Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,497,5950TC64.8% 262.5 / 294.9 291V302A (GTG→GCG) b2380putative sensor protein
Reads supporting (aligned to +/- strand):  ref base T (57/45);  new base C (108/80);  total (166/125)
Fisher's exact test for biased strand distribution p-value = 8.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 299 total aligned reads displayed.

CGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAGGAAATG  >  NC_000913/2497505‑2497686
                                                                                          |                                                                                           
cGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGa                                                                                           <  1:6806707/93‑1 (MQ=255)
cGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGa                                                                                           <  1:6259631/93‑1 (MQ=255)
 gACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGAt                                                                                          >  1:5547186/1‑93 (MQ=255)
  aCTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATc                                                                                         >  2:3789435/1‑93 (MQ=255)
     aCCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCa                                                                                      >  2:6863237/1‑93 (MQ=255)
     aCCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCa                                                                                      <  1:7031369/93‑1 (MQ=255)
      cccGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCAt                                                                                     <  1:3530454/93‑1 (MQ=255)
      cccGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCAt                                                                                     <  1:58267/93‑1 (MQ=255)
      cccGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCAt                                                                                     >  1:4427247/1‑93 (MQ=255)
      cccGTCAGGCGATGAAGTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCAt                                                                                     <  1:5732917/93‑1 (MQ=255)
       ccGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCAtt                                                                                    <  2:8489904/93‑1 (MQ=255)
       ccGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCAtt                                                                                    <  1:6089896/93‑1 (MQ=255)
        cGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATtg                                                                                   >  2:1535667/1‑93 (MQ=255)
         gTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATtgt                                                                                  >  1:3491241/1‑93 (MQ=255)
         gTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATtgt                                                                                  >  2:4336014/1‑93 (MQ=255)
          tCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATtgtg                                                                                 >  1:6437239/1‑93 (MQ=255)
           cAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTgg                                                                                >  2:1993938/1‑93 (MQ=255)
                gATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGaa                                                                           >  2:5744865/1‑93 (MQ=255)
                 aTGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGaaa                                                                          >  1:149116/1‑93 (MQ=255)
                 aTGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGaaa                                                                          <  2:1722439/93‑1 (MQ=255)
                 aTGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGaaa                                                                          <  2:8521741/93‑1 (MQ=255)
                   gAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAgg                                                                        <  1:3040535/93‑1 (MQ=255)
                   gAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAgg                                                                        >  2:3363765/1‑93 (MQ=255)
                      ttACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGt                                                                     <  1:2840942/93‑1 (MQ=255)
                      ttACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGt                                                                     >  2:6993387/1‑93 (MQ=255)
                      ttACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGt                                                                     >  2:7498589/1‑93 (MQ=255)
                       tACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTc                                                                    >  2:6277254/1‑93 (MQ=255)
                        aCGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCg                                                                   <  2:2321154/93‑1 (MQ=255)
                        aCGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCg                                                                   <  1:6763172/93‑1 (MQ=255)
                         cGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGt                                                                  <  2:557866/93‑1 (MQ=255)
                          ggAAAAAGCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTg                                                                 <  1:8096996/93‑1 (MQ=255)
                           gAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGa                                                                >  1:4744421/1‑93 (MQ=255)
                           gAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGa                                                                >  2:7087638/1‑93 (MQ=255)
                           gAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGa                                                                <  2:6221870/93‑1 (MQ=255)
                           gAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGa                                                                <  1:1966616/93‑1 (MQ=255)
                              aaaTCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCg                                                             <  2:3976141/93‑1 (MQ=255)
                               aaTCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAGGGGGCGGTGGCCgg                                                            >  1:6501595/1‑93 (MQ=255)
                               aaTCATCATTAAAAACAATGATCAAGCCCACCGCACAGCAGAGATTCATTCCATGCTGGCGATCCCATTGTGTGAGAAGGGGGCCGTGAcctg                                                            >  2:726452/1‑91 (MQ=255)
                                atcatcATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGa                                                           <  1:1767074/93‑1 (MQ=255)
                                atcatcATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGa                                                           <  2:6016031/93‑1 (MQ=255)
                                 tcatcaTTAAAAACAATTATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGaa                                                          <  2:5184611/93‑1 (MQ=255)
                                 tcatcaTTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGaa                                                          >  1:5215565/1‑93 (MQ=255)
                                  catcatTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAAc                                                         <  1:6720389/93‑1 (MQ=255)
                                   atcatTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGCGGTGACCGGAACg                                                        >  2:2471609/1‑93 (MQ=255)
                                   atcatTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACg                                                        >  2:7409061/1‑93 (MQ=255)
                                   atcatTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACg                                                        <  2:105406/93‑1 (MQ=255)
                                   atcatTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACg                                                        >  1:2768300/1‑93 (MQ=255)
                                    tcatTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGc                                                       <  2:8298264/93‑1 (MQ=255)
                                    tcatTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGc                                                       >  1:5648585/1‑93 (MQ=255)
                                     catTAAAAACAATAATGAAGCCCGCCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCt                                                      <  1:7795282/93‑1 (MQ=255)
                                        tAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGCGAAAGGGGTCGCGACCGGAATGCTGaa                                                   >  2:1037485/1‑93 (MQ=255)
                                           aaaCAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAAt                                                >  2:804577/1‑93 (MQ=255)
                                            aaCAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAAtt                                               >  1:3824767/1‑93 (MQ=255)
                                             aCAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAAttt                                              >  2:7791592/1‑93 (MQ=255)
                                               aaTGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTtac                                            >  2:1805613/1‑93 (MQ=255)
                                               aaTGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTtac                                            >  2:5913192/1‑93 (MQ=255)
                                                 tgctgaAGCCCACCGCACACCAGAGATTCCTTCCATGCTGGTGATCCCATTGTGGGACAAAGGTGTCGTGACCGGAACGCTGAAAATTtacta                                          >  2:3404231/4‑93 (MQ=255)
                                                 tgatgaAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTtacta                                          >  2:2254809/1‑93 (MQ=255)
                                                  gatgaAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTtactac                                         >  2:263028/1‑93 (MQ=255)
                                                  gatgaAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTtactac                                         <  2:5361101/93‑1 (MQ=255)
                                                    tgaAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTg                                       <  2:4560515/93‑1 (MQ=255)
                                                    tgaAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTg                                       <  2:8746767/93‑1 (MQ=255)
                                                     gaAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGc                                      <  1:7959771/93‑1 (MQ=255)
                                                     gaAGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGc                                      >  1:1341020/1‑93 (MQ=255)
                                                      aaGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGcc                                     <  1:4205866/93‑1 (MQ=255)
                                                      aaGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGcc                                     >  1:7869968/1‑93 (MQ=255)
                                                       aGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGTGTCGTGACCGGAACGCTGAAAATTTACTACTGCCa                                    <  1:907822/93‑1 (MQ=255)
                                                       aGCCCACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCa                                    <  2:4961175/93‑1 (MQ=255)
                                                       aGCCCACCGCACACCAGAGATTCATTCCATGCTGGAGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCa                                    >  1:5764119/1‑93 (MQ=255)
                                                         cccACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCAcg                                  >  1:3350268/1‑93 (MQ=255)
                                                           cACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCAcgcg                                >  2:4487045/1‑93 (MQ=255)
                                                           cACCGCACACCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCAcgcg                                >  1:454772/1‑93 (MQ=255)
                                                             ccGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCa                              >  2:7617038/1‑93 (MQ=255)
                                                              cGCCCACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACTGTAACGCTGAAAATTTACTACTGCCACGCGCAt                             >  2:3490276/1‑93 (MQ=255)
                                                                cacaCCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCa                           >  1:7551594/1‑93 (MQ=255)
                                                                  cacCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGa                         >  1:592876/1‑93 (MQ=255)
                                                                  cacCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGa                         >  1:228399/1‑93 (MQ=255)
                                                                   acCAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGAt                        >  2:5568202/1‑93 (MQ=255)
                                                                    ccAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATc                       >  2:5130046/1‑93 (MQ=255)
                                                                     cAGAGATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCa                      >  1:5506780/1‑93 (MQ=255)
                                                                      agagATTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATAAc                     >  2:4269912/1‑93 (MQ=255)
                                                                       gagaTTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCAcc                    >  1:8277031/1‑93 (MQ=255)
                                                                        agaTTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCt                   >  1:8541981/1‑93 (MQ=255)
                                                                         gaTTCATTCCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTc                  <  2:2803917/93‑1 (MQ=255)
                                                                              attcCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCAt             <  2:118116/93‑1 (MQ=255)
                                                                              attcCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCAt             <  1:7402935/93‑1 (MQ=255)
                                                                              attcCATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCAt             >  2:6647699/1‑93 (MQ=255)
                                                                                 ccATGCTGGTGATCCCATAGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTAc          <  2:3194466/93‑1 (MQ=255)
                                                                                 ccATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTAc          >  1:2158806/1‑93 (MQ=255)
                                                                                  cATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACa         >  1:4273599/1‑93 (MQ=255)
                                                                                  cATGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACa         <  2:6595745/93‑1 (MQ=255)
                                                                                   ctGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAg        <  1:2602948/92‑1 (MQ=255)
                                                                                   aTGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAg        >  1:4987283/1‑93 (MQ=255)
                                                                                    tGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAgg       >  1:5055216/1‑93 (MQ=255)
                                                                                    tGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAgg       >  1:7226101/1‑93 (MQ=255)
                                                                                    tGCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAgg       >  1:1044780/1‑93 (MQ=255)
                                                                                     gCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAGGa      <  1:3684388/93‑1 (MQ=255)
                                                                                     gCTGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAGGa      <  1:5350820/93‑1 (MQ=255)
                                                                                       tGGCGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAGGaaa    >  2:2503976/1‑93 (MQ=255)
                                                                                         gTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAGGAAATg  <  2:3627843/93‑1 (MQ=255)
                                                                                          |                                                                                           
CGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAGGAAATG  >  NC_000913/2497505‑2497686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