BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,098,156	A→G	T19A (ACA→GCA)	ycdX →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,098,156	0	A	G	99.6%	922.0 / ‑5.1	266	T19A (ACA→GCA)	ycdX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (124/141); total (124/142)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.91e-01

Only 100 of 271 total aligned reads displayed.

GCTATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGCGCCG  >  NC_000913/1098066‑1098245

  tATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCAtt                                                                                       >  2:3639629/1‑93 (MQ=255)

   aTCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTa                                                                                      >  1:2807029/1‑93 (MQ=255)

    tCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTaa                                                                                     <  1:767518/93‑1 (MQ=255)

    tCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTaa                                                                                     >  1:2579877/1‑93 (MQ=255)

    tCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTaa                                                                                     >  2:2768877/1‑93 (MQ=255)

     ccTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAg                                                                                    <  1:5461790/93‑1 (MQ=255)

     ccTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAg                                                                                    >  2:6083269/1‑93 (MQ=255)

      cTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGt                                                                                   <  1:139275/93‑1 (MQ=255)

      cTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGt                                                                                   <  2:4473114/93‑1 (MQ=255)

       ttGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTg                                                                                  <  2:4507533/93‑1 (MQ=255)

        tGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGa                                                                                 <  2:1703945/93‑1 (MQ=255)

        tGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGa                                                                                 >  2:6049151/1‑93 (MQ=255)

         ggCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGAt                                                                                <  2:7676168/93‑1 (MQ=255)

          gCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGAtt                                                                               <  1:3983049/93‑1 (MQ=255)

           cGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTa                                                                              <  1:6897641/93‑1 (MQ=255)

           cGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTa                                                                              <  1:3560498/93‑1 (MQ=255)

            gggAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTAc                                                                             <  2:6464459/93‑1 (MQ=255)

              gAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACAt                                                                           <  1:7092554/93‑1 (MQ=255)

              gAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACAt                                                                           <  1:8157501/93‑1 (MQ=255)

              gAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACAt                                                                           <  2:4458989/93‑1 (MQ=255)

               aaTTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACAtt                                                                          <  2:511604/93‑1 (MQ=255)

                aTTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTg                                                                         <  1:5798601/93‑1 (MQ=255)

                 ttGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGc                                                                        >  1:7555964/1‑93 (MQ=255)

                 atGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGc                                                                        <  2:6839746/92‑1 (MQ=255)

                    aaTACCGGAGAGAATTTTGTATCCCCTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCa                                                                     <  1:8528841/93‑1 (MQ=255)

                    aaTACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCa                                                                     <  2:1474734/93‑1 (MQ=255)

                     aTACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAg                                                                    >  1:4673029/1‑93 (MQ=255)

                     aTACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAg                                                                    >  1:1117198/1‑93 (MQ=255)

                     aTACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAg                                                                    >  2:8320194/1‑93 (MQ=255)

                     aTACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAg                                                                    >  2:7298303/1‑93 (MQ=255)

                        cAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGcc                                                                 >  2:4100351/1‑93 (MQ=255)

                         aGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCca                                                                <  2:3233267/93‑1 (MQ=255)

                          ggAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCcaa                                                               <  1:8597252/93‑1 (MQ=255)

                             gagagTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCcaaaca                                                            <  2:6143075/93‑1 (MQ=255)

                             gagagTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCcaaaca                                                            >  2:2727861/1‑93 (MQ=255)

                              agagTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCcaaacaa                                                           >  2:7125253/1‑93 (MQ=255)

                                 gTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAg                                                        >  1:6129993/1‑93 (MQ=255)

                                 gTTATCTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATGGCCCAGGCCAAACAAAAg                                                        <  2:3768872/93‑1 (MQ=255)

                                  ttATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAgg                                                       >  1:157206/1‑93 (MQ=255)

                                   tATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAggg                                                      >  2:8141411/1‑93 (MQ=255)

                                    aTGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGc                                                     >  2:5772408/1‑93 (MQ=255)

                                     tGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCa                                                    >  1:1032613/1‑93 (MQ=255)

                                     tGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCa                                                    <  1:452052/93‑1 (MQ=255)

                                         tCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTaa                                                >  1:299738/1‑93 (MQ=255)

                                          cccGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTaaa                                               >  2:1543922/1‑93 (MQ=255)

                                          cccGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTaaa                                               >  1:5046730/1‑93 (MQ=255)

                                           ccGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTaaat                                              >  2:7478918/1‑92 (MQ=255)

                                           ccGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAAc                                              <  1:1707410/93‑1 (MQ=255)

                                             gTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACtt                                            <  2:4979028/93‑1 (MQ=255)

                                             gTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACtt                                            <  2:3406849/93‑1 (MQ=255)

                                              tCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACttt                                           >  1:6614052/1‑93 (MQ=255)

                                               cgtccTTCATATGCATACCATTGCCAACACACATGCATGTAGCGCATTAAGTAATTACATTGCCCAAACCAGACATAAGAGCATTAAACttta                                          <  2:7835914/90‑2 (MQ=255)

                                                gACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACttttt                                         <  1:942274/93‑1 (MQ=255)

                                                gACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACttttt                                         <  2:7957373/93‑1 (MQ=255)

                                                 aCCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTg                                        <  2:1993913/93‑1 (MQ=255)

                                                  ccTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGc                                       <  2:5835120/93‑1 (MQ=255)

                                                  ccTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGc                                       <  1:6517989/93‑1 (MQ=255)

                                                   cTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCg                                      >  1:6754260/1‑93 (MQ=255)

                                                    ttCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGa                                     >  1:5898338/1‑93 (MQ=255)

                                                     tCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGAt                                    >  2:2312092/1‑93 (MQ=255)

                                                     tCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGAt                                    <  1:5828285/93‑1 (MQ=255)

                                                      cATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATc                                   >  2:3048193/1‑93 (MQ=255)

                                                       atatGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCa                                  <  1:1096446/93‑1 (MQ=255)

                                                       atatGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCa                                  >  2:6898432/1‑93 (MQ=255)

                                                        tatGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCAc                                 <  1:2188089/93‑1 (MQ=255)

                                                        tatGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCAc                                 >  1:7163937/1‑93 (MQ=255)

                                                         atGCATACCGTTGCCAGCACACATGCATATAGCGAATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCAcc                                >  1:5681/1‑93 (MQ=255)

                                                             aTACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATc                            <  2:4598711/93‑1 (MQ=255)

                                                             aTACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATc                            <  2:432553/93‑1 (MQ=255)

                                                              tACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCa                           <  1:2678447/93‑1 (MQ=255)

                                                                 cGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATgg                        >  1:8386595/1‑93 (MQ=255)

                                                                  gTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGc                       >  1:5226893/1‑93 (MQ=255)

                                                                  gTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGc                       >  1:3642750/1‑93 (MQ=255)

                                                                   ttGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGcc                      >  1:7933957/1‑93 (MQ=255)

                                                                   ttGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGcc                      <  1:8094315/93‑1 (MQ=255)

                                                                    tGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGccc                     <  1:3337414/93‑1 (MQ=255)

                                                                     gCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCg                    <  2:2146079/93‑1 (MQ=255)

                                                                     gCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCg                    <  2:5599091/93‑1 (MQ=255)

                                                                       cAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGa                  <  1:4782774/93‑1 (MQ=255)

                                                                           acacaTGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATg              >  1:5597761/1‑93 (MQ=255)

                                                                             acaTGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGa            <  1:2826933/93‑1 (MQ=255)

                                                                              caTGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGaa           >  2:8545896/1‑93 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTATACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGa         <  1:7043784/93‑1 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGa         <  2:380991/93‑1 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGa         <  2:5384272/93‑1 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGa         <  1:4275892/93‑1 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGa         <  2:1306524/93‑1 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGa         <  2:1291831/93‑1 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTCTGCGATCACCGATCATGGCCCGGATATGGCAGa         >  1:6479652/1‑93 (MQ=255)

                                                                                 gCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGAt        <  2:7546125/93‑1 (MQ=255)

                                                                                  cATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATg       <  1:1941577/93‑1 (MQ=255)

                                                                                  cATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATg       <  1:328485/93‑1 (MQ=255)

                                                                                  cATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATg       <  1:6984067/93‑1 (MQ=255)

                                                                                  cATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATg       <  2:187342/93‑1 (MQ=255)

                                                                                    tataGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgcg     >  1:4419011/1‑93 (MQ=255)

                                                                                     ataGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgcgc    >  2:7351586/1‑93 (MQ=255)

                                                                                     ataGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgcgc    <  2:1124485/93‑1 (MQ=255)

                                                                                     ataGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgcgc    >  2:6304399/1‑93 (MQ=255)

                                                                                      taGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGcgcc   <  2:2479947/93‑1 (MQ=255)

                                                                                       aGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGcgccc  >  2:2169303/1‑92 (MQ=255)

GCTATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGCGCCG  >  NC_000913/1098066‑1098245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`