BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	493,371	0	G	A	64.0%	303.3 / 255.7	264	M24I (ATG→ATA)	ybaB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (52/43); new base A (77/92); total (129/135)
Fisher's exact test for biased strand distribution p-value = 1.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.69e-03
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 334 total aligned reads displayed.

CGTGATTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGCCGTCGCG  >  NC_000913/493280‑493462

cGTGATTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAaaaatgcagaaaatgc                                                                                            <  2:1084581/93‑1 (MQ=255)

 gTGATTGAGAGAGAAACCTATGTTTGTTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAaaaatgcagaaaatgca                                                                                           <  2:8310003/93‑1 (MQ=255)

 gTGATTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCACGCCCAGCAGATGCAAGAAaaaatgcagaaaataca                                                                                           >  2:4483701/1‑93 (MQ=255)

 gTGATTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAaaaatgcagaaaatgca                                                                                           <  1:8517745/93‑1 (MQ=255)

 gTGATTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAaaaatgcagaaaatgca                                                                                           <  1:7204599/93‑1 (MQ=255)

  tGATTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAaaaatgcagaaaatacag                                                                                          >  2:2687074/1‑93 (MQ=255)

   gATTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAgg                                                                                         <  2:4900016/93‑1 (MQ=255)

   gATTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAgg                                                                                         >  2:5230743/1‑93 (MQ=255)

    aTTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGa                                                                                        >  2:7015509/1‑93 (MQ=255)

    aTTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGa                                                                                        <  1:5036052/93‑1 (MQ=255)

     ttGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGaa                                                                                       <  2:8140107/93‑1 (MQ=255)

       gagagagaAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAaga                                                                                     <  1:4126519/93‑1 (MQ=255)

       gagagagaAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAaga                                                                                     >  2:7873114/1‑93 (MQ=255)

        agagagaAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAagag                                                                                    <  2:634573/93‑1 (MQ=255)

        agagagaAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAagag                                                                                    >  1:5445046/1‑93 (MQ=255)

          agagaAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACCGGAAGAGAt                                                                                  <  2:8601165/93‑1 (MQ=255)

           gagaAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATc                                                                                 <  1:2944854/93‑1 (MQ=255)

            agaAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATcg                                                                                >  2:433419/1‑93 (MQ=255)

             gaAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATcgc                                                                               <  2:8225725/93‑1 (MQ=255)

             gaAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATcgc                                                                               <  2:3003304/93‑1 (MQ=255)

             aaaaCCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATcgc                                                                               <  1:4251651/92‑1 (MQ=255)

                aCCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCa                                                                            >  2:2772672/1‑93 (MQ=255)

                aCCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCa                                                                            <  1:1534830/93‑1 (MQ=255)

                aCCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCa                                                                            <  2:5035457/93‑1 (MQ=255)

                aCCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCa                                                                            <  2:1647634/93‑1 (MQ=255)

                  cTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGc                                                                          <  2:3601327/93‑1 (MQ=255)

                  cTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGc                                                                          >  1:5300042/1‑93 (MQ=255)

                   tATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCt                                                                         <  1:7349637/93‑1 (MQ=255)

                    aTGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTg                                                                        >  2:5543341/1‑93 (MQ=255)

                        ttGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAg                                                                    >  2:8483866/1‑93 (MQ=255)

                         tGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGt                                                                   >  2:7105898/1‑93 (MQ=255)

                         tGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCATCTGGAAGt                                                                   <  2:5146512/93‑1 (MQ=255)

                          ggTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTc                                                                  <  1:3949859/93‑1 (MQ=255)

                          ggTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTc                                                                  >  2:2759875/1‑93 (MQ=255)

                          ggTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTc                                                                  <  1:2495565/93‑1 (MQ=255)

                           gTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCa                                                                 >  1:5239196/1‑93 (MQ=255)

                            tAAAGGCGGTCTGGGTACCCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCAc                                                                <  2:3200582/93‑1 (MQ=255)

                            tAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCAc                                                                <  1:4165230/93‑1 (MQ=255)

                            tAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCAc                                                                <  1:1340716/93‑1 (MQ=255)

                             aaaGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCAcc                                                               >  2:1755264/1‑93 (MQ=255)

                               aGGCGGTCTGGGTAACCTGATGACGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCgg                                                             <  2:4744705/93‑1 (MQ=255)

                               aGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCgg                                                             <  2:7655973/93‑1 (MQ=255)

                               aGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCgg                                                             >  1:6089672/1‑93 (MQ=255)

                               aGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCgg                                                             >  1:6144625/1‑93 (MQ=255)

                               aGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCgg                                                             <  2:3286382/93‑1 (MQ=255)

                                ggCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGc                                                            >  1:2537305/1‑93 (MQ=255)

                                   ggTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGaa                                                         >  2:1636579/1‑93 (MQ=255)

                                   ggTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCAACGGCGaa                                                         >  2:5791748/1‑93 (MQ=255)

                                    gTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAAt                                                        >  1:6745754/1‑93 (MQ=255)

