                  <  2:5297357‑M1/93‑45 (MQ=255)
                                              aCCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgaggcccgcacgcgtcgacctgcaggtatggagaaacagtaga                                                >  2:113732‑M1/1‑47 (MQ=255)
                                              aCCAGGTTGGGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtctggagaaacagtaga                                                >  2:3922183‑M1/1‑47 (MQ=255)
                                               ccAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagag                                               <  1:739928‑M1/93‑48 (MQ=255)
                                               ccAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagag                                               <  1:2350509‑M1/93‑48 (MQ=255)
                                               ccAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagaagag                                               >  1:6901637‑M1/1‑46 (MQ=255)
                                                cAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacgcgcacgcgtcgacctgcaggtatggagaaacagtagaga                                              >  1:4372528‑M1/1‑45 (MQ=255)
                                                cAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagaga                                              <  1:4188869‑M1/93‑49 (MQ=255)
                                                cAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagaga                                              >  2:6780889‑M1/1‑45 (MQ=255)
                                                  ggTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagt                                            >  2:8722012‑M1/1‑43 (MQ=255)
                                                  ggTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagt                                            <  1:6608808‑M1/93‑51 (MQ=255)
                                                    ttGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacacgcacgcgtcgacctgccggtatggagaaacagtagagagttg                                          >  2:3233585‑M1/1‑41 (MQ=255)
                                                      gtgtTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcg                                        <  2:3360562‑M1/93‑55 (MQ=255)
                                                        gtTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgat                                      >  1:1323886‑M1/1‑37 (MQ=255)
                                                            tGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaa                                  <  2:6234204‑M1/93‑61 (MQ=255)
                                                             ggCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaa                                 <  1:990521‑M1/93‑62 (MQ=255)
                                                                 gcgcCAGGTTGGCTTCTAATGCCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgt                             <  2:4172859‑M1/93‑66 (MQ=255)
                                                                   gcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtca                           <  2:4569111‑M1/93‑68 (MQ=255)
                                                                    ccAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcag                          <  1:56054‑M1/93‑69 (MQ=255)
                                                                    ccAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcag                          >  1:5782658‑M1/1‑25 (MQ=255)
                                                                    ccAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcag                          >  1:459856‑M1/1‑25 (MQ=255)
                                                                       ggTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggta                       >  1:4020533‑M1/1‑22 (MQ=255)
                                                                       ggTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggta                       <  1:1425370‑M1/93‑72 (MQ=255)
                                                                       ggTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggta                       <  1:591994‑M1/93‑72 (MQ=255)
                                                                       ggTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcagggatggagaaacagtagagagttgcgataaaaagagtcaggaa                       >  1:7081914‑M1/1‑22 (MQ=255)
                                                                        gTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtag                      <  1:256714‑M1/93‑73 (MQ=255)
                                                                         ttGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtagg                     <  2:4978230‑M1/93‑74 (MQ=255)
                                                                          tGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtagga                    <  2:5735968‑M1/93‑75 (MQ=255)
                                                                            gCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatc                  <  1:6926980‑M1/93‑77 (MQ=255)
                                                                             cTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatcc                 <  2:5398423‑M1/93‑78 (MQ=255)
                                                                              ttCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccg                >  1:947718‑M1/1‑15 (MQ=255)
                                                                               tCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgc               >  2:3852811‑M1/1‑14 (MQ=255)
                                                                                cTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgct              >  1:760610‑M1/1‑13 (MQ=255)
                                                                                 tAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgcta             >  2:2427588‑M1/1‑12 (MQ=255)
                                                                                 tAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgcta             >  2:1329729‑M1/1‑12 (MQ=255)
                                                                                 tAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgcta             <  2:2588922‑M1/93‑82 (MQ=255)
                                                                                 caatGCCCGGCCcccgagccccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgcta             <  2:4064978‑M1/92‑82 (MQ=255)
                                                                                  aaTACCCGGCGcccgagacccgcaagcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaa            <  2:6887258‑M1/93‑83 (MQ=255)
                                                                                    tACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatc          >  1:747862‑M1/1‑9 (MQ=255)
                                                                                     ccccggcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatct         <  1:6512709‑M1/89‑86 (MQ=255)
                                                                                     aCCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatct         <  1:537517‑M1/93‑86 (MQ=255)
                                                                                      cccggcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatctt        >  2:5131398‑M1/4‑7 (MQ=255)
                                                                                       ccggcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatctta       >  1:7863745‑M1/3‑6 (MQ=255)
                                                                                       ccggcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatctta       <  1:2048318‑M1/91‑88 (MQ=255)
                                                                                        cggcGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttat      >  2:7407366‑M1/2‑5 (MQ=255)
                                                                                         ggCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatg     <  1:1113529‑M1/93‑90 (MQ=255)
                                                                                         ggCGcccgagacccccacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatg     <  2:8344002‑M1/93‑90 (MQ=255)
                                                                                           cgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatgga   <  2:5983774‑M1/93‑92 (MQ=255)
                                                                                            gcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggatccgctaatcttatggat  >  2:1917590‑M1/1‑1 (MQ=255)
                                                                                            |                                                                                            
GCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC  >  NC_000913/66440‑66624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: