Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,086,330 T→C Y247C (TAC→TGC)  ycdQ ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,086,3300TC100.0% 893.7 / NA 258Y247C (TAC→TGC) ycdQhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (121/137);  total (121/137)

Only 100 of 265 total aligned reads displayed.

GTGCCCGTGGCTCGTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGTAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTCGCTTG  >  NC_000913/1086241‑1086419
                                                                                         |                                                                                         
   cccGTGGCTCGTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCa                                                                                     >  1:4331386/1‑93 (MQ=255)
    ccGTGGCTCGTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCAc                                                                                    <  2:402983/93‑1 (MQ=255)
     cGTGGCTCGTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACt                                                                                   <  2:7560138/93‑1 (MQ=255)
       tgtcTCGTAAAAAATCGTCCAATGATTCAACTGCAGCTTCCAGCTAATATCAATACCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTc                                                                                 <  2:7413979/90‑1 (MQ=255)
        ggCTCGTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCt                                                                                <  1:3957683/93‑1 (MQ=255)
          cTCGTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGc                                                                              <  1:7704767/93‑1 (MQ=255)
          cTCGTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGc                                                                              >  1:3310088/1‑93 (MQ=255)
             gTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCATCCCACTTCTGCCAg                                                                           >  2:3519879/1‑93 (MQ=255)
             gTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAg                                                                           >  1:1044217/1‑93 (MQ=255)
             gTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAg                                                                           <  2:1025968/93‑1 (MQ=255)
              tAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAgg                                                                          >  1:2022560/1‑93 (MQ=255)
              tAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAgg                                                                          >  1:808433/1‑93 (MQ=255)
               aaaaaaTCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAggg                                                                         >  1:1914319/1‑93 (MQ=255)
               aaaaaaTCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAggg                                                                         <  2:4713904/93‑1 (MQ=255)
                aaaaaTCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGgc                                                                        <  1:6923887/93‑1 (MQ=255)
                 aaaaTCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGgcg                                                                       >  2:3236629/1‑93 (MQ=255)
                  aaaTCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGgcgc                                                                      >  2:6185060/1‑93 (MQ=255)
                  aaaTCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGgcgc                                                                      >  1:891361/1‑93 (MQ=255)
                  aaaTCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGgcgc                                                                      <  2:7688423/93‑1 (MQ=255)
                   aaTCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCt                                                                     >  2:4327806/1‑93 (MQ=255)
                    atagTCCACTGCTTCACCTGCAGCTTCCAGCTAATATCAATAGCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTg                                                                    <  2:5888629/90‑1 (MQ=255)
                    aTCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTg                                                                    >  2:3780152/1‑93 (MQ=255)
                      cGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGcg                                                                  <  2:6607858/93‑1 (MQ=255)
                       gTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGcga                                                                 <  2:144353/93‑1 (MQ=255)
                        tCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGcgac                                                                <  1:5924708/93‑1 (MQ=255)
                         ccACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGcgacg                                                               >  2:784761/1‑93 (MQ=255)
                          cACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGcgacga                                                              <  1:3704011/93‑1 (MQ=255)
                           aCTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGaa                                                             >  1:2919288/1‑93 (MQ=255)
                            cTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGaaa                                                            >  1:1163250/1‑93 (MQ=255)
                            cTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGaaa                                                            >  2:2460475/1‑93 (MQ=255)
                             tGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAAt                                                           >  1:748432/1‑93 (MQ=255)
                              gATTCAACTGCAGCTTCTAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATg                                                          >  1:5313993/1‑93 (MQ=255)
                              gATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATg                                                          <  2:6015877/93‑1 (MQ=255)
                               aTTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGc                                                         <  1:1675162/93‑1 (MQ=255)
                               aTTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGc                                                         <  2:121319/93‑1 (MQ=255)
                               aTTCAACTGCAGCTTCCAGCTAATAACAATATCTTCGGTTATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGc                                                         <  2:749910/93‑1 (MQ=255)
                                ttCAACTGCAGCTTCCAGCTAATATCAATATCTTTGGTGATCATATCGTCACTCCAGCAACCCACTTCTTCCAGGGCGCTCCGACGAAATGCg                                                        >  2:2372613/1‑93 (MQ=255)
                                ttCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCg                                                        >  1:5613391/1‑93 (MQ=255)
                                ttCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCg                                                        >  1:5113679/1‑93 (MQ=255)
                                  cAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGc                                                      >  2:5846/1‑93 (MQ=255)
                                  cAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGc                                                      <  1:3052452/93‑1 (MQ=255)
                                   aaCTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACTAAATGCGGCa                                                     <  1:1109532/93‑1 (MQ=255)
                                   aaCTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCa                                                     >  2:6715064/1‑93 (MQ=255)
                                    aCTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCaa                                                    <  1:2609366/93‑1 (MQ=255)
                                     cTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAAt                                                   <  2:2015750/93‑1 (MQ=255)
                                        cAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAac                                                <  1:1476807/93‑1 (MQ=255)
                                        cAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAac                                                <  1:6363092/93‑1 (MQ=255)
                                          gCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAacac                                              >  1:732466/1‑93 (MQ=255)
                                          gCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAacac                                              >  1:8674513/1‑93 (MQ=255)
