Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,938,7230GA67.5% 386.7 / 218.2 265P292S (CCA→TCA) yebAhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (36/50);  new base A (87/92);  total (123/142)
Fisher's exact test for biased strand distribution p-value = 3.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.28e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 285 total aligned reads displayed.

GCGCCACTGCGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTT  >  NC_000913/1938632‑1938815
                                                                                           |                                                                                            
gcgcCACTGCGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGCAATCAACACCTCTGTgtggt                                                                                             >  1:1053293/1‑93 (MQ=255)
 cgcCACTGCGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTgtgatg                                                                                            <  1:8820157/93‑1 (MQ=255)
   ccACTGCGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCa                                                                                          <  2:856855/93‑1 (MQ=255)
    cACTGTGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTCCCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCaa                                                                                         <  2:129911/93‑1 (MQ=255)
    cACTGCGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCaa                                                                                         >  1:4863635/1‑93 (MQ=255)
     ccTGCGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAAc                                                                                        <  1:1793442/92‑1 (MQ=255)
       tGCGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAAcgc                                                                                      >  1:6255266/1‑93 (MQ=255)
        gCGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAAcgcg                                                                                     >  2:1946435/1‑93 (MQ=255)
          gTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGAc                                                                                   <  2:2462120/93‑1 (MQ=255)
          gTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGAc                                                                                   <  1:1152418/93‑1 (MQ=255)
          gTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGAc                                                                                   <  1:5424249/93‑1 (MQ=255)
           tttGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGAcc                                                                                  <  2:4323611/93‑1 (MQ=255)
           tttGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGAcg                                                                                  >  2:6543837/1‑92 (MQ=255)
           tttGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGAcc                                                                                  <  1:6155114/93‑1 (MQ=255)
            ttGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCg                                                                                 <  1:4511070/93‑1 (MQ=255)
               gCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTc                                                                              >  1:5875507/1‑93 (MQ=255)
                cAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCa                                                                             >  2:6057266/1‑93 (MQ=255)
                 aaCCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCAc                                                                            >  1:3462365/1‑93 (MQ=255)
                 aaCCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCAc                                                                            >  1:2723461/1‑93 (MQ=255)
                   ccaccaCTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCg                                                                          <  2:4732639/93‑1 (MQ=255)
                   ccaccaCTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCg                                                                          >  2:4924806/1‑93 (MQ=255)
                    caccacTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCgg                                                                         >  2:2854256/1‑93 (MQ=255)
                     accacTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGa                                                                        <  1:6389433/93‑1 (MQ=255)
                      ccacTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGAt                                                                       >  1:2311748/1‑93 (MQ=255)
                        ccTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTa                                                                     <  1:2943268/92‑1 (MQ=255)
                         cTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAg                                                                    <  1:7875304/93‑1 (MQ=255)
                          ttCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGt                                                                   >  2:215094/1‑93 (MQ=255)
                          ttCACCGTAACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACGCCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGt                                                                   <  2:5947113/93‑1 (MQ=255)
                           tCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTa                                                                  <  2:2545652/93‑1 (MQ=255)
                           tCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGtc                                                                  >  1:537627/1‑92 (MQ=255)
                            cACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTac                                                                 <  1:1540150/93‑1 (MQ=255)
                             aCCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTacg                                                                >  2:7368466/1‑93 (MQ=255)
                             aCCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTacg                                                                >  2:6141508/1‑93 (MQ=255)
                               cGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTacgac                                                              <  1:8266323/93‑1 (MQ=255)
                                gTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTacgacg                                                             >  2:7579221/1‑93 (MQ=255)
                                 gcgccccCTGAAAGCACTGGCGTACCCTGCGGCGTGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGAcgc                                                            <  1:6612718/90‑1 (MQ=255)
                                   aCCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCgg                                                          >  2:1467839/1‑93 (MQ=255)
                                   aCCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCgg                                                          <  1:1304274/93‑1 (MQ=255)
                                    cccACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCggg                                                         <  2:5168622/93‑1 (MQ=255)
                                    cccACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCggg                                                         <  1:2193409/93‑1 (MQ=255)
                                    cccACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCggg                                                         >  1:749373/1‑93 (MQ=255)
                                      cACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGtt                                                       >  2:2265437/1‑93 (MQ=255)
                                       aCTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTa                                                      >  2:8012086/1‑93 (MQ=255)
                                        cTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTaa                                                     >  2:222860/1‑93 (MQ=255)
                                         tGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACTCCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTaaa                                                    <  1:3809694/93‑1 (MQ=255)
                                           aaaGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAAt                                                  <  2:6221905/93‑1 (MQ=255)
                                            aaGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAAtt                                                 <  2:7223194/93‑1 (MQ=255)
                                            aaGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAAtt                                                 >  2:3303040/1‑93 (MQ=255)
                                               cACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGa                                              <  2:3532078/93‑1 (MQ=255)
