Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,672,529 T→C V198A (GTG→GCG)  b1601 → putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,672,5290TC98.8% 863.9 / ‑1.2 258V198A (GTG→GCG) b1601putative transport protein
Reads supporting (aligned to +/- strand):  ref base T (1/2);  new base C (119/136);  total (120/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01

Only 100 of 265 total aligned reads displayed.

TGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAT  >  NC_000913/1672439‑1672618
                                                                                          |                                                                                         
tGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGgcgc                                                                                         >  1:4564414/1‑93 (MQ=255)
 gCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCt                                                                                        >  2:3053770/1‑93 (MQ=255)
   ccGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTTAACGTGCGATTGACAGTGTTTCTCATTATCTTGCGCTGa                                                                                      <  1:3739524/93‑1 (MQ=255)
   ccGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGa                                                                                      <  2:3839938/93‑1 (MQ=255)
    cGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGTGATTGACAGTGTTTCTCATTATCTGGCGCTGaa                                                                                     >  1:8504852/1‑93 (MQ=255)
     ggAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGaaa                                                                                    >  2:7287016/1‑93 (MQ=255)
     ggAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGaaa                                                                                    >  1:145354/1‑93 (MQ=255)
      gAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGaaaa                                                                                   <  2:3267504/93‑1 (MQ=255)
      gAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGaaaa                                                                                   <  1:1030002/93‑1 (MQ=255)
       aaaaTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAAc                                                                                  >  1:2961156/1‑93 (MQ=255)
       aaaaTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAAc                                                                                  >  2:4460508/1‑93 (MQ=255)
        aaaTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACa                                                                                 <  1:8436673/93‑1 (MQ=255)
        aaaTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACa                                                                                 >  2:634769/1‑93 (MQ=255)
          aTTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGc                                                                               <  1:4298941/93‑1 (MQ=255)
           tttCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGcc                                                                              >  2:4056514/1‑93 (MQ=255)
            ttCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCa                                                                             >  2:7828853/1‑93 (MQ=255)
               aGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAGAACAGCCATCa                                                                          <  2:5058597/93‑1 (MQ=255)
               aGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCa                                                                          <  2:6283164/93‑1 (MQ=255)
                gCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAg                                                                         >  1:6747934/1‑93 (MQ=255)
                gCAAATGATGGCGCCTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAg                                                                         <  2:4941634/93‑1 (MQ=255)
                 cAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAATACAGCCATGAga                                                                        >  2:3305699/1‑92 (MQ=255)
                 cAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGc                                                                        <  1:5129305/93‑1 (MQ=255)
                  aaaTGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGca                                                                       <  1:4149353/93‑1 (MQ=255)
                     tgatgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGcatca                                                                    <  2:6571003/93‑1 (MQ=255)
                       atgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCatcatc                                                                  <  1:3856698/93‑1 (MQ=255)
                       atgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCatcatc                                                                  >  1:3818565/1‑93 (MQ=255)
                       atgGCGCGCCCGGTAGAAGGGATGGCGGCGATTCAACGTGCGATTGACTGAGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCatcatc                                                                  >  2:3023633/1‑93 (MQ=255)
                        tgGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCAtcatca                                                                 <  1:8463045/93‑1 (MQ=255)
                        aggCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCAtcatca                                                                 <  2:70694/92‑1 (MQ=255)
                          gcgcGTCCGGTTGAAGGGATGGCGTCTATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCAcc                                                               <  2:4240162/93‑1 (MQ=255)
                          gcgcGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCAcc                                                               <  2:7170383/93‑1 (MQ=255)
                            gcgTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCgg                                                             >  1:4803690/1‑93 (MQ=255)
                             cgTCCGGTTGAAGGGATGGCGGGGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGc                                                            >  1:1532059/1‑93 (MQ=255)
                              gTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGcc                                                           >  2:3780809/1‑93 (MQ=255)
                               tCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCt                                                          >  1:2176978/1‑93 (MQ=255)
                                   gTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAGCAGCCATCAGCATCATCACCGGCCTGGTc                                                      <  2:1343520/93‑1 (MQ=255)
                                   gTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTc                                                      >  2:1155338/1‑93 (MQ=255)
                                    ttGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCg                                                     <  2:2204517/93‑1 (MQ=255)
                                     tGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGc                                                    <  2:2672558/93‑1 (MQ=255)
                                      gAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGcc                                                   <  2:7034153/93‑1 (MQ=255)
                                      gAAGGGATGGCGGCGAGTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGcc                                                   <  1:753189/93‑1 (MQ=255)
                                        aGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTg                                                 <  1:5941648/93‑1 (MQ=255)
                                         gggATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTgg                                                <  2:1851286/93‑1 (MQ=255)
                                              ggcggcGATTCAACGTGCGATTGACAGTGTTTGTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGAt                                           >  1:5621292/1‑93 (MQ=255)
                                               gcggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATg                                          <  2:4112655/93‑1 (MQ=255)
                                                cggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGc                                         >  1:7171876/1‑93 (MQ=255)
                                                   cgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcg                                      >  1:8020040/1‑93 (MQ=255)
                                                    gATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcgc                                     >  1:4723195/1‑93 (MQ=255)