                                             tCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCgg                                           <  2:3072593/93‑1 (MQ=255)
                                             tCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCgg                                           <  2:916602/93‑1 (MQ=255)
                                               cAGCTAATATTAATATCTTCGGTGATCATATCTTCACTCCAGCAACCTACTACTGCCAGTGCGCTGCGACGAAATGCGGCAATAACACCGGaa                                         >  1:7782816/1‑93 (MQ=255)
                                               cAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGaa                                         >  2:5004330/1‑93 (MQ=255)
                                                aGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGaaa                                        >  1:3389471/1‑93 (MQ=255)
                                                 gCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAAc                                       <  2:3406514/93‑1 (MQ=255)
                                                   tAATATCAATATCTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACgg                                     >  1:4054219/1‑93 (MQ=255)
                                                    aatatcaatatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACgga                                    >  1:5495021/1‑92 (MQ=255)
                                                    aatatcaatatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGt                                    <  2:5395699/93‑1 (MQ=255)
                                                     atatcaatatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTa                                   <  1:6094322/93‑1 (MQ=255)
                                                        tcaatatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTCAAt                                >  2:4586544/1‑93 (MQ=255)
                                                        tcaatatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAAt                                >  2:2738841/1‑93 (MQ=255)
                                                         caatatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATa                               >  2:721888/1‑93 (MQ=255)
                                                         caatatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATa                               >  2:5161966/1‑93 (MQ=255)
                                                           atatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACg                             >  1:7426567/1‑93 (MQ=255)
                                                            tatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGt                            <  2:3201481/93‑1 (MQ=255)
                                                            tatcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCAGCAATAACACCGGAAACGGTAAATACGt                            >  2:8586207/1‑93 (MQ=255)
                                                             atcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGtt                           <  1:3766662/93‑1 (MQ=255)
                                                             atcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGtt                           >  1:1573763/1‑93 (MQ=255)
                                                             atcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGtt                           <  1:8583204/93‑1 (MQ=255)
                                                              tcTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGttt                          <  1:3088703/93‑1 (MQ=255)
                                                               cTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTc                         <  2:8377022/93‑1 (MQ=255)
                                                               cTTCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTc                         >  1:6734387/1‑93 (MQ=255)
                                                               cTTCGGTGATCATATCCGCGCTCCAGCAACCCCCTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTc                         <  1:4534059/93‑1 (MQ=255)
                                                                ttCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTcc                        <  2:2586443/93‑1 (MQ=255)
                                                                ttCGGTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTcc                        <  1:3858390/93‑1 (MQ=255)
                                                                    gTGATCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAg                    <  1:1253076/93‑1 (MQ=255)
                                                                       aTCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATa                 <  1:5131380/93‑1 (MQ=255)
                                                                       aTCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATa                 >  1:5372746/1‑93 (MQ=255)
                                                                       aTCATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATa                 >  1:6247888/1‑93 (MQ=255)
                                                                         cATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACg               >  2:6160776/1‑93 (MQ=255)
                                                                         cATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACg               >  2:1294353/1‑93 (MQ=255)
                                                                         cATATCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACg               >  2:5645969/1‑93 (MQ=255)
                                                                          atatCGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGc              <  1:2121326/93‑1 (MQ=255)
                                                                          atatCGTCACTACTGCAACCCGCTTCTGCCAGGGCGCTGCGACGAAATGCGGCACTAACACCGGAAACGGTAAATACGTTTCCATAGATACGc              <  1:4618580/93‑1 (MQ=255)
                                                                             tCGTCACTCCAGCAACCAACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTgg           >  2:8639891/1‑93 (MQ=255)
                                                                              cGTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTggg          <  1:1708229/93‑1 (MQ=255)
                                                                               gTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGt         <  2:2928256/93‑1 (MQ=255)
                                                                               gTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGt         >  2:6801587/1‑93 (MQ=255)
                                                                               gTCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGt         >  2:6978496/1‑93 (MQ=255)
                                                                                tCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGtt        >  1:3725428/1‑93 (MQ=255)
                                                                                tCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGtt        <  2:5683226/93‑1 (MQ=255)
                                                                                tCACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGtt        <  2:1053496/93‑1 (MQ=255)
                                                                                 cACTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTc       >  1:6304608/1‑93 (MQ=255)
                                                                                  aCTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTCg      >  2:1708685/1‑93 (MQ=255)
                                                                                  aCTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTCg      >  2:7966083/1‑93 (MQ=255)
                                                                                  aCTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTCg      >  1:4908459/1‑93 (MQ=255)
                                                                                   cTCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTCGc     >  1:7070757/1‑93 (MQ=255)
                                                                                    tCCAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTCGCt    <  2:2329639/93‑1 (MQ=255)
                                                                                     ccAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTCGCtt   >  1:2525886/1‑93 (MQ=255)
                                                                                      cAGCAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTCGCTTg  <  2:6427055/93‑1 (MQ=255)
                                                                                         |                                                                                         
GTGCCCGTGGCTCGTAAAAAATCGTCCACTGATTCAACTGCAGCTTCCAGCTAATATCAATATCTTCGGTGATCATATCGTCACTCCAGTAACCCACTTCTGCCAGGGCGCTGCGACGAAATGCGGCAATAACACCGGAAACGGTAAATACGTTTCCATAGATACGCTGGGTTCGCTTG  >  NC_000913/1086241‑1086419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: