BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,383,611	A→G	Q26R (CAG→CGG)	ycjF →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,383,611	0	A	G	100.0%	904.1 / NA	262	Q26R (CAG→CGG)	ycjF	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (137/125); total (137/125)

Only 100 of 294 total aligned reads displayed.

GGAGATAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCAGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGCGGTAA  >  NC_000913/1383521‑1383700

ggAGATAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCgcggc                                                                                         >  1:4920333/1‑93 (MQ=255)

ggAGATAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCgcggc                                                                                         >  1:4327311/1‑93 (MQ=255)

ggAGATAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCgcggc                                                                                         <  2:652095/93‑1 (MQ=255)

 gagaTAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCgcggca                                                                                        >  1:8664784/1‑93 (MQ=255)

  agaTAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGcggcag                                                                                       <  2:2291276/93‑1 (MQ=255)

  agaTAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGcggcag                                                                                       <  2:7455461/93‑1 (MQ=255)

  agaTAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGcggcag                                                                                       >  1:7865641/1‑93 (MQ=255)

  agaTAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTAAGGGCGcggcag                                                                                       >  1:7070663/1‑93 (MQ=255)

   gaTAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGa                                                                                      <  2:442788/93‑1 (MQ=255)

     tAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGAcc                                                                                    >  1:3901999/1‑93 (MQ=255)

     tAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGAcc                                                                                    <  1:4819381/93‑1 (MQ=255)

      aaaTTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCt                                                                                   <  1:758192/93‑1 (MQ=255)

      aaaTTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCt                                                                                   <  2:6562058/93‑1 (MQ=255)

         ttGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTg                                                                                <  1:2827369/93‑1 (MQ=255)

           gCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGAc                                                                              <  1:6821496/93‑1 (MQ=255)

           gCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGAc                                                                              <  1:2554375/93‑1 (MQ=255)

             gATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGa                                                                            >  1:1479764/1‑93 (MQ=255)

             gATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGa                                                                            >  1:540684/1‑93 (MQ=255)

             gATGACCGAACCGTTAAAACCACGTATCGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGa                                                                            >  1:3427288/1‑93 (MQ=255)

              aTGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGaa                                                                           >  1:2737451/1‑93 (MQ=255)

               tGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGaaa                                                                          <  2:8012187/93‑1 (MQ=255)

                   cGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCa                                                                      <  1:6119754/93‑1 (MQ=255)

                    gAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAg                                                                     >  1:7657255/1‑93 (MQ=255)

                     aaCCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAgg                                                                    >  2:6134437/1‑93 (MQ=255)

                     aaCCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAgg                                                                    >  1:2340950/1‑93 (MQ=255)

                      aCCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGgc                                                                   >  2:1545119/1‑93 (MQ=255)

                      aCCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGgc                                                                   >  2:4576478/1‑93 (MQ=255)

                         gTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCa                                                                >  2:112162/1‑93 (MQ=255)

                           tAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCaaa                                                              >  1:1790228/1‑93 (MQ=255)

                             aaaCCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAAt                                                            <  2:2606148/93‑1 (MQ=255)

                                 cACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTg                                                        >  1:5901182/1‑93 (MQ=255)

                                 cACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTg                                                        >  2:6865173/1‑93 (MQ=255)

                                 cACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAAGCGCAAAATTTTg                                                        >  1:3278961/1‑93 (MQ=255)

                                   cGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGcc                                                      >  2:8592695/1‑93 (MQ=255)

                                    gTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGccc                                                     <  2:4852396/93‑1 (MQ=255)

                                     tATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGcccc                                                    >  1:3593383/1‑93 (MQ=255)

                                      aTTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAGAATCAGGCGCAAAATTTTGCCCCg                                                   >  1:214398/1‑93 (MQ=255)

                                      aTTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCg                                                   >  1:6275393/1‑93 (MQ=255)

                                       ttGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCgg                                                  <  1:1037055/93‑1 (MQ=255)

                                       ttGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCgg                                                  >  2:1954444/1‑93 (MQ=255)

                                        tGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGc                                                 >  2:491563/1‑93 (MQ=255)

                                         taTTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGTCCTTTGACGAAAATCAGGCGCAAAATTTTTCCCCGGcc                                                <  2:3222094/92‑1 (MQ=255)

                                           tttCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCAc                                              >  1:4187250/1‑93 (MQ=255)

                                             tCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGc                                            <  1:4053118/93‑1 (MQ=255)

                                             tCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGc                                            <  2:6282903/93‑1 (MQ=255)

                                              cGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCt                                           >  2:5446707/1‑93 (MQ=255)

                                              cGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCt                                           >  2:8814773/1‑93 (MQ=255)

                                               gACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTc                                          <  1:6530715/93‑1 (MQ=255)

                                               gACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTc                                          <  1:1373504/93‑1 (MQ=255)

                                               gACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTc                                          <  1:5689766/93‑1 (MQ=255)

                                               gACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAACCAGGCGCAAAATTTTGCCCCGGCCACGcca                                          >  2:2021858/1‑91 (MQ=255)

                                                aCGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTcg                                         >  1:3932778/1‑93 (MQ=255)

                                                  ggTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTcgac                                       >  2:4744589/1‑93 (MQ=255)

                                                   gTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTcgacg                                      <  2:1447636/93‑1 (MQ=255)

                                                     ccTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGaa                                    <  1:5118485/93‑1 (MQ=255)

                                                      ctctGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAg                                   <  1:4959030/93‑1 (MQ=255)

                                                       tctGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAgc                                  <  1:729445/93‑1 (MQ=255)

                                                       tctGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAgc                                  <  2:3709641/93‑1 (MQ=255)

                                                       tctGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAgc                                  <  2:3527379/93‑1 (MQ=255)

                                                        ctGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAgcg                                 <  1:5354685/93‑1 (MQ=255)

                                                         tGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAgcgc                                >  1:1494179/1‑93 (MQ=255)

                                                         tGGAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAgcgc                                <  2:7326210/93‑1 (MQ=255)

                                                          ggAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCa                               <  2:721007/93‑1 (MQ=255)

                                                           gAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAg                              <  1:7461717/93‑1 (MQ=255)

                                                           gAGGTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAg                              >  1:2960600/1‑93 (MQ=255)

                                                             ggTCGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGga                            >  2:2963815/1‑93 (MQ=255)

                                                                cGATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGgaaga                         <  1:1602369/93‑1 (MQ=255)

                                                                cGATCAGAATCCTAAATTCA‑GGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGgaagaa                        <  2:5405251/93‑1 (MQ=255)

                                                                 gATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGgaagaa                        >  2:320261/1‑93 (MQ=255)

                                                                 gATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGgaagaa                        >  1:3089902/1‑93 (MQ=255)

                                                                 gATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGgaagaa                        >  2:5737219/1‑93 (MQ=255)

                                                                 gATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGgaagaa                        <  1:3980762/93‑1 (MQ=255)

                                                                 gATCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGgaagaa                        >  2:512497/1‑93 (MQ=255)

                                                                  aTCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGaagaag                       >  2:6657339/1‑93 (MQ=255)

                                                                   tCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAagaaga                      >  1:4762307/1‑93 (MQ=255)

                                                                   tCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAagaaga                      <  1:3498650/93‑1 (MQ=255)

                                                                   tCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAagaaga                      >  1:5588559/1‑93 (MQ=255)

                                                                   tCAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCAGGCCACGCTCGCCGACGCGCAGGAagacga                      >  1:81146/1‑93 (MQ=255)

                                                                    cAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAagag                     >  2:4107205/1‑93 (MQ=255)

                                                                    cAGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAagag                     <  2:1017357/93‑1 (MQ=255)

                                                                     cgAATCCCAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAgg                    <  1:8571508/92‑1 (MQ=255)

                                                                     aGAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCCCGCTCGACGAAGCGCAGGAAGAAGAgg                    <  1:5812504/93‑1 (MQ=255)

                                                                      gAATCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAggg                   <  2:3893398/93‑1 (MQ=255)

                                                                       aaTCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAgggg                  <  2:7003005/93‑1 (MQ=255)

                                                                       aaTCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAgggg                  >  2:583599/1‑93 (MQ=255)

                                                                         tCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCa                >  1:8379830/1‑93 (MQ=255)

                                                                         tCCTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCa                <  1:6592256/93‑1 (MQ=255)

                                                                          ccTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCaa               >  1:4657349/1‑93 (MQ=255)

                                                                           cTAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAg              <  1:8818432/93‑1 (MQ=255)

                                                                            tAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGt             <  1:1287487/93‑1 (MQ=255)

                                                                            tAAATTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGt             <  2:4207483/93‑1 (MQ=255)

                                                                             aaaTTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTc            >  2:4994763/1‑93 (MQ=255)

                                                                               aTTCAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGa          <  1:5959236/93‑1 (MQ=255)

                                                                                 tCAGGGCGCGACAGAACTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAg        <  2:7807857/93‑1 (MQ=255)

                                                                                  cAGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGc       >  1:4468308/1‑93 (MQ=255)

                                                                                   aGGGCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGCg      >  1:6470651/1‑93 (MQ=255)

                                                                                    gggCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGCgg     >  2:4330857/1‑93 (MQ=255)

                                                                                     ggCGCGGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGCGGt    <  1:2430196/93‑1 (MQ=255)

                                                                                       cgcgGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGCGGTaa  <  2:7119644/93‑1 (MQ=255)

                                                                                       cgcgGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGCGGTaa  <  1:4399579/93‑1 (MQ=255)

GGAGATAAATTGCGATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCAGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGCGGTAA  >  NC_000913/1383521‑1383700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`