BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,799,252	T→C	N448S (AAC→AGC)	thrS ←	threonine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,799,252	0	T	C	100.0%	875.6 / NA	251	N448S (AAC→AGC)	thrS	threonine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (140/111); total (140/111)

Only 100 of 281 total aligned reads displayed.

CATGCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTG  >  NC_000913/1799162‑1799341

cATGCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGctt                                                                                         <  2:4706311/93‑1 (MQ=255)

cATGCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGctt                                                                                         >  2:4468475/1‑93 (MQ=255)

 aTGCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGcttt                                                                                        >  1:288130/1‑93 (MQ=255)

  tGCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTttc                                                                                       <  1:7494563/93‑1 (MQ=255)

  tGCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTttc                                                                                       >  2:7721823/1‑93 (MQ=255)

  tGCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTttc                                                                                       <  1:1947369/93‑1 (MQ=255)

  tGCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTttc                                                                                       >  2:2984178/1‑93 (MQ=255)

   gCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTttct                                                                                      >  1:7234241/1‑93 (MQ=255)

   gCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTttct                                                                                      <  1:8721349/93‑1 (MQ=255)

   gCACGATCGAGGCAGTCATACAGAGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTttct                                                                                      <  2:3193870/93‑1 (MQ=255)

     aCGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTttcttc                                                                                    >  1:1019756/1‑93 (MQ=255)

     aCGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTttcttc                                                                                    <  2:104669/93‑1 (MQ=255)

       gATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCa                                                                                  >  2:1964192/1‑93 (MQ=255)

        aTCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAg                                                                                 >  2:4936351/1‑93 (MQ=255)

         tCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAgc                                                                                <  2:8395894/93‑1 (MQ=255)

           gAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAgcgc                                                                              >  2:8694929/1‑93 (MQ=255)

           gAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAgcgc                                                                              >  1:4403452/1‑93 (MQ=255)

             ggCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCaa                                                                            >  2:3980770/1‑93 (MQ=255)

             ggCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCaa                                                                            <  1:2477899/93‑1 (MQ=255)

              gCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAAc                                                                           <  2:4582982/93‑1 (MQ=255)

              gCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAAc                                                                           <  1:8591237/93‑1 (MQ=255)

               cAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAAcc                                                                          <  2:6992110/93‑1 (MQ=255)

                 gTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGc                                                                        >  2:5862631/1‑93 (MQ=255)

                  tCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGcc                                                                       >  2:5468751/1‑93 (MQ=255)

                   cATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCa                                                                      <  1:3384168/93‑1 (MQ=255)

                    aTACAGGGAAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGAGATGTTGCTTTCTTCCAGCGCAACCGCCAg                                                                     >  2:2406319/1‑93 (MQ=255)

                     tACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAgg                                                                    >  2:6445910/1‑93 (MQ=255)

                      aCAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGt                                                                   <  2:6695619/93‑1 (MQ=255)

                      aCAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGt                                                                   <  2:6259055/93‑1 (MQ=255)

                       catggTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAGCGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTc                                                                  <  2:7932517/90‑1 (MQ=255)

                       cAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTc                                                                  <  1:1069699/93‑1 (MQ=255)

                        aGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTcc                                                                 >  1:5993423/1‑93 (MQ=255)

                        aGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTcc                                                                 >  1:8527314/1‑93 (MQ=255)

                        aGGGTAAAGTCAATTGTCGGACCGGAGCAAGCGCCTTCCCCCAGTGGATATTCAAACGGGAGGTTCCTTTCTTCCAGCGCAACCGCCAGGTcc                                                                 <  1:3867748/93‑1 (MQ=255)

                         gggTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCg                                                                <  1:1156266/93‑1 (MQ=255)

                           gTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGcc                                                              <  1:8629575/93‑1 (MQ=255)

                            tAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCt                                                             >  2:4925447/1‑93 (MQ=255)

                             aaaTTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTc                                                            <  1:4589391/93‑1 (MQ=255)

                              aaTTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCa                                                           >  1:8035301/1‑93 (MQ=255)

                              aaTTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCa                                                           <  1:8311949/93‑1 (MQ=255)

                               aTTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCac                                                          >  1:7634738/1‑92 (MQ=255)

                                ttCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGc                                                         <  2:2193760/93‑1 (MQ=255)

                                ttCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGc                                                         >  2:8214474/1‑93 (MQ=255)

                                ttCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACAGCCAGATCCGCGTCCGc                                                         >  1:5276271/1‑93 (MQ=255)

                                 tCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCa                                                        >  2:1644213/1‑93 (MQ=255)

                                  cAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCAc                                                       <  2:3293250/93‑1 (MQ=255)

                                   aaTTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACg                                                      >  2:5324189/1‑93 (MQ=255)

                                   aaTTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACg                                                      >  2:3695825/1‑93 (MQ=255)

                                        tCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATccc                                                 >  1:5782217/1‑93 (MQ=255)

                                         cGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACGGCCAGGCCCCCCTCAGCACGATCCca                                                >  1:486457/1‑93 (MQ=255)

                                         cGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATcccc                                                >  1:7994685/1‑92 (MQ=255)

