BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,053,820	T→C	T518A (ACC→GCC)	torS ←	TorS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,053,820	0	T	C	100.0%	989.6 / NA	287	T518A (ACC→GCC)	torS	TorS
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/164); total (123/164)

Only 100 of 292 total aligned reads displayed.

CGCCCATTAACGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGTACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCGAGAATAT  >  NC_000913/1053730‑1053909

cGCCCATTAACGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCAc                                                                                         <  2:465222/93‑1 (MQ=255)

cGCCCATTAACGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCAc                                                                                         <  1:1324822/93‑1 (MQ=255)

cGCCCATTAACGCGCACGGCATATCATCGGCAAGTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCAc                                                                                         <  1:8523606/93‑1 (MQ=255)

   ccATTAACGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACttt                                                                                      >  2:191086/1‑93 (MQ=255)

    cATTAACGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTc                                                                                     >  2:7112788/1‑93 (MQ=255)

     aTTAACGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTcc                                                                                    >  2:1556201/1‑93 (MQ=255)

      ttAACGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCca                                                                                   >  1:4117031/1‑93 (MQ=255)

      ttAACGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCca                                                                                   >  2:3818564/1‑93 (MQ=255)

       tAACGCGCACAGCATATCATCGGCAATTGCCGTTTCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCcag                                                                                  <  1:2092112/93‑1 (MQ=255)

        aaCGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCcagc                                                                                 <  1:6354943/93‑1 (MQ=255)

        aaCGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCcagc                                                                                 >  1:4255532/1‑93 (MQ=255)

        aaCGCGCACGGCATATCATCGGCAACTGCCGTTACCAGGCGAATCGGGCGACCTTTCGCCCGTCCGCTCATTAATTGCAGGGCACTTTCcagc                                                                                 <  2:1607175/93‑1 (MQ=255)

         aCGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCcagca                                                                                >  2:2737979/1‑93 (MQ=255)

          cgcgCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCcagcag                                                                               <  2:5435824/93‑1 (MQ=255)

           ccgcgcgCCATATCATCGGCAATTGCCGTTGCAAGGCGAATCGGGCGCCCTTTCGCCCGTCCGCTCATTAATTGCAGGGCACTTTCCagcagc                                                                              <  2:3423845/92‑1 (MQ=255)

               aCGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGgc                                                                          >  2:5400343/1‑93 (MQ=255)

               aCGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGgc                                                                          >  1:5708390/1‑93 (MQ=255)

                cGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGgcg                                                                         >  1:5257184/1‑93 (MQ=255)

                   cATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCgg                                                                      <  1:5438724/93‑1 (MQ=255)

                    atatCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGt                                                                     >  1:2572394/1‑93 (MQ=255)

                     tatCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGtc                                                                    >  2:6843615/1‑92 (MQ=255)

                     tatCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCACCAGCGGGCGCGGtc                                                                    >  1:4950674/1‑92 (MQ=255)

                        catcGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCaa                                                                 <  2:2455930/93‑1 (MQ=255)

                         atcGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCaaa                                                                <  1:3258651/93‑1 (MQ=255)

                          tcGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAg                                                               <  2:2154856/93‑1 (MQ=255)

                          tcGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAg                                                               >  2:6737315/1‑93 (MQ=255)

                          tcGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAg                                                               <  1:2170570/93‑1 (MQ=255)

                          tcGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAg                                                               <  2:5859772/93‑1 (MQ=255)

                          tcGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGCTCAAAg                                                               >  2:4080292/1‑93 (MQ=255)

                           cGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAgg                                                              <  1:903626/93‑1 (MQ=255)

                            ggCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAggg                                                             >  1:6943929/1‑93 (MQ=255)

                            ggCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTACAGCAGCGGGCGCGGTTCAAAggg                                                             <  1:1529001/93‑1 (MQ=255)

                               aaTTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTc                                                          >  1:7316754/1‑93 (MQ=255)

                               aaTTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTc                                                          <  1:8585517/93‑1 (MQ=255)

                                 ttGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCAt                                                        <  2:1355707/93‑1 (MQ=255)

                                 ttGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCAt                                                        <  1:767858/93‑1 (MQ=255)

                                  tGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATc                                                       <  1:8441568/93‑1 (MQ=255)

                                  tGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATc                                                       <  2:5709287/93‑1 (MQ=255)

                                  tGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATc                                                       <  2:6458521/93‑1 (MQ=255)

                                   gCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCg                                                      >  2:7216570/1‑93 (MQ=255)

                                    ccGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGc                                                     >  1:4683561/1‑93 (MQ=255)

                                    ccGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGc                                                     <  1:4543366/93‑1 (MQ=255)

                                    ccGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGc                                                     <  2:8565365/93‑1 (MQ=255)

                                     cGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCt                                                    >  2:523566/1‑93 (MQ=255)

                                     cGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCt                                                    >  2:869957/1‑93 (MQ=255)

                                     cGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCt                                                    <  1:1191317/93‑1 (MQ=255)

                                      gTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTg                                                   >  1:7947785/1‑93 (MQ=255)

                                      gTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTg                                                   >  1:6977406/1‑93 (MQ=255)

                                      gTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTg                                                   <  2:2979778/93‑1 (MQ=255)

