BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,236,562	0	T	C	64.6%	314.1 / inf	357	V114A (GTG→GCG)	ygjT	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (59/67); new base C (133/97); total (193/164)
Fisher's exact test for biased strand distribution p-value = 5.86e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.94e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 377 total aligned reads displayed.

TCTGATTGAGAAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGATCCTGT  >  NC_000913/3236470‑3236654

  tGATTGAGAAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCgcgcgc                                                                                            >  1:632639/1‑93 (MQ=255)

   gATTGAGAAATCGCTGGCGGTCGATAACGTCTTTTTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCt                                                                                           <  2:3038592/93‑1 (MQ=255)

   gATTGAGAAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCt                                                                                           >  1:5664788/1‑93 (MQ=255)

    aTTGAGAAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTg                                                                                          >  1:3210451/1‑93 (MQ=255)

    aTTGAGAAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTg                                                                                          >  2:6924889/1‑93 (MQ=255)

        agaAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGgtgt                                                                                      >  1:1501573/1‑93 (MQ=255)

         gaAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTa                                                                                     >  2:3407545/1‑93 (MQ=255)

          aaaTCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTAt                                                                                    >  1:5897636/1‑93 (MQ=255)

           aaTCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATg                                                                                   >  1:1154547/1‑93 (MQ=255)

           aaTCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATg                                                                                   >  1:879864/1‑93 (MQ=255)

           aaTCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGATCCGGCGGCATTACAACGCCGCGCGCTGGTGTATg                                                                                   >  1:6197022/1‑93 (MQ=255)

            aTCGCTGGCGGTCCATAACGTCCTTGTCCGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATgg                                                                                  <  1:7374176/93‑1 (MQ=255)

              cGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTATATGGCg                                                                                <  2:1289129/93‑1 (MQ=255)

               gCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGt                                                                               <  1:2619300/93‑1 (MQ=255)

                cTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTg                                                                              >  2:8464170/1‑93 (MQ=255)

                cTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTg                                                                              >  1:36767/1‑93 (MQ=255)

                 tGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCAGCGCGCTGGTGTATGGCGTGc                                                                             <  1:5487073/93‑1 (MQ=255)

                 gggCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTCCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGc                                                                             <  2:7748365/92‑1 (MQ=255)

                  ggCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCt                                                                            >  2:7472223/1‑93 (MQ=255)

                    cGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCg                                                                          <  2:4000342/93‑1 (MQ=255)

                      gTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCggg                                                                        >  2:5918999/1‑93 (MQ=255)

                      gTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCggg                                                                        <  1:4303510/93‑1 (MQ=255)

                       tCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCgggg                                                                       <  2:2829972/93‑1 (MQ=255)

                        cGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGc                                                                      <  2:2150244/93‑1 (MQ=255)

                        cGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGc                                                                      <  1:4116964/93‑1 (MQ=255)

                          aTAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCgt                                                                    >  2:5578161/1‑92 (MQ=255)

                          aTAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGa                                                                    >  2:8127145/1‑93 (MQ=255)

                            aaCGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGAtt                                                                  <  2:4062447/93‑1 (MQ=255)

                             acttCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTg                                                                 <  1:2736119/90‑1 (MQ=255)

                              gggcTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGt                                                                <  1:1826685/90‑1 (MQ=255)

                              cGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGt                                                                <  2:5262993/93‑1 (MQ=255)

                              cGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGt                                                                <  2:5063069/93‑1 (MQ=255)

                               gTCTTTTTCGGGTTTATTGTGTTGATCTATTTCTAGCTTCCGGCGGCATTACACCGCAGGGCGCTGGTGTATGGGGTGCTCGGGGCGATTGtt                                                               <  2:6404035/93‑1 (MQ=255)

                                tCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTc                                                              >  1:1446603/1‑93 (MQ=255)

                                tCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTc                                                              <  2:7305631/93‑1 (MQ=255)

                                tCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTc                                                              >  2:192401/1‑93 (MQ=255)

                                tCTGTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTc                                                              <  1:8010394/93‑1 (MQ=255)

                                  tttGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTg                                                            >  2:3123867/1‑93 (MQ=255)

                                   ttGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGc                                                           <  1:5372337/93‑1 (MQ=255)

                                   ttGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGc                                                           >  1:683949/1‑93 (MQ=255)

                                      tCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTa                                                        <  1:3795814/93‑1 (MQ=255)

                                      tCTGGCTGATGGTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTa                                                        <  1:2118614/93‑1 (MQ=255)

                                       cTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTAc                                                       <  2:7982717/93‑1 (MQ=255)

                                           cTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACcatc                                                   >  1:7693798/1‑93 (MQ=255)

                                            tGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACcatca                                                  <  2:4676558/93‑1 (MQ=255)

                                             gATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACcatcat                                                 <  2:6292991/93‑1 (MQ=255)

                                             gATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACcatcat                                                 <  2:1591291/93‑1 (MQ=255)

                                               tgttgtTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGa                                               <  2:3477273/93‑1 (MQ=255)

