BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,441,613	T→C	F610F (TTT→TTC)	b2324 →	putative peptidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,441,613	0	T	C	98.7%	1075.8 / 0.8	315	F610F (TTT→TTC)	b2324	putative peptidase
Reads supporting (aligned to +/- strand): ref base T (2/2); new base C (150/161); total (152/163)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01

Only 100 of 325 total aligned reads displayed.

CCCGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTTATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTCCGAT  >  NC_000913/2441524‑2441705

cccGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATg                                                                                           >  2:1882521/1‑93 (MQ=255)

cccGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATg                                                                                           <  1:6484877/93‑1 (MQ=255)

 ccGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGt                                                                                          <  1:4297624/93‑1 (MQ=255)

   gATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCCTCATGttt                                                                                        >  1:213514/1‑93 (MQ=255)

   gATTATGAGGCAACACTCGTGGAATATGCGTCGTCGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGttt                                                                                        >  2:6746957/1‑93 (MQ=255)

     ttATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGc                                                                                      <  1:1107407/93‑1 (MQ=255)

     ttATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGc                                                                                      <  2:281001/93‑1 (MQ=255)

       aTGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCgg                                                                                    >  2:6066305/1‑93 (MQ=255)

        tGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGc                                                                                   <  2:4294451/93‑1 (MQ=255)

         gAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCt                                                                                  <  1:6839122/93‑1 (MQ=255)

          aGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCtt                                                                                 <  2:6832061/93‑1 (MQ=255)

           ggCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCttt                                                                                <  2:698718/93‑1 (MQ=255)

           ggCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCttt                                                                                <  1:2550283/93‑1 (MQ=255)

           ggCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCttt                                                                                <  2:7972919/93‑1 (MQ=255)

            gCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTa                                                                               <  2:2992043/93‑1 (MQ=255)

            gCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTa                                                                               <  2:8365346/93‑1 (MQ=255)

            gCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTa                                                                               >  1:117998/1‑93 (MQ=255)

            gCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTa                                                                               <  2:2371208/93‑1 (MQ=255)

             cAACACGCGTGGAATATGCGTCGTTGGCGGAGCAGAAACATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAg                                                                              <  1:2210344/93‑1 (MQ=255)

              aaCACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAgg                                                                             >  2:1820519/1‑93 (MQ=255)

               acacTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGt                                                                            <  2:8174032/93‑1 (MQ=255)

               acacTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGt                                                                            <  1:6374881/93‑1 (MQ=255)

                cacTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGtt                                                                           >  1:3079540/1‑93 (MQ=255)

                 acTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtc                                                                          >  2:5856383/1‑93 (MQ=255)

                 acTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtc                                                                          <  1:4390218/93‑1 (MQ=255)

                  cTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtct                                                                         >  1:8068058/1‑93 (MQ=255)

                  cTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtct                                                                         <  2:5774348/93‑1 (MQ=255)

                    cGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTcg                                                                       <  1:89150/93‑1 (MQ=255)

                     gTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTcgc                                                                      <  2:7402230/93‑1 (MQ=255)

                       gtaaTATGCGTCGTTGGCGGAGCAGAAAGATGTGGCGGTAAGCGCGCTGGTTTTTGTCGTTCTCTTCAAGTTTGCGGTTGTAGGTTCTCGCgg                                                                    >  1:7823651/3‑93 (MQ=255)

                       ggAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTCTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCgg                                                                    <  1:3519767/93‑1 (MQ=255)

                        gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                   >  1:155461/1‑93 (MQ=255)

                        gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                   >  1:2316293/1‑93 (MQ=255)

                        gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                   >  1:272502/1‑93 (MQ=255)

                         aaTATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGtt                                                                  <  2:7067602/93‑1 (MQ=255)

                          atatGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGttt                                                                 >  2:8486453/1‑93 (MQ=255)

                           tatGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTtg                                                                >  1:1618069/1‑93 (MQ=255)

                             tGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTtgtg                                                              <  2:8088581/93‑1 (MQ=255)

                              gCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTgtgt                                                             <  1:3801466/93‑1 (MQ=255)

                              gCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTgtgt                                                             >  2:6253812/1‑93 (MQ=255)

                               cgtcgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGtt                                                            >  2:1676819/1‑93 (MQ=255)

                                 tcgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCt                                                          >  1:1452962/1‑93 (MQ=255)

                                 tcgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTGTAGGTTCTCGCGGTTTGTGTTCt                                                          >  2:4771650/1‑93 (MQ=255)

                                  cgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTg                                                         <  2:5640326/93‑1 (MQ=255)

                                  cgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTg                                                         >  1:8234613/1‑93 (MQ=255)

                                  cgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTg                                                         >  2:1262483/1‑93 (MQ=255)

                                   gtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGc                                                        >  2:4455894/1‑93 (MQ=255)

                                   gtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGc                                                        >  1:6801972/1‑93 (MQ=255)

                                   gtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGc                                                        <  1:3959745/93‑1 (MQ=255)

                                    ttGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGcc                                                       <  1:4822707/93‑1 (MQ=255)

                                    ttGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGcc                                                       >  2:7849965/1‑93 (MQ=255)

                                    ttGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGcc                                                       <  1:6618731/93‑1 (MQ=255)

                                     tGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGccc                                                      <  2:755303/93‑1 (MQ=255)

                                     tGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGccc                                                      <  2:3557079/93‑1 (MQ=255)

                                     tGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGccc                                                      <  2:5304524/93‑1 (MQ=255)

                                       gCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCg                                                    >  2:3174918/1‑93 (MQ=255)

                                        cGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGc                                                   <  1:3134861/93‑1 (MQ=255)

                                         ggAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCt                                                  <  2:3726308/93‑1 (MQ=255)

                                          gAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtg                                                 >  1:7317650/1‑93 (MQ=255)

                                           aacAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtgt                                                <  1:8328357/91‑1 (MQ=255)

                                           aGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtgt                                                <  2:7743883/93‑1 (MQ=255)

                                            gCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtgtg                                               <  1:5675468/93‑1 (MQ=255)

                                            gCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtgtg                                               >  1:4737513/1‑93 (MQ=255)

                                             cAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtgtgt                                              <  1:6154543/93‑1 (MQ=255)

                                              aGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtgtgtg                                             >  2:1554518/1‑93 (MQ=255)

                                               gAAAGATGAGGCGGTAAGCGCGCAGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCGCCGCTGTGTGc                                            >  2:867523/1‑93 (MQ=255)

                                                  aGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCga                                         <  2:3457688/93‑1 (MQ=255)

                                                  aGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCga                                         <  1:3256082/93‑1 (MQ=255)

                                                  aGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCga                                         >  1:3334899/1‑93 (MQ=255)

                                                    aTGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCgaga                                       >  2:284540/1‑93 (MQ=255)

                                                    aTGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCgaga                                       <  1:6013528/93‑1 (MQ=255)

                                                    aTGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCgaga                                       >  1:4595259/1‑93 (MQ=255)

                                                     tGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGAt                                      <  2:658178/93‑1 (MQ=255)

                                                     tGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGAt                                      <  1:7404895/93‑1 (MQ=255)

                                                     tGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGAt                                      >  1:5478734/1‑93 (MQ=255)

                                                      gAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGAtt                                     <  2:1426068/93‑1 (MQ=255)

                                                       aGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTc                                    <  2:8782959/93‑1 (MQ=255)

                                                       aGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTc                                    >  2:4590268/1‑93 (MQ=255)

                                                        ggCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCt                                   >  2:5559427/1‑93 (MQ=255)

                                                         gCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTg                                  <  1:792863/93‑1 (MQ=255)

                                                            gTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTggcg                               <  1:2805540/93‑1 (MQ=255)

                                                                gcgcgcCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGGTTGTGTTCTGCCCCGCTGTGTGCCGAGATTATGGCGgagc                           >  1:124934/1‑93 (MQ=255)

                                                                 cgcgcCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCa                          <  1:4885193/93‑1 (MQ=255)

                                                                  gcgcCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAg                         >  1:3668827/1‑93 (MQ=255)

                                                                   cgcCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGa                        >  1:7143299/1‑93 (MQ=255)

                                                                   cgcCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGa                        >  2:7235993/1‑93 (MQ=255)

                                                                          ttttGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGcga                 <  1:5800645/93‑1 (MQ=255)

                                                                          ttttGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGcga                 <  1:5201509/93‑1 (MQ=255)

                                                                           tttGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGcgac                <  2:6627600/93‑1 (MQ=255)

                                                                           tttGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGGTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGcgac                >  2:6317461/1‑93 (MQ=255)

                                                                             tGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGcgacga              <  1:760736/93‑1 (MQ=255)

                                                                              gACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGaa             <  1:8257606/93‑1 (MQ=255)

                                                                              gACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGaa             >  1:875359/1‑93 (MQ=255)

                                                                               aCGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAAc            <  1:665826/93‑1 (MQ=255)

                                                                                cGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAAcc           <  2:2154980/93‑1 (MQ=255)

                                                                                 gATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCg          >  1:1000988/1‑93 (MQ=255)

                                                                                   tctcTTTATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGAt        <  2:4375138/93‑1 (MQ=255)

                                                                                     tctTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTc      <  2:2563940/93‑1 (MQ=255)

                                                                                      ctTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTcc     <  1:1478820/93‑1 (MQ=255)

                                                                                         tATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTCCgat  <  1:7009790/93‑1 (MQ=255)

CCCGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTTATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTCCGAT  >  NC_000913/2441524‑2441705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`