                                       ttaccAGGCGAATCGGGCGACCTTTCCCCCGTCCGCTCATTAATTGCAGGGCGCTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGa                                                  <  2:6573653/90‑1 (MQ=255)

                                        tGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGAc                                                 <  1:8308567/93‑1 (MQ=255)

                                        tGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGAc                                                 <  1:168453/93‑1 (MQ=255)

                                          ccAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCTAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCg                                               >  2:5118946/1‑93 (MQ=255)

                                           cAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGa                                              >  1:3841939/1‑93 (MQ=255)

                                           cAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGa                                              >  1:4322750/1‑93 (MQ=255)

                                             ggCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGaaa                                            <  1:8110380/93‑1 (MQ=255)

                                             ggCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGaaa                                            >  1:2854941/1‑93 (MQ=255)

                                             ggCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGaaa                                            >  2:4150101/1‑93 (MQ=255)

                                              gCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAAc                                           <  1:6015375/93‑1 (MQ=255)

                                              gCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAAc                                           <  1:1816095/93‑1 (MQ=255)

                                               cGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACa                                          <  1:3565717/93‑1 (MQ=255)

                                                gAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACAt                                         >  1:962578/1‑93 (MQ=255)

                                                 aaTCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACAtt                                        >  2:7544248/1‑93 (MQ=255)

                                                  aTCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTc                                       >  1:4905008/1‑93 (MQ=255)

                                                   tCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCt                                      >  1:3078901/1‑93 (MQ=255)

                                                   tCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCt                                      <  2:2582575/93‑1 (MQ=255)

                                                   tCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCt                                      <  1:5206203/93‑1 (MQ=255)

                                                   tCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCt                                      <  1:8715738/93‑1 (MQ=255)

                                                        cGACCTTTCAGCCGGCCGCCCATTAATTGCAGGGCACTTTTCAGCAGCGGGGGCGGTTCAAAGGGCTCAACGCTGACCGAAACATTCTTGCCa                                 >  2:2828489/1‑93 (MQ=255)

                                                         gACCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCAc                                <  2:8518178/93‑1 (MQ=255)

                                                          tccTTTCACCCGTCCGCTCATTAATTGCAGGTCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCAcc                               <  1:6851182/92‑1 (MQ=255)

                                                          gccTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCAcc                               <  1:2759606/92‑1 (MQ=255)

                                                          gccTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCAcc                               <  2:7851579/92‑1 (MQ=255)

                                                          aCCTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCAcc                               <  1:7079666/93‑1 (MQ=255)

                                                           ccTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCt                              <  2:6309916/93‑1 (MQ=255)

                                                           ccTTTCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCt                              <  1:2904487/93‑1 (MQ=255)

                                                               tCACCCGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCtt                          >  2:8167312/1‑93 (MQ=255)

                                                                   ccGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGAt                      <  2:1062958/93‑1 (MQ=255)

                                                                   ccGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGAt                      >  2:6234166/1‑93 (MQ=255)

                                                                    cGTCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATa                     <  1:6775375/93‑1 (MQ=255)

                                                                      tCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGc                   <  1:1077801/93‑1 (MQ=255)

                                                                      tCCGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGc                   <  1:7747319/93‑1 (MQ=255)

                                                                       ccGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCg                  >  1:3961334/1‑93 (MQ=255)

                                                                       ccGCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCg                  >  2:2753729/1‑93 (MQ=255)

                                                                       ccGCTCATTAATTGCAGGGCACTTGCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCg                  <  2:6763117/93‑1 (MQ=255)

                                                                        cGCTCATNAAGTGCAGGGCANNTNCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCgg                 <  1:2452243/93‑1 (MQ=255)

                                                                         gCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGa                >  1:6574176/1‑93 (MQ=255)

                                                                         gCTCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGa                <  2:328837/93‑1 (MQ=255)

                                                                           tCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGaat              <  2:5137529/93‑1 (MQ=255)

                                                                           tCATTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGaat              >  2:1686094/1‑93 (MQ=255)

                                                                             aTTAATTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGaataa            >  1:2299247/1‑93 (MQ=255)

                                                                                 aTTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATATCGGAATAATCga        >  2:3779285/1‑93 (MQ=255)

                                                                                 aTTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCga        >  1:2524061/1‑93 (MQ=255)

                                                                                 aTTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCga        >  1:6140494/1‑93 (MQ=255)

                                                                                 aTTGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCga        <  2:8324700/93‑1 (MQ=255)

                                                                                   tGCAGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCgaga      <  2:4206302/93‑1 (MQ=255)

                                                                                   tGCAGGGCACGTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCgaga      <  2:7611516/93‑1 (MQ=255)

                                                                                      aGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCGAGAata   >  2:7428397/1‑93 (MQ=255)

                                                                                      aGGGCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCGAGAata   <  2:3121176/93‑1 (MQ=255)

                                                                                       gggCACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCGAGAatat  >  2:1236303/1‑93 (MQ=255)

CGCCCATTAACGCGCACGGCATATCATCGGCAATTGCCGTTGCCAGGCGAATCGGGCGACCTTTCACCCGTCCGCTCATTAATTGCAGGGTACTTTCCAGCAGCGGGCGCGGTTCAAAGGGCTCATCGCTGACCGAAACATTCTTGCCACCTGCTTCGATAGCGGAATAATCGAGAATAT  >  NC_000913/1053730‑1053909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`