                                               tgttgtTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGa                                               >  2:4704202/1‑93 (MQ=255)

                                                 ttgttCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATc                                             >  2:716356/1‑93 (MQ=255)

                                                 ttgttCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATc                                             >  1:2280201/1‑93 (MQ=255)

                                                  tgttCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCt                                            <  2:2562830/93‑1 (MQ=255)

                                                   tttCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCtt                                           <  1:2206262/92‑1 (MQ=255)

                                                   tttCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCtt                                           <  2:8745121/92‑1 (MQ=255)

                                                   gttCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCtt                                           >  2:2688580/1‑93 (MQ=255)

                                                     tCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCa                                         >  1:4475438/1‑93 (MQ=255)

                                                       aGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACt                                       >  1:6505007/1‑93 (MQ=255)

                                                       aGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACt                                       >  1:1690854/1‑93 (MQ=255)

                                                        gCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTg                                      <  2:1179683/93‑1 (MQ=255)

                                                        gCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTg                                      >  2:6162947/1‑93 (MQ=255)

                                                         cTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTgg                                     <  1:4042122/93‑1 (MQ=255)

                                                          tATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGc                                    >  1:360051/1‑93 (MQ=255)

                                                           aTTTCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCa                                   >  1:3324172/1‑93 (MQ=255)

                                                            tttCTCTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAg                                  >  1:102991/1‑93 (MQ=255)

                                                            tttCGCTGTGCCGTCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAg                                  <  1:8448044/93‑1 (MQ=255)

                                                             ttCTCTTTTCCGGCGCGATTAGAAGGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGc                                 <  1:4777642/93‑1 (MQ=255)

                                                              tctcTGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCt                                >  2:1833366/1‑93 (MQ=255)

                                                                tctGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTgg                              >  2:1673442/1‑93 (MQ=255)

                                                                tctGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTgg                              >  2:4126403/1‑93 (MQ=255)

                                                                 ctGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGc                             <  2:5430850/93‑1 (MQ=255)

                                                                 ctGTTCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGc                             >  1:6051784/1‑93 (MQ=255)

                                                                  tGTTCCGGCGGCATTACAAGGCCGCGCGCTGGTGTATGGCGTACTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCt                            <  2:438835/93‑1 (MQ=255)

                                                                   gTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTa                           >  1:8269631/1‑93 (MQ=255)

                                                                     tCCGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAAt                         <  1:2498497/93‑1 (MQ=255)

                                                                      cgggcgccATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCAACATGATCTTCACTGGCAGCTGGCTAAtt                        <  2:4893746/91‑1 (MQ=255)

                                                                      ccGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCGCTGGCAGCTGGCTAAtt                        >  2:364613/1‑93 (MQ=255)

                                                                      ccGGCGGCATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAAtt                        <  1:5046481/93‑1 (MQ=255)

                                                                         gcggcATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTCCCATCATGATCTTCACTGGCAGCTGGCTAATTTCg                     >  1:2906819/1‑93 (MQ=255)

                                                                         gcggcATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCg                     >  2:3230052/1‑93 (MQ=255)

                                                                             cATTACAACGCGGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGt                 <  2:3794778/93‑1 (MQ=255)

                                                                             cATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGt                 <  2:7024200/93‑1 (MQ=255)

                                                                             cATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGt                 <  1:8587151/93‑1 (MQ=255)

                                                                             cATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTTGCAGt                 >  2:6516490/1‑93 (MQ=255)

                                                                             cATTACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGt                 >  2:3316074/1‑93 (MQ=255)

                                                                              aTTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGtt                >  1:868612/1‑93 (MQ=255)

                                                                               ttACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTc               <  2:2633814/93‑1 (MQ=255)

                                                                               ttACAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTc               >  2:8246345/1‑93 (MQ=255)

                                                                                tACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCg              <  1:7541417/93‑1 (MQ=255)

                                                                                  cAACGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGAc            <  2:5357642/93‑1 (MQ=255)

                                                                                   aaCGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACt           >  2:6746775/1‑93 (MQ=255)

                                                                                   aaCGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACt           <  1:8158369/93‑1 (MQ=255)

                                                                                   aaCGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACt           <  1:1322357/93‑1 (MQ=255)

                                                                                    aCGCCGCGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTg          >  2:6802410/1‑93 (MQ=255)

                                                                                     cgccgcGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTgg         >  2:2982927/1‑93 (MQ=255)

                                                                                      gccgcGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGa        >  2:7244474/1‑93 (MQ=255)

                                                                                      gccgcGTGCTGGTGTATGGCGCGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGa        >  2:2375695/1‑93 (MQ=255)

                                                                                       ccgcGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGAt       >  1:708908/1‑93 (MQ=255)

                                                                                       ccgcGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGAt       >  1:2951016/1‑93 (MQ=255)

                                                                                       ccgcGCGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGAt       >  1:462403/1‑93 (MQ=255)

                                                                                           gTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGATCCTg   <  1:4266848/93‑1 (MQ=255)

TCTGATTGAGAAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGATCCTGT  >  NC_000913/3236470‑3236654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`