BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	878,050	0	T	C	67.9%	285.7 / 230.1	253	V29A (GTA→GCA)	yliI	putative dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (38/43); new base C (90/81); total (129/124)
Fisher's exact test for biased strand distribution p-value = 4.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 262 total aligned reads displayed.

GGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCGCGGCGGCGAGTTGCGTC  >  NC_000913/877959‑878142

     tATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCa                                                                                        >  2:2054096/1‑93 (MQ=255)

      aTGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCaa                                                                                       <  1:6769144/93‑1 (MQ=255)

      aTGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCaa                                                                                       <  2:1553620/93‑1 (MQ=255)

       tGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAg                                                                                      >  2:6009223/1‑93 (MQ=255)

        gCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGa                                                                                     >  1:6336947/1‑93 (MQ=255)

        gCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGa                                                                                     <  2:3210508/93‑1 (MQ=255)

         cATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAGCGGTAAATGTCGAAGCACTGCAAGAc                                                                                    <  1:6145301/93‑1 (MQ=255)

         cATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGAc                                                                                    >  1:3430657/1‑93 (MQ=255)

          aTCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACa                                                                                   >  1:4235906/1‑93 (MQ=255)

          aTCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACa                                                                                   >  1:2845678/1‑93 (MQ=255)

            cGACAATCCTTTTTCCTTGTTCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACaaa                                                                                 <  1:7527856/93‑1 (MQ=255)

            cGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACaaa                                                                                 >  2:1652344/1‑93 (MQ=255)

             gACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAAc                                                                                >  1:7337344/1‑93 (MQ=255)

               cAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTc                                                                              <  1:7976750/93‑1 (MQ=255)

               cAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAAATc                                                                              >  2:4380529/1‑93 (MQ=255)

               cAATCCTTTTCCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTc                                                                              <  2:1353542/93‑1 (MQ=255)

                aaTCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCg                                                                             >  1:7202328/1‑93 (MQ=255)

                aaTCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCg                                                                             >  1:6841794/1‑93 (MQ=255)

                  tCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGAc                                                                           <  2:2410741/93‑1 (MQ=255)

                  tCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGAc                                                                           >  1:2584233/1‑93 (MQ=255)

                    cTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCa                                                                         <  1:1018081/93‑1 (MQ=255)

                    cTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCa                                                                         >  2:4901724/1‑93 (MQ=255)

                     tttttCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCAt                                                                        >  1:4982468/1‑93 (MQ=255)

                     tttttCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCAt                                                                        >  2:5047446/1‑93 (MQ=255)

                      ttttCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATc                                                                       >  1:998651/1‑93 (MQ=255)

                        ttCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATccc                                                                     <  1:7897764/93‑1 (MQ=255)

                        ttCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATccc                                                                     <  2:523163/93‑1 (MQ=255)

                        ttCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATccc                                                                     >  1:1128890/1‑93 (MQ=255)

                         tCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCt                                                                    >  1:6353407/1‑93 (MQ=255)

                          ccTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGATGCACTGCAAGACAAACTCGACCATCCCTg                                                                   <  1:3629243/93‑1 (MQ=255)

                          ccTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTg                                                                   <  1:5621744/93‑1 (MQ=255)

                          ccTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTg                                                                   >  2:7882156/1‑93 (MQ=255)

                            ttGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAACACAAACTCGACCATCCCTggg                                                                 >  1:6062565/1‑93 (MQ=255)

                            ttGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTggg                                                                 >  2:2972179/1‑93 (MQ=255)

                                gCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACt                                                             >  1:3742098/1‑93 (MQ=255)

                                  cccTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTgg                                                           >  1:1353515/1‑93 (MQ=255)

                                  cccTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTgg                                                           >  2:7122390/1‑93 (MQ=255)

                                  cccTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTgc                                                           >  1:2640285/1‑92 (MQ=255)

                                   ccTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGAACATCCCTGGGCACTGGc                                                          >  2:4279076/1‑93 (MQ=255)

                                     ttATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCt                                                        >  2:1314783/1‑93 (MQ=255)

                                     ttATTTGTCTTTCGTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCt                                                        <  2:3902960/93‑1 (MQ=255)

                                       aTTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCttt                                                      <  2:5902279/93‑1 (MQ=255)

                                       aTTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCttt                                                      <  1:3961861/93‑1 (MQ=255)

                                        tttGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCtttt                                                     <  1:8288086/93‑1 (MQ=255)

                                        tttGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCGCTGGCCtttt                                                     >  1:1571633/1‑93 (MQ=255)

                                        tttGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCtttt                                                     >  1:6605402/1‑93 (MQ=255)

                                        tttGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCtttt                                                     >  2:690719/1‑93 (MQ=255)

                                        tttGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCtttt                                                     >  2:6965792/1‑93 (MQ=255)

                                        tttGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCtttt                                                     >  1:5369434/1‑93 (MQ=255)

                                           gTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTAc                                                  >  2:7381345/1‑93 (MQ=255)

                                            tctttcttCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTAcc                                                 <  2:2170062/93‑1 (MQ=255)

                                              tttcttCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCg                                               >  1:8409659/1‑93 (MQ=255)

                                              tttcttCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCg                                               >  2:7650826/1‑93 (MQ=255)

                                               ttcttcCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGa                                              >  1:4660324/1‑93 (MQ=255)

                                               ttcttcCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGa                                              <  1:1975714/93‑1 (MQ=255)

                                                  ttcCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATaa                                           <  1:907239/93‑1 (MQ=255)

                                                   tcCGCTCTCTGGGCGGCTCCTACAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAAt                                          >  2:8677522/1‑93 (MQ=255)

                                                     cGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCa                                        >  2:6149216/1‑93 (MQ=255)

                                                      gCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCAc                                       >  2:2690802/1‑93 (MQ=255)

                                                      gCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCAc                                       <  1:7438336/93‑1 (MQ=255)

                                                      gCTCTCTGGGCGGCTCCTGCAACGGGAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCAc                                       >  1:3149894/1‑93 (MQ=255)

                                                       ctctctGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACg                                      <  1:6017779/93‑1 (MQ=255)

                                                       ctctctGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCAGATAATCACg                                      <  1:5661772/93‑1 (MQ=255)

                                                        tctctGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACgg                                     >  2:7784787/1‑93 (MQ=255)

                                                         ccctGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAGCTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGt                                    <  2:5870238/91‑1 (MQ=255)

                                                          tctGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTa                                   >  1:1655699/1‑93 (MQ=255)

                                                           ctGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTAt                                  >  1:6477609/1‑93 (MQ=255)

                                                           ctGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTAt                                  <  2:8634974/93‑1 (MQ=255)

                                                            tGGGCGGCTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATg                                 >  2:8388765/1‑93 (MQ=255)

                                                             gggCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGt                                <  2:8821716/93‑1 (MQ=255)

                                                                cggcTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGGCTTTTTATCCGATAATCACGGTATGTTaa                             >  2:3522562/1‑93 (MQ=255)

                                                                cggcTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTaa                             <  1:2228718/93‑1 (MQ=255)

                                                                  gcTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATc                           <  2:571509/93‑1 (MQ=255)

                                                                  gcTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATc                           >  2:5649969/1‑93 (MQ=255)

                                                                  gcTCCTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATc                           >  2:1875438/1‑93 (MQ=255)

                                                                   cTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCa                          >  1:188157/1‑93 (MQ=255)

                                                                    tCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCAc                         >  1:1158256/1‑93 (MQ=255)

                                                                     ccTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCAct                        >  2:8185147/1‑93 (MQ=255)

                                                                      cTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCActc                       >  2:7530593/1‑93 (MQ=255)

                                                                      cTGCAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCActc                       >  2:608656/1‑93 (MQ=255)

                                                                       tGCAACGGTAGATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCActct                      <  1:6919826/93‑1 (MQ=255)

                                                                       tGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCActct                      <  2:6164972/93‑1 (MQ=255)

                                                                       tGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCActct                      <  2:5977053/93‑1 (MQ=255)

                                                                         cAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTgc                    <  2:7234623/93‑1 (MQ=255)

                                                                         cAACGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTgc                    <  2:5767667/93‑1 (MQ=255)

                                                                          aaCGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTgcg                   <  1:3426910/93‑1 (MQ=255)

                                                                          aaCGGTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTgcg                   >  2:6574627/1‑93 (MQ=255)

                                                                             ggTAAATGTCGAAGCACTGCAAGACAACCTCGACCATCCCTGGGCATTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCgcgg                <  2:3354429/93‑1 (MQ=255)

                                                                             ggTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCgcgg                <  2:6795622/93‑1 (MQ=255)

                                                                             ggTAAATGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCgcgg                <  1:1229579/93‑1 (MQ=255)

                                                                                aaaTGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCgcggcgg             <  1:2962690/93‑1 (MQ=255)

                                                                                aaaTGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCgcggcgg             <  2:2046905/93‑1 (MQ=255)

                                                                                aaaTGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCgcggcgg             >  1:5120038/1‑93 (MQ=255)

                                                                                 aaTGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCgcggcggc            >  2:4468060/1‑93 (MQ=255)

                                                                                  aTGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCgcggcggcg           <  2:2276908/93‑1 (MQ=255)

                                                                                   tGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCGCGGCGGCGa          <  2:1118755/93‑1 (MQ=255)

                                                                                   tGTCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCGCGGCGGCGa          >  2:373804/1‑93 (MQ=255)

                                                                                     tCGAAGCACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCGCGGCGGCGAGt        <  1:4347046/93‑1 (MQ=255)

                                                                                       gAAGTACTGCAAGACAAGCTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCGCGGCGGCGAGTTg      <  2:7998186/93‑1 (MQ=255)

                                                                                        aaGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCGCGGCGGCGAGTTGc     >  1:8703724/1‑93 (MQ=255)

GGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCGCGGCGGCGAGTTGCGTC  >  NC_000913/877959‑878142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`