                                         cGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCca                                                >  2:1866421/1‑93 (MQ=255)

                                         cGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCca                                                >  1:1326891/1‑93 (MQ=255)

                                           gACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGGCTCAGCACGATCCcaca                                              >  1:4182172/1‑93 (MQ=255)

                                           gACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCcaca                                              >  2:5525606/1‑93 (MQ=255)

                                            aCCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACAt                                             >  1:4326850/1‑93 (MQ=255)

                                               gTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTtc                                          <  2:1200107/93‑1 (MQ=255)

                                                tAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTtcg                                         <  2:6840605/93‑1 (MQ=255)

                                                tAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTtcg                                         >  1:6984612/1‑93 (MQ=255)

                                                    aaGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGc                                     >  1:7374387/1‑93 (MQ=255)

                                                     aGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCt                                    >  2:6659200/1‑93 (MQ=255)

                                                         ccTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCa                                >  2:7319022/1‑93 (MQ=255)

                                                         ccTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCa                                >  2:5717316/1‑93 (MQ=255)

                                                          cTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCaa                               <  1:4495467/93‑1 (MQ=255)

                                                          cTTCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCaa                               <  1:507611/93‑1 (MQ=255)

                                                           ttCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAAt                              >  2:8360863/1‑93 (MQ=255)

                                                            tCACCCAGTTGATATTCAAACGGGATGTTGCTTTCTTACAGCCCAACCGCCAGGTCCGCCTCAGCACGAATCCACATTTCGTCGCTGCCAATa                             >  2:2881047/1‑93 (MQ=255)

                                                              aCCCAGTTGATATTCAAACTGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACg                           >  1:1617006/1‑93 (MQ=255)

                                                              aCCCAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACg                           >  2:5333000/1‑93 (MQ=255)

                                                               cccAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGt                          <  2:7025050/93‑1 (MQ=255)

                                                                ccAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGtt                         >  1:6092605/1‑93 (MQ=255)

                                                                ccAGTTGATATTCAAACGGGATGTTGCTTTCTTACAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGtt                         <  1:8494142/93‑1 (MQ=255)

                                                                 cAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGttt                        >  1:3524671/1‑93 (MQ=255)

                                                                 cAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGttt                        >  2:4247412/1‑93 (MQ=255)

                                                                 cAGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGAACGATCCCACATTTCGTCGCTGCCAATACGttt                        >  2:3833667/1‑93 (MQ=255)

                                                                  aGTTGATATTCATACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGtttt                       <  1:1721811/93‑1 (MQ=255)

                                                                  aGTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGtttt                       >  2:4148172/1‑93 (MQ=255)

                                                                   gTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGttttt                      >  2:6948084/1‑93 (MQ=255)

                                                                   gTTGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGttttt                      >  1:4993677/1‑93 (MQ=255)

                                                                    ttGATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTc                     >  1:4113143/1‑93 (MQ=255)

                                                                    gtGATATTCAAGCGGTATGTTGCTTTCTGCTAGAGCAGCCGCCAGGTCCTCCCCAGCACGACCCCACATTACGTCGCTGCCAATACGTTTTTc                     <  2:5239089/92‑1 (MQ=255)

                                                                      gATATTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAg                   >  2:6086817/1‑93 (MQ=255)

                                                                       atatTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAgg                  <  1:2150476/93‑1 (MQ=255)

                                                                        tatTCAAGCGGGATGTTGCTTTCTTCCAGCGCATCCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGa                 <  2:7985136/93‑1 (MQ=255)

                                                                        tatTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGa                 <  1:6393227/93‑1 (MQ=255)

                                                                        tatTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGa                 <  2:5160299/93‑1 (MQ=255)

                                                                         atTCAAACGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGAc                <  1:661665/93‑1 (MQ=255)

                                                                             aaaCGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAgg            >  1:3029551/1‑92 (MQ=255)

                                                                             aaaCGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGt            <  2:1412815/93‑1 (MQ=255)

                                                                             aaaCGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGt            >  1:5150990/1‑93 (MQ=255)

                                                                              aaCGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTg           <  1:652125/93‑1 (MQ=255)

                                                                              aaCGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTg           >  1:1423067/1‑93 (MQ=255)

                                                                                cGGGATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGga         <  1:3588031/93‑1 (MQ=255)

                                                                                 gggATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGgag        >  2:2816458/1‑93 (MQ=255)

                                                                                  ggATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGgaga       >  1:4693081/1‑93 (MQ=255)

                                                                                  ggATGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGgaga       <  1:2267694/93‑1 (MQ=255)

                                                                                    aTGTTGCTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGt     <  1:5686213/93‑1 (MQ=255)

                                                                                     tgttgcTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGtt    <  1:2040044/93‑1 (MQ=255)

                                                                                     tgttgcTTTCTTCCAGCGCAACCGCCAGGGCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGtt    >  1:2902951/1‑93 (MQ=255)

                                                                                       ttgctTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTg  >  2:3528789/1‑93 (MQ=255)

CATGCACGATCGAGGCAGTCATACAGGGTAAATTCAATTTTCGGACCGTAGAAAGCGCCTTCACCCAGTTGATATTCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTG  >  NC_000913/1799162‑1799341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`