                                    gTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAAt                                                        >  2:3101236/1‑93 (MQ=255)

                                     tCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATc                                                       >  2:8046317/1‑93 (MQ=255)

                                     tCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATc                                                       <  1:3203394/93‑1 (MQ=255)

                                      cTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCt                                                      >  2:3376327/1‑93 (MQ=255)

                                      cTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCt                                                      <  2:3874117/93‑1 (MQ=255)

                                      cTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCt                                                      <  2:1232261/93‑1 (MQ=255)

                                        gggTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTgg                                                    >  1:6625247/1‑93 (MQ=255)

                                        gggTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTgg                                                    >  1:335660/1‑93 (MQ=255)

                                        gggTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTgg                                                    >  1:1189581/1‑93 (MQ=255)

                                        gggTAACCTGATGAAGAAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTgg                                                    <  1:5916972/93‑1 (MQ=255)

                                         ggTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGgc                                                   <  1:74385/93‑1 (MQ=255)

                                         ggTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGgc                                                   <  2:2512239/93‑1 (MQ=255)

                                           tAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGgcgc                                                 <  1:2634961/93‑1 (MQ=255)

                                             aCCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAg                                               >  2:4286051/1‑93 (MQ=255)

                                             aCCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAg                                               <  2:7442341/93‑1 (MQ=255)

                                             aCCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAg                                               >  1:4606086/1‑93 (MQ=255)

                                               cTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAggg                                             >  2:2348098/1‑92 (MQ=255)

                                                tgatgaAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTc                                            <  1:876137/93‑1 (MQ=255)

                                                   tgaAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTgg                                         <  1:7136451/93‑1 (MQ=255)

                                                   agaAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCTGCGAATCTGGCGCAGGTCTgg                                         <  2:5682199/92‑1 (MQ=255)

                                                    gaAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGt                                        >  2:6015391/1‑93 (MQ=255)

                                                     aagcaagcCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATAGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTa                                       <  1:696041/93‑1 (MQ=255)

                                                      agcaagcCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTaa                                      >  2:224537/1‑93 (MQ=255)

                                                        caagcCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTaaaa                                    <  1:2807549/93‑1 (MQ=255)

                                                        caagcCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTaaaa                                    <  2:4988378/93‑1 (MQ=255)

                                                        caagcCCAGCAGATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTaaaa                                    >  1:8327560/1‑93 (MQ=255)

                                                           gcCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTg                                 >  1:3846588/1‑93 (MQ=255)

                                                             ccAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAACGAGAc                               >  2:4077857/1‑93 (MQ=255)

                                                                gcagATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCAt                            >  2:7760179/1‑93 (MQ=255)

                                                                  agATGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCa                          >  2:595440/1‑93 (MQ=255)

                                                                   gATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCaa                         >  1:3654970/1‑93 (MQ=255)

                                                                   gATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGGAACCGGCGAATCTGGCGCAGGTCTGGCAAAAGAGACAATCaa                         >  1:4956683/1‑93 (MQ=255)

                                                                    aTGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAAc                        <  1:8069590/93‑1 (MQ=255)

                                                                    aTGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAAc                        >  1:1962209/1‑93 (MQ=255)

                                                                    aTGCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAAc                        >  2:3504556/1‑93 (MQ=255)

                                                                      gCAAGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACgg                      >  1:6317794/1‑93 (MQ=255)

                                                                        aaGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGGGACAATCAACGGTg                    >  1:2139371/1‑93 (MQ=255)

                                                                         aGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGc                   >  2:659366/1‑93 (MQ=255)

                                                                         aGAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGc                   >  2:1532574/1‑93 (MQ=255)

                                                                          gAAAAAATGCAGAAAATACAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGca                  >  1:3062947/1‑93 (MQ=255)

                                                                              aaatgcagaaaatgcagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGcacaca              >  2:6804325/1‑93 (MQ=255)

                                                                               aatgcagaaaatacagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACaa             >  2:8733197/1‑93 (MQ=255)

                                                                                atgcagaaaatacagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAAc            >  2:4025774/1‑93 (MQ=255)

                                                                                 tgcagaaaatacagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACt           <  1:7683787/93‑1 (MQ=255)

                                                                                   cagaaaatacagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGc         >  2:8387904/1‑93 (MQ=255)

                                                                                    agaaaatacagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGcc        >  1:1054937/1‑93 (MQ=255)

                                                                                    agaaaatacagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGcc        <  2:1926693/93‑1 (MQ=255)

                                                                                     gaaaatgcagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGCCg       >  1:2282933/1‑93 (MQ=255)

                                                                                     gaaaatgcagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGCCg       >  2:4525057/1‑93 (MQ=255)

                                                                                     gaaaatacagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGCCg       <  2:2934204/93‑1 (MQ=255)

                                                                                      aaaatacagGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGCCGt      <  2:6086239/93‑1 (MQ=255)

CGTGATTGAGAGAGAAACCTATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGCCGTCGCG  >  NC_000913/493280‑493462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`