                                                 cTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACg                                            >  1:5126246/1‑93 (MQ=255)
                                                  tGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACga                                           <  1:4338692/93‑1 (MQ=255)
                                                  tGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACga                                           <  1:1622775/93‑1 (MQ=255)
                                                  cggCGTACCCTGCGGCATGGCGAAAGCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACga                                           <  2:6416707/92‑1 (MQ=255)
                                                  cggCGGACCCTGCGGCATGGCGAAATCAACACCTGTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACga                                           <  2:7900856/92‑1 (MQ=255)
                                                    gCGTACCCTGCGGCATGGCGAAATCACCGCCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACgaga                                         <  2:5748425/93‑1 (MQ=255)
                                                    gCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACgaga                                         >  2:8366197/1‑93 (MQ=255)
                                                    gCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACgaga                                         >  2:5080283/1‑93 (MQ=255)
                                                      gTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATa                                       <  1:2153709/93‑1 (MQ=255)
                                                       tACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATAc                                      >  2:7759691/1‑93 (MQ=255)
                                                        aCCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACg                                     >  1:5988996/1‑93 (MQ=255)
                                                        aCCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACg                                     <  2:6989144/93‑1 (MQ=255)
                                                        aCCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACg                                     >  1:334459/1‑93 (MQ=255)
                                                        aCCCTGCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACg                                     <  2:5341654/93‑1 (MQ=255)
                                                          ccTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGa                                   >  1:400702/1‑93 (MQ=255)
                                                          ccTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGa                                   >  1:6914044/1‑93 (MQ=255)
                                                            tGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAAc                                 <  2:3066039/93‑1 (MQ=255)
                                                             tcGGCATGGCGAAATCAACTCCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATCCGGAACt                                <  1:4642071/92‑1 (MQ=255)
                                                             gCGGCATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACt                                <  1:2542645/93‑1 (MQ=255)
                                                                 cATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGttt                            <  1:5304658/93‑1 (MQ=255)
                                                                 cATGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGttt                            <  2:3115980/93‑1 (MQ=255)
                                                                  aTGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTc                           <  2:7288576/93‑1 (MQ=255)
                                                                  aTGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTc                           <  2:1027433/93‑1 (MQ=255)
                                                                  aTGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTc                           <  2:6737396/93‑1 (MQ=255)
                                                                   tGGCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCg                          >  2:8794520/1‑93 (MQ=255)
                                                                    ggCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGc                         >  2:3886855/1‑93 (MQ=255)
                                                                    ggCGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGc                         <  1:3628126/93‑1 (MQ=255)
                                                                     gCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGcc                        >  1:3096450/1‑93 (MQ=255)
                                                                      cGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCg                       <  1:7206950/93‑1 (MQ=255)
                                                                      cGAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCg                       >  2:2031885/1‑93 (MQ=255)
                                                                       gAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGt                      >  2:1311115/1‑93 (MQ=255)
                                                                       gAAATCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGt                      <  1:7922458/93‑1 (MQ=255)
                                                                        aaaTCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTc                     >  1:3179454/1‑93 (MQ=255)
                                                                         aaTCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCg                    <  2:3025653/93‑1 (MQ=255)
                                                                          aTCAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCgg                   >  1:6352197/1‑93 (MQ=255)
                                                                            cAACACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGa                 <  1:3709211/93‑1 (MQ=255)
                                                                             aaCACCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGaa                <  2:4239791/93‑1 (MQ=255)
                                                                              accccTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAAt               <  2:8145094/90‑1 (MQ=255)
                                                                              acacCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAAt               <  1:8177017/93‑1 (MQ=255)
                                                                              acacCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAAt               >  2:2686947/1‑93 (MQ=255)
                                                                              acacCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGCCGGGAAt               >  1:6990249/1‑93 (MQ=255)
                                                                               cacCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATc              >  1:328165/1‑93 (MQ=255)
                                                                               cacCTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATc              <  1:7633003/93‑1 (MQ=255)
                                                                                 ccTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGc            >  1:848725/1‑93 (MQ=255)
                                                                                 ccTCTGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGc            >  1:4139971/1‑93 (MQ=255)
                                                                                   tctGTGTGATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCaa          >  1:5521507/1‑93 (MQ=255)
                                                                                      gtgtgGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGaa       <  1:2905785/93‑1 (MQ=255)
                                                                                      gtgtgGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGaa       <  1:6497385/93‑1 (MQ=255)
                                                                                      gtgtgATGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAAACGCAAGaa       <  2:4081509/93‑1 (MQ=255)
                                                                                       tgtgGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAAt      <  1:5735424/93‑1 (MQ=255)
                                                                                           gtgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCtt  <  2:1696491/93‑1 (MQ=255)
                                                                                           |                                                                                            
GCGCCACTGCGTTTGGCAACCACCACTTCACCGTCACCCACTGAAAGCACTGGCGTACCCTGCGGCATGGCGAAATCAACACCTCTGTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTT  >  NC_000913/1938632‑1938815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