BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,668,733	A→G	S337S (TCA→TCG)	ynfM →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,668,733	0	A	G	100.0%	952.7 / NA	276	S337S (TCA→TCG)	ynfM	putative transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (147/129); total (147/129)

Only 100 of 293 total aligned reads displayed.

GTTGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCT  >  NC_000913/1668643‑1668822

gttgttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTcggc                                                                                         >  2:8038523/1‑93 (MQ=255)

 ttgttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTcggca                                                                                        >  2:3999760/1‑93 (MQ=255)

  tgttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTcggcag                                                                                       >  1:1940287/1‑93 (MQ=255)

   gttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAgg                                                                                      >  1:2225196/1‑93 (MQ=255)

       tCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttc                                                                                  <  2:1139652/93‑1 (MQ=255)

       tCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttc                                                                                  <  1:7907568/93‑1 (MQ=255)

        cGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGGttct                                                                                 >  1:5180572/1‑93 (MQ=255)

        cGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttct                                                                                 <  1:5326503/93‑1 (MQ=255)

        cGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttct                                                                                 <  1:384580/93‑1 (MQ=255)

         gACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttctt                                                                                <  1:735344/93‑1 (MQ=255)

          aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttcttc                                                                               >  1:1036236/1‑93 (MQ=255)

          aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttcttc                                                                               >  2:3359645/1‑93 (MQ=255)

          aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttcttc                                                                               <  1:3361127/93‑1 (MQ=255)

          aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTAATCTTCTCGGCAGGAttcttc                                                                               >  1:2362835/1‑93 (MQ=255)

           cGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCg                                                                              >  1:8457770/1‑93 (MQ=255)

           cGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCg                                                                              >  1:2316512/1‑93 (MQ=255)

            gggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGc                                                                             <  2:2551871/93‑1 (MQ=255)

             ggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCa                                                                            >  2:4228862/1‑93 (MQ=255)

              gggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAg                                                                           >  1:5597949/1‑93 (MQ=255)

               ggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGATTGTTACTCTTCTCGGCAGGATTCTTCGCAGc                                                                          <  1:8328929/93‑1 (MQ=255)

                gTTATGCTGTTTTGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGcc                                                                         <  2:1682532/93‑1 (MQ=255)

                gTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGcc                                                                         <  2:676834/93‑1 (MQ=255)

                 ttATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGccc                                                                        >  1:3468158/1‑93 (MQ=255)

                 ttATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGccc                                                                        <  2:8436173/93‑1 (MQ=255)

                 gtATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGccc                                                                        <  1:4535738/92‑1 (MQ=255)

                  tATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGCCAGGATTCTTCGCAGCCCa                                                                       >  2:1505208/1‑93 (MQ=255)

                   aTGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCAc                                                                      <  2:8502407/93‑1 (MQ=255)

                   aTGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCAc                                                                      >  1:6994305/1‑93 (MQ=255)

                      cTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCa                                                                   <  2:7106520/93‑1 (MQ=255)

                       tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAg                                                                  <  2:3921593/93‑1 (MQ=255)

                       tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGACTCTTCGCAGACCACTCAg                                                                  >  1:7851926/1‑93 (MQ=255)

                       ggTTTGGTTTACTGATGACCTTATTCAGCGCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCTGGATTCTGTGCTGCCCACTCAg                                                                  >  1:7808248/2‑93 (MQ=255)

                        gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt                                                                 >  1:7270585/1‑93 (MQ=255)

                        gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt                                                                 >  1:4122224/1‑93 (MQ=255)

                          tttgTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAg                                                               <  2:1397688/90‑1 (MQ=255)

                           tGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGc                                                              >  2:5621006/1‑93 (MQ=255)

                             gTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCca                                                            >  1:296992/1‑93 (MQ=255)

                             gTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCca                                                            <  2:5359164/93‑1 (MQ=255)

                             gTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCca                                                            >  1:4605483/1‑93 (MQ=255)

                               ttACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCcagc                                                          <  2:8223029/93‑1 (MQ=255)

                               ttACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCcagc                                                          <  1:4990792/93‑1 (MQ=255)

                                tACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTGCTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCcagca                                                         <  2:2191787/93‑1 (MQ=255)

                                 aCTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCcagcaa                                                        <  1:3997782/93‑2 (MQ=255)

                                  cttatgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCagcagc                                                       <  1:2027951/90‑1 (MQ=255)

                                  cTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCagcagc                                                       >  2:2267640/1‑93 (MQ=255)

                                   tgatgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCt                                                      >  1:2457235/1‑93 (MQ=255)

                                   tgatgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCt                                                      >  2:5856674/1‑93 (MQ=255)

                                    gatgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTg                                                     >  2:6341181/1‑93 (MQ=255)

                                     atgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTgg                                                    >  2:8608474/1‑93 (MQ=255)

                                     atgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTgg                                                    >  1:172456/1‑93 (MQ=255)

                                       gaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTCGCCAGCAGCTGGAt                                                  >  1:7476550/1‑93 (MQ=255)

                                       gaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGAt                                                  <  2:501758/93‑1 (MQ=255)

                                       gaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGAt                                                  <  2:1548200/93‑1 (MQ=255)

                                        aCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATc                                                 >  2:7698298/1‑93 (MQ=255)

                                           ttATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGc                                              <  2:5963815/93‑1 (MQ=255)

                                             aTTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGccc                                            >  2:3072838/1‑93 (MQ=255)

                                              ttCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGcccc                                           <  1:4862145/93‑1 (MQ=255)

                                               tCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGccccc                                          >  1:4530598/1‑93 (MQ=255)

                                                 aGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgc                                        <  2:4347555/93‑1 (MQ=255)

                                                   cTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCgcgc                                      >  1:1824445/1‑93 (MQ=255)

                                                    tCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCa                                     >  1:2402247/1‑93 (MQ=255)

                                                    tCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCa                                     >  1:1190328/1‑93 (MQ=255)

                                                      gCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCCCGCaaa                                   >  2:6608611/1‑93 (MQ=255)

                                                        tgtgGCTGATATTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAAc                                 >  1:3103286/1‑93 (MQ=255)

                                                         gtgGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAAcg                                <  2:7032310/93‑1 (MQ=255)

                                                         gtgGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAAcg                                >  1:5003163/1‑93 (MQ=255)

                                                          tgGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAAcgc                               <  2:2746636/93‑1 (MQ=255)

                                                            gCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACgcgc                             <  2:5280106/93‑1 (MQ=255)

                                                              tGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTa                           >  1:81046/1‑93 (MQ=255)

                                                              tGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGACCCCGCGCACAACgcgcca                           >  1:7125897/1‑91 (MQ=255)

                                                              tGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCCGGATCGGCCCCCGCGCAAAACGCGCTa                           >  1:6580395/1‑93 (MQ=255)

                                                               gATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTaa                          >  2:6147951/1‑93 (MQ=255)

                                                               gATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTaa                          >  2:2984495/1‑93 (MQ=255)

                                                               gATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTaa                          >  1:2607974/1‑93 (MQ=255)

                                                                 tCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAag                        <  1:1154182/93‑1 (MQ=255)

                                                                  cTTTGCCGGAATGTTTCTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAagg                       <  1:1311535/93‑1 (MQ=255)

                                                                   tttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggc                      <  2:4562159/93‑1 (MQ=255)

                                                                    ttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcc                     <  1:594614/93‑1 (MQ=255)

                                                                     tGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcca                    <  2:3815483/93‑1 (MQ=255)

                                                                     tGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcca                    <  2:4853515/93‑1 (MQ=255)

                                                                     tGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcca                    <  2:5258271/93‑1 (MQ=255)

                                                                     tGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcca                    <  1:6348558/93‑1 (MQ=255)

                                                                      gCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccag                   <  2:1068828/93‑1 (MQ=255)

                                                                        cGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccaggc                 <  1:7731112/93‑1 (MQ=255)

                                                                         ggAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccaggcc                <  1:356117/93‑1 (MQ=255)

                                                                          gAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGcct               >  2:1899560/1‑93 (MQ=255)

                                                                          gAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGcct               <  1:8738920/93‑1 (MQ=255)

                                                                             tGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCCAGACGAGCTAAAGGCCAGGcctcct            >  2:4755479/1‑93 (MQ=255)

                                                                             tGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGcctcct            >  1:5494226/1‑93 (MQ=255)

                                                                              gTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCctcctc           <  2:3142595/93‑1 (MQ=255)

                                                                              gTTACTCTTCTCGCCCGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGTATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCctcctc           <  2:2867939/93‑1 (MQ=255)

                                                                                tACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc         <  1:7600884/93‑1 (MQ=255)

                                                                                tACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc         >  1:2879650/1‑93 (MQ=255)

                                                                                    cttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTa     >  2:3711045/1‑93 (MQ=255)

                                                                                    cttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTa     <  1:5699857/93‑1 (MQ=255)

                                                                                     ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt    >  1:5793306/1‑93 (MQ=255)

                                                                                     ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt    <  2:8750979/93‑1 (MQ=255)

                                                                                      tctcGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGGGCTAAAGGCCAGGCCTCCTCGCTGTATc   >  1:489707/1‑93 (MQ=255)

                                                                                      tctcGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATc   >  1:468436/1‑93 (MQ=255)

                                                                                      tctcGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATc   >  2:3179287/1‑93 (MQ=255)

GTTGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCT  >  NC_000913/1668643‑1668822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`