                                                     aTTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcgcc                                    >  2:2008138/1‑93 (MQ=255)
                                                     aTTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcgcc                                    >  2:5915741/1‑93 (MQ=255)
                                                     aTTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcgcc                                    >  1:2847584/1‑93 (MQ=255)
                                                     aTTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTcgcc                                    >  1:5022925/1‑93 (MQ=255)
                                                         aaCGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCAc                                >  1:5728037/1‑93 (MQ=255)
                                                          aCGTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACt                               >  2:3599577/1‑93 (MQ=255)
                                                            gTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCg                             >  2:1496420/1‑93 (MQ=255)
                                                            gTGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATAATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCg                             >  2:7984141/1‑93 (MQ=255)
                                                             tGCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGa                            <  1:6913107/93‑1 (MQ=255)
                                                              gCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGAt                           <  2:873783/93‑1 (MQ=255)
                                                              gCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGAt                           <  2:5132759/93‑1 (MQ=255)
                                                              gCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGAt                           <  1:8794835/93‑1 (MQ=255)
                                                              gCGATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGAt                           <  1:7698030/93‑1 (MQ=255)
                                                               cGATTGACAGTGTTTCTCATTATCTGGCGCGGACAACAGCCATCAGCAGCATCACCGGCCTGGTCGTCTGGTCGATGCTCGCCGCACTCGATg                          <  1:931737/93‑1 (MQ=255)
                                                                gATTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGt                         <  1:4460508/93‑1 (MQ=255)
                                                                 aTTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGtt                        >  2:1754226/1‑93 (MQ=255)
                                                                 aTTGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGtt                        >  2:4920367/1‑93 (MQ=255)
                                                                  ttGACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc                       >  2:668071/1‑93 (MQ=255)
                                                                    gACAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgc                     <  1:1002123/93‑1 (MQ=255)
                                                                     aCAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgct                    <  2:6872441/93‑1 (MQ=255)
                                                                     aCAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgct                    >  1:230261/1‑93 (MQ=255)
                                                                     aCAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgct                    >  2:811381/1‑93 (MQ=255)
                                                                      cAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgctt                   <  1:6454487/93‑1 (MQ=255)
                                                                      cAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgctt                   >  1:96910/1‑93 (MQ=255)
                                                                      cAGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgctt                   >  2:4794068/1‑93 (MQ=255)
                                                                       aGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttc                  >  1:3359065/1‑93 (MQ=255)
                                                                       aGTGTTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttc                  <  1:4705904/93‑1 (MQ=255)
                                                                        gtgtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttcg                 >  1:7211263/1‑93 (MQ=255)
                                                                        gtgtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttcg                 >  1:5523350/1‑93 (MQ=255)
                                                                        gtgtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttcg                 >  2:244869/1‑93 (MQ=255)
                                                                         tgtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttcgc                <  1:3166561/93‑1 (MQ=255)
                                                                          gtTTCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTtcgcttcgct               >  2:2424910/1‑93 (MQ=255)
                                                                           tttCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTcgcttcgctt              >  2:827686/1‑93 (MQ=255)
                                                                           tttCTCATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTcgcttcgctt              >  2:3702964/1‑93 (MQ=255)
                                                                             tctcATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCtttt            <  1:638416/93‑1 (MQ=255)
                                                                              ctcATTATCTGGCGCTGAAAACATCCATCAGCATCATCGCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTg           <  2:4136069/93‑1 (MQ=255)
                                                                              ctcATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTg           <  1:7992346/93‑1 (MQ=255)
                                                                              ctcATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTg           <  1:2832497/93‑1 (MQ=255)
                                                                              ctcATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTg           <  2:3968493/93‑1 (MQ=255)
                                                                               tcATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGt          >  2:6180680/1‑93 (MQ=255)
                                                                               tcATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGt          >  1:7331469/1‑93 (MQ=255)
                                                                                cATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTc         >  2:5445575/1‑93 (MQ=255)
                                                                                cATTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTc         >  1:1766406/1‑93 (MQ=255)
                                                                                 aTTATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCt        >  1:1681352/1‑93 (MQ=255)
                                                                                  ttATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg       <  1:20564/93‑1 (MQ=255)
                                                                                  ttATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg       <  2:769790/93‑1 (MQ=255)
                                                                                   tATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgg      <  1:2604006/93‑1 (MQ=255)
                                                                                   tATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgg      <  1:1244662/93‑1 (MQ=255)
                                                                                   tATCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgg      >  1:4943929/1‑93 (MQ=255)
                                                                                    aTCTGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTggg     >  1:7567091/1‑93 (MQ=255)
                                                                                       tGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAt  <  1:6606826/93‑1 (MQ=255)
                                                                                       tGGCGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAt  <  1:463923/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAT  >  NC_000913/1672439‑1672618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: