Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,038,386 T→C L475P (CTG→CCG)  appC → putative third cytochrome oxidase subunit I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,038,3860TC99.6% 887.5 / ‑5.0 260L475P (CTG→CCG) appCputative third cytochrome oxidase subunit I
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (120/139);  total (121/139)
Fisher's exact test for biased strand distribution p-value = 4.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.39e-01

Only 100 of 266 total aligned reads displayed.

AGTTTGGTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACTGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAGCGCGATGC  >  NC_000913/1038296‑1038475
                                                                                          |                                                                                         
 gTTTGGTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGAt                                                                                        >  1:914067/1‑93 (MQ=255)
 gTTTGGTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGAt                                                                                        <  2:1916960/93‑1 (MQ=255)
  tttGGTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATc                                                                                       <  1:2077917/93‑1 (MQ=255)
   ttGGTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCa                                                                                      <  1:3256180/93‑1 (MQ=255)
    tGGTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCAt                                                                                     >  2:604665/1‑93 (MQ=255)
     ggTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATg                                                                                    <  1:7880167/93‑1 (MQ=255)
      gtcgtcAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAAACACAGGACAACTGGCTTTCTCACCGATTATGa                                                                                   >  2:5361803/1‑93 (MQ=255)
       tcgtcAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTACTCACCGATCATGAt                                                                                  <  2:394164/93‑1 (MQ=255)
       tcgtcAGCCGTGAGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGAt                                                                                  <  2:8240171/93‑1 (MQ=255)
         gtcAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCg                                                                                >  1:996626/1‑93 (MQ=255)
           cAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTa                                                                              <  1:7695347/93‑1 (MQ=255)
            aGCCGTGGGCGATACAGGCCATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAg                                                                             <  2:5475160/93‑1 (MQ=255)
            aGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAg                                                                             <  2:2783116/93‑1 (MQ=255)
            aGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAg                                                                             <  1:7452445/93‑1 (MQ=255)
            aGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAg                                                                             <  1:5349926/93‑1 (MQ=255)
            aGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAg                                                                             <  2:5823009/93‑1 (MQ=255)
            aGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAg                                                                             >  2:6417329/1‑93 (MQ=255)
            aGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAg                                                                             <  1:3079763/93‑1 (MQ=255)
             gCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAgg                                                                            <  2:8036599/93‑1 (MQ=255)
              ccGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAggg                                                                           <  2:8364335/93‑1 (MQ=255)
               cGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGc                                                                          <  2:5566065/93‑1 (MQ=255)
               cGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGc                                                                          <  1:5423249/93‑1 (MQ=255)
                gTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCt                                                                         >  2:1603645/1‑93 (MQ=255)
                 tGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCtt                                                                        >  1:3393960/1‑93 (MQ=255)
                   ggCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCttga                                                                      >  1:2423260/1‑91 (MQ=255)
                   ggCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTa                                                                      >  2:3778098/1‑93 (MQ=255)
                     cGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTaca                                                                    <  2:8259615/93‑1 (MQ=255)
                       aTACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACAcc                                                                  >  2:7005314/1‑93 (MQ=255)
                       aTACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACAcc                                                                  >  2:7678974/1‑93 (MQ=255)
                        tACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACAccc                                                                 <  2:4232491/93‑1 (MQ=255)
                        tACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACAccc                                                                 <  1:3323626/93‑1 (MQ=255)
                        tACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACAccc                                                                 >  1:5506715/1‑93 (MQ=255)
                        tACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACAccc                                                                 <  1:5818735/93‑1 (MQ=255)
                        tACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACAccc                                                                 <  1:592517/93‑1 (MQ=255)
                        tACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACAccc                                                                 <  2:2348735/93‑1 (MQ=255)
                          cAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTg                                                               <  1:8144868/93‑1 (MQ=255)
                          cAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTg                                                               <  1:7088092/93‑1 (MQ=255)
                            ggACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGtt                                                             >  2:1392786/1‑93 (MQ=255)
                            ggACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGtc                                                             >  2:6429476/1‑92 (MQ=255)
                             gACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTc                                                            <  2:4840203/93‑1 (MQ=255)
                             gACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTc                                                            <  2:7309102/93‑1 (MQ=255)
                             gACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTc                                                            <  1:3937802/93‑1 (MQ=255)
                              aCATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCt                                                           <  1:6735221/93‑1 (MQ=255)
                              aCATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCt                                                           <  1:6782727/93‑1 (MQ=255)
                                 tCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTaa                                                        >  1:1039751/1‑93 (MQ=255)
                                  cTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAAt                                                       <  1:1442463/93‑1 (MQ=255)
                                   ttACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATc                                                      >  2:716185/1‑93 (MQ=255)
                                    tACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCg                                                     >  2:8549027/1‑93 (MQ=255)
                                     aCCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGc                                                    >  1:5150822/1‑93 (MQ=255)
                                     aCCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGc                                                    >  2:413842/1‑93 (MQ=255)
                                      ccGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGcc                                                   >  2:2915817/1‑93 (MQ=255)
                                      ccGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGcc                                                   <  1:5496642/93‑1 (MQ=255)
                                       cGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACTCTGTCCTTAATCGCCg                                                  >  1:6457095/1‑93 (MQ=255)
                                        gACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGa                                                 >  1:2348539/1‑93 (MQ=255)
                                         aCATACTCCTCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCGCCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGaa                                                <  2:6813935/93‑1 (MQ=255)
                                           aTACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGt                                              <  1:1957676/93‑1 (MQ=255)
                                            tACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATAGCCGAAGTc                                             >  1:4744714/1‑93 (MQ=255)
                                              cTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTa                                           <  2:4418615/93‑1 (MQ=255)
                                                ccGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTAcc                                         <  2:2944682/93‑1 (MQ=255)
                                                 cgcgCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCt                                        <  1:4529223/93‑1 (MQ=255)
                                                  gcgcACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTg                                       >  2:2065868/1‑93 (MQ=255)
                                                  gcgcACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTg                                       <  1:3739205/93‑1 (MQ=255)
                                                   cgcACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGa                                      <  1:6016693/93‑1 (MQ=255)
                                                     cACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATg                                    >  1:1653837/1‑93 (MQ=255)
                                                      aCTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGc                                   >  2:5034866/1‑93 (MQ=255)
                                                      aCTCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGc                                   <  1:1128023/93‑1 (MQ=255)
                                                        tCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAg                                 >  1:3457536/1‑93 (MQ=255)
                                                        tCCGCTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAg                                 >  1:4891643/1‑93 (MQ=255)
                                                            cTTTAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAat                             >  1:622815/1‑93 (MQ=255)
                                                             tttAACCACAGGACAACTTCTTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATCCAGAAatc                            >  2:7195641/1‑92 (MQ=255)
                                                             tttAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAata                            <  1:4284656/93‑1 (MQ=255)
                                                             tttAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAata                            >  1:4727970/1‑93 (MQ=255)
                                                               tAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATg                          >  2:2648520/1‑93 (MQ=255)
                                                               tAACCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAAAATg                          >  1:6536031/1‑93 (MQ=255)
                                                                aaCCACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGc                         <  1:2701331/93‑1 (MQ=255)
                                                                  ccACAGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGccc                       >  1:6350572/1‑93 (MQ=255)
                                                                     caGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGtt                    >  2:6766884/1‑92 (MQ=255)
                                                                     caGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTc                    <  2:8117635/93‑1 (MQ=255)
                                                                      aGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCt                   >  1:8388985/1‑93 (MQ=255)
                                                                      aGGACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCt                   >  2:7548802/1‑93 (MQ=255)
                                                                       ggACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTg                  >  1:8628533/1‑93 (MQ=255)
                                                                       ggACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTg                  >  1:7304350/1‑93 (MQ=255)
                                                                       ggACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTg                  >  1:7711439/1‑93 (MQ=255)
                                                                        gACAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTgg                 <  1:288048/93‑1 (MQ=255)
                                                                         aCAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTggg                <  1:1622126/93‑1 (MQ=255)
                                                                          cAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGGCCGTCTgggg               <  2:1487947/93‑1 (MQ=255)
                                                                          cAACTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTgggg               <  1:8307384/93‑1 (MQ=255)
                                                                           aaCTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGc              <  2:5219877/93‑1 (MQ=255)
                                                                           aaCTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGc              <  1:4342700/93‑1 (MQ=255)
                                                                           aaCTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGc              <  2:1201188/93‑1 (MQ=255)
                                                                            aCTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGTCCGTCTGGGGcc             >  2:3595656/1‑93 (MQ=255)
                                                                            aCTGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGcc             >  2:6634163/1‑93 (MQ=255)
                                                                              tGGCTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGa           <  1:3828302/93‑1 (MQ=255)
                                                                                 cTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAgcg        <  1:7228270/93‑1 (MQ=255)
                                                                                 cTTTCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAg          >  2:3057644/1‑91 (MQ=255)
                                                                                  tttCTCACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAgcgc       >  1:4488650/1‑93 (MQ=255)
                                                                                     ctcACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAGCGCGAt    <  2:6267976/93‑1 (MQ=255)
                                                                                      tcACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAGCGCGATg   <  2:2194194/93‑1 (MQ=255)
                                                                                      tcACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAGCGCGATg   >  2:8578887/1‑93 (MQ=255)
                                                                                       cACCGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAGCGCGATGc  <  2:3745768/93‑1 (MQ=255)
                                                                                          |                                                                                         
AGTTTGGTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACTGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAGCGCGATGC  >  NC_000913/1038296‑1038475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: