BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,417,173	A→G	S8S (AGT→AGC)	b2299 ←	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,417,173	0	A	G	99.7%	1171.9 / NA	336	S8S (AGT→AGC)	b2299	putative regulator
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (169/166); minor base C (0/1); total (169/167)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 342 total aligned reads displayed.

ACGATGACGCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTACTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTAAATTACGGAT  >  NC_000913/2417083‑2417261

aCGATGACGCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCt                                                                                        >  2:4614279/1‑93 (MQ=255)

 ctaTGACGCAGACACTGTTCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCtt                                                                                       <  1:3013883/91‑1 (MQ=255)

 cGATGACGCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCtt                                                                                       <  2:7019593/93‑1 (MQ=255)

  gATGACGCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTg                                                                                      <  1:4375357/93‑1 (MQ=255)

    tGACGCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGcc                                                                                    >  1:7695453/1‑93 (MQ=255)

    tGACGCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGcc                                                                                    >  1:6569371/1‑93 (MQ=255)

     gACGCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCa                                                                                   >  1:6852589/1‑93 (MQ=255)

      aCGCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCCATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCaa                                                                                  >  2:6119600/1‑93 (MQ=255)

        gCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAac                                                                                <  1:1728032/93‑1 (MQ=255)

         cAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCaaaag                                                                               >  2:211143/1‑91 (MQ=255)

          aGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGGCTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAacga                                                                              <  1:6701127/93‑1 (MQ=255)

          aGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAacga                                                                              >  2:2275249/1‑93 (MQ=255)

          aGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAacga                                                                              >  1:3882488/1‑93 (MQ=255)

           gACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAacgac                                                                             >  1:5216426/1‑93 (MQ=255)

            acacTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAacgacg                                                                            <  1:3267875/93‑1 (MQ=255)

            acacTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAacgacg                                                                            >  2:3894121/1‑93 (MQ=255)

            acacTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAacgacg                                                                            >  1:220354/1‑93 (MQ=255)

             cacTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGc                                                                           <  2:524734/93‑1 (MQ=255)

             cacTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGc                                                                           <  2:673152/93‑1 (MQ=255)

             cacTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGc                                                                           <  1:5448697/93‑1 (MQ=255)

             cacTGTGCCCGCATGTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGc                                                                           <  2:1516132/93‑1 (MQ=255)

              acTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCt                                                                          <  1:7555962/93‑1 (MQ=255)

                tgtgCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGt                                                                        >  2:4884495/1‑93 (MQ=255)

                tgtgCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGt                                                                        <  2:2657062/93‑1 (MQ=255)

                 gtgtCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGtt                                                                       >  2:7790846/1‑93 (MQ=255)

                 gtgCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGtt                                                                       <  2:8709437/93‑1 (MQ=255)

                   gCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTcc                                                                     <  2:427951/93‑1 (MQ=255)

                   gCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTcc                                                                     >  2:8186967/1‑93 (MQ=255)

                      cacATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCAtt                                                                  >  2:7741727/3‑93 (MQ=255)

                      cGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCAtt                                                                  <  1:4511586/93‑1 (MQ=255)

                      cGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCAtt                                                                  <  1:5772066/93‑1 (MQ=255)

                       gCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTa                                                                 <  2:114951/93‑1 (MQ=255)

                       gCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTa                                                                 >  1:1181740/1‑93 (MQ=255)

                       gCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTa                                                                 >  1:6351611/1‑93 (MQ=255)

                        cATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTAt                                                                <  1:3339969/93‑1 (MQ=255)

                        cATTTGTTCCCGGCTGGCTTCTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTAt                                                                <  2:4097084/93‑1 (MQ=255)

                         aTTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATc                                                               <  1:1009445/93‑1 (MQ=255)

                         aTTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTCCCAAACGACGCTGTTCCATTATc                                                               >  1:4637135/1‑93 (MQ=255)

                          tttGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCa                                                              >  1:940738/1‑93 (MQ=255)

                          tttGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCa                                                              <  1:8165090/93‑1 (MQ=255)

                           ttGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAg                                                             <  2:561962/93‑1 (MQ=255)

                            tGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAgg                                                            >  1:1991661/1‑93 (MQ=255)

                            tGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAgg                                                            >  2:5719293/1‑93 (MQ=255)

                              ttCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGaa                                                          >  1:4031886/1‑93 (MQ=255)

                               tCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGaaa                                                         <  2:6404422/93‑1 (MQ=255)

                               tCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGaaa                                                         >  1:4834656/1‑93 (MQ=255)

                                    gctggctTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACcttt                                                    >  1:7321217/1‑92 (MQ=255)

                                    gctggctTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACcttc                                                    <  1:4925420/93‑1 (MQ=255)

                                     ctggctTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACcttct                                                   <  1:6219352/93‑1 (MQ=255)

                                     ctggctTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACcttct                                                   <  2:3509560/93‑1 (MQ=255)

                                      tggctTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACcttctt                                                  >  2:7420200/1‑93 (MQ=255)

                                      tggctTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACcttctt                                                  <  1:2819553/93‑1 (MQ=255)

                                       ggctTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCttt                                                 >  2:6040968/1‑93 (MQ=255)

                                       ggctTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCttt                                                 >  1:6506735/1‑93 (MQ=255)

                                        gctTGTGCAATGACTTCGTTCGCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCtttt                                                <  2:5578013/93‑1 (MQ=255)

                                            gtgCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTg                                            >  1:1425150/1‑93 (MQ=255)

                                             tgCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTgg                                           >  1:3246506/1‑93 (MQ=255)

                                                aaTGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGgcgc                                        >  2:4415364/1‑93 (MQ=255)

                                                 aTGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGct                                       >  2:5330934/1‑93 (MQ=255)

                                                  tGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGctc                                      >  2:6829766/1‑93 (MQ=255)

                                                  tGACTTCGTTCTCTTCATTGACAATATCAACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGctc                                      <  1:2025872/93‑1 (MQ=255)

                                                    aCTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCtt                                    <  2:1686475/93‑1 (MQ=255)

                                                    aCTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCtt                                    <  2:3420346/93‑1 (MQ=255)

                                                      ttCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTAc                                  >  2:3763082/1‑93 (MQ=255)

                                                      ttCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTAc                                  >  1:3367377/1‑93 (MQ=255)

                                                      ttCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTAc                                  <  2:2384258/93‑1 (MQ=255)

                                                       tCGTTCTCTTCATTGACAATATCCCCCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACg                                 <  1:2368140/93‑1 (MQ=255)

                                                       tCGTTCTCTTCATTGACAATATCCCCCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACg                                 <  2:5810066/93‑1 (MQ=255)

                                                       tCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACg                                 >  1:8533619/1‑93 (MQ=255)

                                                       tCGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACg                                 <  1:5088013/93‑1 (MQ=255)

                                                        cGTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACgg                                >  2:8091472/1‑93 (MQ=255)

                                                         gTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGgc                               <  1:346111/93‑1 (MQ=255)

                                                         gTTCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGgc                               >  2:6963945/1‑93 (MQ=255)

                                                          ttCTCTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGgcg                              <  1:459495/93‑1 (MQ=255)

                                                           tctcTTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGgcgc                             <  2:2483342/93‑1 (MQ=255)

                                                            ctctTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCa                            <  2:10253/93‑1 (MQ=255)

                                                              ctTCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCAtt                          <  1:5642047/93‑1 (MQ=255)

                                                               ttCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCAttt                         <  1:1659258/93‑1 (MQ=255)

                                                                tCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCAtttt                        <  2:5095712/93‑1 (MQ=255)

                                                                tCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCAtttt                        >  2:1785779/1‑93 (MQ=255)

                                                                tCATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCAtttt                        >  1:5931667/1‑93 (MQ=255)

                                                                tCAGTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCAtttt                        <  2:7557721/93‑1 (MQ=255)

                                                                 cATTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTg                       >  1:698558/1‑93 (MQ=255)

                                                                  aTTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGa                      <  2:4313515/93‑1 (MQ=255)

                                                                  aTTGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGa                      <  1:2451379/93‑1 (MQ=255)

                                                                    tGACAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGt                    <  2:5923239/93‑1 (MQ=255)

                                                                       cAATATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTtgt                 <  2:2825257/93‑1 (MQ=255)

                                                                        aaTATCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTtgtg                <  1:3542507/93‑1 (MQ=255)

                                                                         atatCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTgg               >  1:8720065/1‑93 (MQ=255)

                                                                         atatCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTgg               <  2:1629158/93‑1 (MQ=255)

                                                                          tatCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTggg              >  1:2684198/1‑93 (MQ=255)

                                                                           atCCACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGt             >  2:3308459/1‑93 (MQ=255)

                                                                             ccACCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTaa           >  2:4704596/1‑93 (MQ=255)

                                                                               aCCCATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTAAAt         <  2:5410725/93‑1 (MQ=255)

                                                                                 ccATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTAAATTa       <  1:707260/93‑1 (MQ=255)

                                                                                  cATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTAAATTAc      >  1:5340306/1‑93 (MQ=255)

                                                                                  cATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTAAATTAc      >  1:3757117/1‑93 (MQ=255)

                                                                                  cATTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTAAATTAc      >  1:6026545/1‑93 (MQ=255)

                                                                                   aTTCAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTAAATTACg     >  1:61525/1‑93 (MQ=255)

                                                                                      cAGTGCTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTAAATTACGGAt  <  2:5898799/93‑1 (MQ=255)

ACGATGACGCAGACACTGTGCCCGCATTTGTTCCCGGCTGGCTTGTGCAATGACTTCGTTCTCTTCATTGACAATATCCACCCATTCAGTACTTGCCAAACGACGCTGTTCCATTATCAGGAAACCTTCTTTTTCTGGCGCTCTTACGGCGCATTTTGAGTTGTGGGTAAATTACGGAT  >  NC_000913/2417083‑2417261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`