Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,533,0810TC66.2% 332.9 / 290.9 317R332R (CGT→CGC) ptsIPEP‑protein phosphotransferase system enzyme I
Reads supporting (aligned to +/- strand):  ref base T (53/54);  new base C (121/89);  total (174/143)
Fisher's exact test for biased strand distribution p-value = 1.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 338 total aligned reads displayed.

GGACCGCGACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTATCCGTATCG  >  NC_000913/2532991‑2533172
                                                                                          |                                                                                           
ggACCGCGACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCAc                                                                                           <  1:8781396/93‑1 (MQ=255)
ggACCGCGACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCAc                                                                                           <  1:2325255/93‑1 (MQ=255)
 gACCGCGCCGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTTTTGTTCGCAcc                                                                                          >  2:1599949/1‑93 (MQ=255)
  aCCGCGACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCa                                                                                         >  1:2823185/1‑93 (MQ=255)
      cgACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGa                                                                                     <  1:1281145/93‑1 (MQ=255)
      cgACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGa                                                                                     >  2:2004275/1‑93 (MQ=255)
       gACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAATCGGTTATTCGTCGTACCATGGAc                                                                                    >  2:5964907/1‑93 (MQ=255)
        aCGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCATTGGCTGAAGCGTGTGGCTCGCAAGCGATTATCGTTCGCACCATGGACa                                                                                   >  1:7514326/1‑93 (MQ=255)
        aCGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAATATTGTGGCTCGCAAACCGCTGTCGTGCCAACCATGGaaa                                                                                   >  2:4226101/1‑91 (MQ=255)
        aCGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACa                                                                                   >  1:4442571/1‑93 (MQ=255)
         cGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACAt                                                                                  <  1:5508633/93‑1 (MQ=255)
          gCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATc                                                                                 >  2:7138780/1‑93 (MQ=255)
          gCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATc                                                                                 <  2:3510906/93‑1 (MQ=255)
          ccACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATc                                                                                 <  1:1834779/92‑1 (MQ=255)
           cACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATcg                                                                                >  1:6196195/1‑93 (MQ=255)
           cACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATcg                                                                                >  1:64008/1‑93 (MQ=255)
           cACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATcg                                                                                >  1:5225131/1‑93 (MQ=255)
           cACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATcg                                                                                <  1:8173054/93‑1 (MQ=255)
            aCTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTTAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATcgg                                                                               <  2:47954/93‑1 (MQ=255)
            aCTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTTTCGTTCGCACCATGGACATcgg                                                                               >  1:3061704/1‑93 (MQ=255)
            aCTGCCCACTGAAGAAGAACAGGTTGCTACTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATcgg                                                                               >  1:1534445/1‑93 (MQ=255)
              tGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGGTATCGTTTGCACCATGGACATcggcg                                                                             >  2:6707521/1‑93 (MQ=255)
               gCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATcggcgg                                                                            <  1:5048109/93‑1 (MQ=255)
               gCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATcggcgg                                                                            <  2:6140664/93‑1 (MQ=255)
               gCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGATATCGTTCGCACCATGGACATcggccg                                                                            >  2:5122215/1‑91 (MQ=255)
                 ccACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGgcggcg                                                                          >  2:3965075/1‑93 (MQ=255)
                  cACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGa                                                                         >  1:2404302/1‑93 (MQ=255)
                   aCTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGAc                                                                        >  2:7775999/1‑93 (MQ=255)
                    cTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACa                                                                       <  2:4363783/93‑1 (MQ=255)
                      gaagaagaaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACaaa                                                                     >  1:773025/1‑93 (MQ=255)
                       aagaagaaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAag                                                                    >  1:8052826/1‑93 (MQ=255)
                        ataagaaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAaga                                                                   <  1:8668855/91‑1 (MQ=255)
                        agaagaaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAaga                                                                   >  2:2533080/1‑93 (MQ=255)
                        agaagaaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCTGCGGGGACAAaga                                                                   >  2:914269/1‑93 (MQ=255)
                        agaagaaCAGTGTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAaga                                                                   <  2:1235449/93‑1 (MQ=255)
                         gaagaaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAagag                                                                  >  1:3913240/1‑93 (MQ=255)
                           agaaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCt                                                                >  1:2084029/1‑93 (MQ=255)
                            gaaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTg                                                               >  2:4507763/1‑93 (MQ=255)
                             aaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGc                                                              <  1:4366496/93‑1 (MQ=255)
                             aaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGc                                                              <  1:1008706/93‑1 (MQ=255)
                             aaCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGc                                                              >  2:3336318/1‑93 (MQ=255)
                              aCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGcc                                                             >  1:1489013/1‑93 (MQ=255)
                              aCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGcc                                                             >  1:3497561/1‑93 (MQ=255)
                              aCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGcc                                                             <  2:7043777/93‑1 (MQ=255)
                              aCAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGCGGCTCGCAAGCGGTTATCGGTCGTACCATGGACATCGGCGGCGACAAAGAGCAGcc                                                             >  2:7339710/1‑93 (MQ=255)
                               cAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCa                                                            >  2:8404085/1‑93 (MQ=255)
                                 gTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGTGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATa                                                          <  2:5769342/93‑1 (MQ=255)
                                 gTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATa                                                          <  1:7100783/93‑1 (MQ=255)
                                   ttGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGGGACAAAGAGCCGCCATACa                                                        >  2:7485725/1‑93 (MQ=255)
                                   ttGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACa                                                        <  1:2581044/93‑1 (MQ=255)
                                    tgctgcTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACAt                                                       <  1:1870507/93‑1 (MQ=255)
                                      ctgctTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGa                                                     >  2:5246795/1‑93 (MQ=255)
                                       tgctTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGaa                                                    <  1:5382683/93‑1 (MQ=255)
                                         ctTACAAAGCAGTGTGTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACt                                                  <  2:3186287/93‑1 (MQ=255)
                                         ctTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACt                                                  >  1:6973269/1‑93 (MQ=255)
                                         ctTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACt                                                  >  1:4565834/1‑93 (MQ=255)
                                          ttACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACtt                                                 <  1:6613757/93‑1 (MQ=255)
                                                aGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGaa                                           >  2:8077940/1‑93 (MQ=255)
                                                 gCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGaaa                                          >  1:3868198/1‑93 (MQ=255)
                                                 gCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGaaa                                          >  1:1138947/1‑93 (MQ=255)
                                                  cAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGaaaa                                         >  2:7396179/1‑92 (MQ=255)
                                                    gTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAaagaa                                       >  2:6365619/1‑93 (MQ=255)
                                                      ggCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAagaaga                                     <  1:2697471/93‑1 (MQ=255)
                                                       gCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAagaagaa                                    >  1:6009095/1‑92 (MQ=255)
                                                       gCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAagag                                    <  1:3288321/93‑1 (MQ=255)
                                                         tGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGaa                                  >  1:7299012/1‑93 (MQ=255)
                                                          gAAGCGTGTGGTTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAAc                                 >  2:4146539/1‑93 (MQ=255)
                                                          gAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCCTACATGAACTCCCCGAAAGAAGAGAAc                                 >  2:2710366/1‑93 (MQ=255)
                                                           aaGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAAcc                                <  1:5859776/93‑1 (MQ=255)
                                                           aaGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACAGCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAAcc                                <  2:4971871/93‑1 (MQ=255)
                                                            aGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAAccc                               >  1:1065545/1‑93 (MQ=255)
                                                            aGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAAccc                               <  2:3698898/93‑1 (MQ=255)
                                                            aGCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAAccc                               >  2:2264165/1‑93 (MQ=255)
                                                             gCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCg                              >  2:222948/1‑93 (MQ=255)
                                                             gCGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCg                              >  1:4146351/1‑93 (MQ=255)
                                                              cGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGt                             >  1:5584180/1‑93 (MQ=255)
                                                              cGTGTGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGt                             >  2:6744923/1‑93 (MQ=255)
                                                               gtgtGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGtt                            >  1:7205027/1‑93 (MQ=255)
                                                               gtgtGGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGtt                            >  1:8388422/1‑93 (MQ=255)
                                                                tgtgGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTc                           >  2:5580802/1‑93 (MQ=255)
                                                                 gtgGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTcc                          <  2:3040384/93‑1 (MQ=255)
                                                                 gtgGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTcc                          >  1:2044699/1‑93 (MQ=255)
                                                                 gtgGCTCGCAAGCGGTTATAGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTcc                          <  2:5917780/93‑1 (MQ=255)
                                                                  tgGCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCt                         >  2:1492356/1‑93 (MQ=255)
                                                                    gCTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCg                       <  1:6707863/93‑1 (MQ=255)
                                                                     cTCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATCCATGAACTTCCCGAAAGAAGAGAACCCGTCCCTCgg                      >  1:3592118/1‑93 (MQ=255)
                                                                      tCGCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGc                     >  2:7694197/1‑93 (MQ=255)
                                                                        gCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTg                   >  2:105737/1‑93 (MQ=255)
                                                                        gCAAGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTg                   >  1:2156927/1‑93 (MQ=255)
                                                                          aaGCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGgc                 >  1:933754/1‑93 (MQ=255)
                                                                            gCGGTTATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGACAACCCGTTCCTCGGCCGgcgc               >  1:8310949/1‑93 (MQ=255)
                                                                              ggTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGgcgcgc             >  2:2466072/1‑93 (MQ=255)
                                                                                ttATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTa           >  1:4848153/1‑93 (MQ=255)
                                                                                ttATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTa           >  2:8180321/1‑93 (MQ=255)
                                                                                 tATCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTAt          <  1:3192673/93‑1 (MQ=255)
                                                                                  aTCGTTCGCACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTATc         >  2:6848793/1‑93 (MQ=255)
                                                                                      ttcgtACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTATCCGTa     >  2:187003/1‑93 (MQ=255)
                                                                                      ttcgtACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTATCCGTa     <  2:8541660/93‑1 (MQ=255)
                                                                                      ttcgcACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTATCCGTa     <  1:369516/93‑1 (MQ=255)
                                                                                       tcgcACCATGGACATCGGCGGCGTAAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTATCCGTAt    <  2:6257586/93‑1 (MQ=255)
                                                                                          |                                                                                           
GGACCGCGACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTATCCGTATCG  >  NC_000913/2532991‑2533172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