BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,391,027	A→G	intergenic (+113/‑203)	ycjZ → / → b1329	putative transcriptional regulator LYSR‑type/putative transport periplasmic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,391,027	0	A	G	100.0%	1157.1 / NA	332	intergenic (+113/‑203)	ycjZ/b1329	putative transcriptional regulator LYSR‑type/putative transport periplasmic protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (163/169); total (163/169)

Only 100 of 341 total aligned reads displayed.

TTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACT  >  NC_000913/1390937‑1391115

  aattCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGa                                                                                      >  1:583022/1‑93 (MQ=255)

  aattCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGa                                                                                      >  2:719800/1‑93 (MQ=255)

  aattCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGa                                                                                      >  2:3725648/1‑93 (MQ=255)

   attCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaa                                                                                     >  1:5952416/1‑93 (MQ=255)

   attCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaa                                                                                     >  2:7737579/1‑93 (MQ=255)

    ttcttcTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACGATGGCGACAGATGCTGATTATGATGCCGaaa                                                                                    <  1:4974362/93‑1 (MQ=255)

     tcttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaaaa                                                                                   >  2:727136/1‑93 (MQ=255)

     tcttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaaaa                                                                                   <  2:6620794/93‑1 (MQ=255)

      cttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAAc                                                                                  <  2:4260334/93‑1 (MQ=255)

      cttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAAc                                                                                  <  1:2712619/93‑1 (MQ=255)

       ttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACg                                                                                 <  2:2572313/93‑1 (MQ=255)

       ttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACg                                                                                 >  1:5555522/1‑93 (MQ=255)

        tctcTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACgg                                                                                >  1:1784151/1‑93 (MQ=255)

        tctcTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACgg                                                                                <  1:5141360/93‑1 (MQ=255)

        tctcTTAACGTATTCTCAGTTCCTTTCAACGTGTTGGTCATTTTTTATTCTTCGTACAAGGGCGACAGATGCTGATTATGATGCCGAAAACgg                                                                                <  1:6261820/93‑1 (MQ=255)

          tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt                                                                              <  1:8100392/93‑1 (MQ=255)

          tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt                                                                              >  1:803672/1‑93 (MQ=255)

          tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt                                                                              >  1:4562348/1‑93 (MQ=255)

          tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt                                                                              >  2:8791844/1‑93 (MQ=255)

            ttAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGttt                                                                            >  1:7466214/1‑93 (MQ=255)

            ttAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGttt                                                                            >  1:3860215/1‑93 (MQ=255)

            ttAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGttt                                                                            <  2:3533324/93‑1 (MQ=255)

             tAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTg                                                                           >  1:8636310/1‑93 (MQ=255)

               aCGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGaa                                                                         <  1:6340319/93‑1 (MQ=255)

                 gTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGCTGCTGATTATGATGCCGAAAACGGGTTTGAACg                                                                       >  1:8486879/1‑93 (MQ=255)

                 gTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACg                                                                       >  2:1934978/1‑93 (MQ=255)

                  tATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGt                                                                      >  1:4269346/1‑93 (MQ=255)

                  tATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGt                                                                      <  1:1409221/93‑1 (MQ=255)

                   aTTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTg                                                                     >  1:5306979/1‑93 (MQ=255)

                    ttCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGGTTATGATGCCGAAAAAGGGTTTGAACGTGc                                                                    >  1:3290511/1‑93 (MQ=255)

                    ttCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGc                                                                    <  1:684876/93‑1 (MQ=255)

                    ttCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGc                                                                    >  1:1509578/1‑93 (MQ=255)

                    ttCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGc                                                                    <  1:6723839/93‑1 (MQ=255)

                       tcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa                                                                 <  1:1232631/93‑1 (MQ=255)

                        cAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAg                                                                >  1:7784445/1‑93 (MQ=255)

                         aGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGc                                                               >  1:3701369/1‑93 (MQ=255)

                         aGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGc                                                               <  1:2408583/93‑1 (MQ=255)

                          gTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGcc                                                              <  2:6968048/93‑1 (MQ=255)

                           ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                             <  2:8688888/93‑1 (MQ=255)

                           ttCCTTTCAACGTTTTGGTCATTTTTGATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                             <  1:7628739/93‑1 (MQ=255)

                               tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAc                                                         >  2:2202732/1‑93 (MQ=255)

                               tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAc                                                         <  2:3814039/93‑1 (MQ=255)

                               tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAc                                                         >  2:4852064/1‑93 (MQ=255)

                                ttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACg                                                        >  2:2520091/1‑93 (MQ=255)

                                 tCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGGACGTGCGAAGCCCGAACGt                                                       >  1:7479717/1‑93 (MQ=255)

                                 tCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGt                                                       >  2:1532191/1‑93 (MQ=255)

                                  cAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGGTTGAACGTGCGAAGCCCGAACGtg                                                      >  2:6838520/1‑92 (MQ=255)

                                   aaCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAg                                                     >  2:672593/1‑93 (MQ=255)

                                   aaCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAg                                                     >  1:6571896/1‑93 (MQ=255)

                                    aCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgt                                                    >  2:4462394/1‑93 (MQ=255)

                                    aCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgt                                                    >  2:8119743/1‑93 (MQ=255)

                                       ttttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGtt                                                 <  1:1097380/93‑1 (MQ=255)

                                        tttGATCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGACCGTGCGAAGCCCGAACGTAGTGTTc                                                <  2:2900571/93‑1 (MQ=255)

                                         ttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCg                                               <  1:7596373/93‑1 (MQ=255)

                                             tCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGt                                           <  2:8409960/93‑1 (MQ=255)

                                             tCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGt                                           >  2:7788003/1‑93 (MQ=255)

                                             tCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGt                                           >  2:6140807/1‑93 (MQ=255)

                                               aTTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTc                                         >  1:2610479/1‑93 (MQ=255)

                                               aTTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTc                                         <  2:7888911/93‑1 (MQ=255)

                                               aTTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTc                                         >  2:2678043/1‑93 (MQ=255)

                                                ttttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCt                                        >  2:5954428/1‑93 (MQ=255)

                                                 tttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTa                                       <  1:7173228/93‑1 (MQ=255)

                                                  ttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAt                                      <  2:8530000/93‑1 (MQ=255)

                                                  ttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAt                                      <  2:3598083/93‑1 (MQ=255)

                                                   tttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtg                                     <  2:6112322/93‑1 (MQ=255)

                                                   tttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtg                                     <  1:4832836/93‑1 (MQ=255)

                                                    ttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtgt                                    <  2:565781/93‑1 (MQ=255)

                                                    ttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtgt                                    >  2:5136028/1‑93 (MQ=255)

                                                      aTTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGc                                  >  2:5473815/1‑93 (MQ=255)

                                                            cGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAcc                            >  1:2056988/1‑93 (MQ=255)

                                                            cGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAcc                            >  2:5785912/1‑93 (MQ=255)

                                                             gTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCg                           >  1:6114822/1‑93 (MQ=255)

                                                              tACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGc                          >  1:2284441/1‑93 (MQ=255)

                                                              tACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGc                          >  1:2549536/1‑93 (MQ=255)

                                                               aCAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCACGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCa                         >  1:91493/1‑93 (MQ=255)

                                                                 aaTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAtt                       <  2:2442748/93‑1 (MQ=255)

                                                                  aTGGCGACAGATGCTGATTATGATGCCGGAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAttt                      >  1:31072/1‑93 (MQ=255)

                                                                  aTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAttt                      <  2:2110443/93‑1 (MQ=255)

                                                                  aTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAttt                      <  1:868447/93‑1 (MQ=255)

                                                                    ggCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTg                    >  1:7094145/1‑93 (MQ=255)

                                                                    ggCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTg                    <  1:532755/93‑1 (MQ=255)

                                                                     gCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTgg                   >  1:5635282/1‑93 (MQ=255)

                                                                      cGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGga                  <  2:6518004/93‑1 (MQ=255)

                                                                      cGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGga                  <  2:8173514/93‑1 (MQ=255)

                                                                      cGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGga                  <  2:4802956/93‑1 (MQ=255)

                                                                         cAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGAc               <  1:4150797/93‑1 (MQ=255)

                                                                          aGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACt              >  2:3300042/1‑93 (MQ=255)

                                                                             tGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatt           >  2:7525237/1‑93 (MQ=255)

                                                                             tGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatt           <  1:4409083/93‑1 (MQ=255)

                                                                              tcTGTTTAAGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatta          <  1:7271508/92‑1 (MQ=255)

                                                                              gCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatta          <  2:4540329/93‑1 (MQ=255)

                                                                              gCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatta          <  2:1866071/93‑1 (MQ=255)

                                                                              gCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatta          >  1:3158417/1‑93 (MQ=255)

                                                                               cTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtattat         <  2:1305689/93‑1 (MQ=255)

                                                                                 gATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAttt       >  1:2893241/1‑93 (MQ=255)

                                                                                  aTTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTa      <  2:5878992/93‑1 (MQ=255)

                                                                                  aTTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTa      <  2:1262240/93‑1 (MQ=255)

                                                                                    tATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTaca    <  2:6266896/93‑1 (MQ=255)

                                                                                      tGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACt  >  1:2126957/1‑93 (MQ=255)

                                                                                      tGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACt  <  2:5539956/93‑1 (MQ=255)

TTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACT  >  NC_000913/1390937‑1391115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`