| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,681,154 | T→C | S83S (AGT→AGC) | rstB → | sensor histidine protein kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,681,154 | 0 | T | C | 99.7% | 1079.3 / NA | 310 | S83S (AGT→AGC) | rstB | sensor histidine protein kinase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (164/145); total (165/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 318 total aligned reads displayed.
ATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAT > NC_000913/1681064‑1681243 | aTTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCaa < 2:4304485/93‑1 (MQ=255) ttGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAATTCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCaaa < 2:180028/93‑1 (MQ=255) tGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCa < 2:751604/93‑1 (MQ=255) tGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCa < 2:630711/93‑1 (MQ=255) tGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCa > 2:4838836/1‑93 (MQ=255) aTCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCtt < 2:6971852/93‑1 (MQ=255) cccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgat < 1:7034180/93‑1 (MQ=255) ccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgatg < 2:8423157/93‑1 (MQ=255) cacaCGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGata > 2:4097785/1‑93 (MQ=255) aacGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATAtt < 2:2456685/92‑1 (MQ=255) gACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTcc < 2:2747233/93‑1 (MQ=255) gACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTcc < 2:3023535/93‑1 (MQ=255) aCTGTGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCa < 2:3759842/93‑1 (MQ=255) aCTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCa < 2:2113509/93‑1 (MQ=255) aCTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCa < 2:5159316/93‑1 (MQ=255) cTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCAt < 2:2257271/93‑1 (MQ=255) tGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATg < 2:1643656/93‑1 (MQ=255) tGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATg > 2:1307389/1‑93 (MQ=255) gaaaaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAcc < 2:3139235/91‑1 (MQ=255) gTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAcc < 2:7241859/93‑1 (MQ=255) tAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCg > 1:84163/1‑93 (MQ=255) aaaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGa > 1:336242/1‑93 (MQ=255) aaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGAc < 1:3803180/93‑1 (MQ=255) aaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGAc < 1:6489344/93‑1 (MQ=255) aaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGAc < 1:4979567/93‑1 (MQ=255) aaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt < 1:3629925/93‑1 (MQ=255) aaCTCTGAAAGAGAGGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt < 2:8692793/93‑1 (MQ=255) tctGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCg > 2:202749/1‑93 (MQ=255) tGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTg < 1:8189372/93‑1 (MQ=255) gAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACTATCTTGATGATATTTCCATGCACCGACTGCGTgg < 2:5498669/93‑1 (MQ=255) gAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTgg > 2:4028133/1‑93 (MQ=255) gAAAGAGATGGATTGAAATCTCTCTTTCGATCCGCGTGGCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTgg < 1:2375575/93‑1 (MQ=255) aaaGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggg > 1:1888745/1‑92 (MQ=255) aaaGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggc < 1:3218239/93‑1 (MQ=255) aaaGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggc > 2:7184120/1‑93 (MQ=255) aaaGAGATGCATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTAATAAAATACCATCTTGCTGATATTTCCATGCTCCGACTGCGTggc > 2:5815999/1‑93 (MQ=255) aaGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcg > 2:150510/1‑93 (MQ=255) aaGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcg < 1:1216082/93‑1 (MQ=255) agagATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcgg > 2:4165554/1‑93 (MQ=255) agagATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcgg > 1:746117/1‑93 (MQ=255) agagATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcgg > 1:2761687/1‑93 (MQ=255) gagaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcggc > 1:4924584/1‑93 (MQ=255) agaTTGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGgcggcg > 2:5604439/1‑93 (MQ=255) agaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGgcggcg > 1:6396613/1‑93 (MQ=255) agaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGgcggcg < 1:8534530/93‑1 (MQ=255) aTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGaa > 1:4796789/1‑93 (MQ=255) aTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGaa > 1:7717691/1‑93 (MQ=255) ggATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAAt > 1:106888/1‑93 (MQ=255) ggATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAAt < 2:6079154/93‑1 (MQ=255) tttAAATCGCTCTTTCTATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGt < 1:3008261/93‑1 (MQ=255) ttAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTc < 2:3447167/93‑1 (MQ=255) tAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCg < 1:6652858/93‑1 (MQ=255) tAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCg > 2:8040367/1‑93 (MQ=255) aaaTCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGc > 2:5624607/1‑93 (MQ=255) aaaTCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGc > 1:2620426/1‑93 (MQ=255) aaTCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGcc > 2:4781767/1‑93 (MQ=255) aTCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGccc > 1:406841/1‑93 (MQ=255) tctctcTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCt > 2:3474336/1‑93 (MQ=255) ctctttTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTg < 2:1955837/93‑1 (MQ=255) tctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTgg > 1:4105701/1‑93 (MQ=255) ctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGa < 2:1234697/93‑1 (MQ=255) tctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGAc < 1:2258816/93‑1 (MQ=255) tctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGAc > 1:1362646/1‑93 (MQ=255) tctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGAc > 1:522957/1‑93 (MQ=255) tctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGAc > 1:6932942/1‑93 (MQ=255) tttCGATCTGCGTGTGGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGa < 2:6788771/93‑1 (MQ=255) ttCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGTTGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCTCTCTGGACGAt > 2:7838719/1‑93 (MQ=255) cGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCa < 1:4158921/93‑1 (MQ=255) cGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCa > 2:3906080/1‑93 (MQ=255) gATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAg > 2:8540561/1‑93 (MQ=255) aTCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAga > 1:4377979/1‑92 (MQ=255) aTCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGt > 1:5517044/1‑93 (MQ=255) aTCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGt > 1:976941/1‑93 (MQ=255) tCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTa < 1:1549655/93‑1 (MQ=255) tCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTa > 2:8228990/1‑93 (MQ=255) tCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTa > 1:5431739/1‑93 (MQ=255) cTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTac < 1:5643084/93‑1 (MQ=255) cTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTac < 1:5781812/93‑1 (MQ=255) cTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTac < 2:5710468/93‑1 (MQ=255) cTGCGTGTCGAGCCACTAAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTac < 2:4521185/93‑1 (MQ=255) tGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTaca > 1:3072452/1‑93 (MQ=255) gCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTacac < 1:3450083/93‑1 (MQ=255) gtgtCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGt > 2:176696/1‑93 (MQ=255) tgtCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGtt > 1:6539381/1‑93 (MQ=255) gtCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGttt > 2:4504464/1‑93 (MQ=255) tCGAGCCACTGAGCAAATACCATCTTGATTATATTTCCATGCTCCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGtttt < 1:2105357/93‑1 (MQ=255) tCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGtttt > 1:5121477/1‑93 (MQ=255) gAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTg > 2:332728/1‑93 (MQ=255) gAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTg < 1:3302177/93‑1 (MQ=255) gCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCa < 1:2433977/93‑1 (MQ=255) gCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCa > 1:6629195/1‑93 (MQ=255) gCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCa < 2:3543373/93‑1 (MQ=255) cACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGc > 1:3859107/1‑93 (MQ=255) cACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGc < 2:5943335/93‑1 (MQ=255) aCTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCg < 1:6124345/93‑1 (MQ=255) aCTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCg > 1:8643206/1‑93 (MQ=255) cTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGt < 2:6412231/93‑1 (MQ=255) tGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTa > 1:7224351/1‑93 (MQ=255) gAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAt > 2:7040504/1‑93 (MQ=255) gAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAt < 2:5281402/93‑1 (MQ=255) | ATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAT > NC_000913/1681064‑1681243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |