Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 241,745 A→G V532A (GTG→GCG)  yafH ← putative acyl‑CoA dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913241,7450AG99.7% 973.3 / ‑5.0 286V532A (GTG→GCG) yafHputative acyl‑CoA dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (170/115);  total (170/116)
Fisher's exact test for biased strand distribution p-value = 4.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.72e-01

Only 100 of 300 total aligned reads displayed.

TTGTTGCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCACGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCAATCGGT  >  NC_000913/241655‑241834
                                                                                          |                                                                                         
ttgttgCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCcgcgcg                                                                                         >  1:8580506/1‑93 (MQ=255)
ttgttgCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGcgcg                                                                                         >  2:6373477/1‑93 (MQ=255)
 tgttgCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGt                                                                                        <  1:1026469/93‑1 (MQ=255)
  gttgCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCCGCGCGTa                                                                                       >  2:3593620/1‑93 (MQ=255)
  gttgCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTa                                                                                       >  2:3891084/1‑93 (MQ=255)
    tgCTACCGACTTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCACCTCTGCCAGCGCGTACg                                                                                     >  2:7833481/1‑93 (MQ=255)
     gCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACgg                                                                                    <  2:1302479/93‑1 (MQ=255)
     gCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACgg                                                                                    <  1:3924792/93‑1 (MQ=255)
     gCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACgg                                                                                    >  1:2168254/1‑93 (MQ=255)
      cTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGa                                                                                   <  2:4429041/93‑1 (MQ=255)
        aCCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATg                                                                                 <  1:5460415/93‑1 (MQ=255)
         ccGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATgg                                                                                <  1:7577593/93‑1 (MQ=255)
         ccGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCACGTACGGATgg                                                                                <  1:3324670/93‑1 (MQ=255)
          cGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGc                                                                               <  1:4089538/93‑1 (MQ=255)
            aCGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCaa                                                                             >  1:6867260/1‑93 (MQ=255)
             cGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAAc                                                                            >  2:3219182/1‑93 (MQ=255)
                gACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGaa                                                                         >  1:2428470/1‑93 (MQ=255)
                 aCCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAAt                                                                        <  2:199780/93‑1 (MQ=255)
                 aCCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAAt                                                                        <  2:1637610/93‑1 (MQ=255)
                  ccGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATc                                                                       >  1:8309723/1‑93 (MQ=255)
                  ccGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATc                                                                       <  1:5697201/93‑1 (MQ=255)
                    gATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGc                                                                     >  2:7163051/1‑93 (MQ=255)
                     atatGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCt                                                                    >  1:1793104/1‑93 (MQ=255)
                     atatGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCt                                                                    >  1:8085170/1‑93 (MQ=255)
                     atatGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCt                                                                    >  2:4083111/1‑93 (MQ=255)
                      tatGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTc                                                                   >  1:2289211/1‑93 (MQ=255)
                       atGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTct                                                                  >  2:7370101/1‑92 (MQ=255)
                        tGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCt                                                                 >  1:1679352/1‑93 (MQ=255)
                        tGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCt                                                                 >  2:1718235/1‑93 (MQ=255)
                        tGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCt                                                                 <  2:310280/93‑1 (MQ=255)
                             gAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTcc                                                            <  2:1018901/93‑1 (MQ=255)
                               acaacaGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGa                                                          >  1:2800679/1‑93 (MQ=255)
                                caacaGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGaa                                                         <  2:5084470/93‑1 (MQ=255)
                                  actgTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGa                                                       <  1:4748903/90‑1 (MQ=255)
                                  acaGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGa                                                       >  1:582652/1‑93 (MQ=255)
                                    aGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGatc                                                     <  2:1204902/93‑1 (MQ=255)
                                      tttATCGAACGCGTTGACGTCATTGTTCTTCGCCTCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGatcat                                                   <  1:5365727/93‑1 (MQ=255)
                                      tttATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGatcat                                                   >  1:4337123/1‑93 (MQ=255)
                                       ttATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGatcatc                                                  <  1:5593260/93‑1 (MQ=255)
                                       ttATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGatcatc                                                  <  2:6606127/93‑1 (MQ=255)
                                       ttATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGatcatc                                                  >  1:2978782/1‑93 (MQ=255)
                                        tATCGAACGCGTTGACGTCATTTTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGAtcatca                                                 <  2:2544821/93‑1 (MQ=255)
                                        tATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGAtcatca                                                 >  1:5122994/1‑93 (MQ=255)
                                        tATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGAtcatca                                                 <  2:7978468/93‑1 (MQ=255)
                                         aTCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATcatcat                                                <  2:3244606/93‑1 (MQ=255)
                                          tCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCAtg                                               >  1:6284464/1‑93 (MQ=255)
                                            gAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCAtgct                                             >  1:5310413/1‑93 (MQ=255)
                                            gAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCAtgct                                             >  2:6558583/1‑93 (MQ=255)
                                             aaCGCGTTGCCGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGCATCGCTCCTTGTCCGAAGATCATCAtgctg                                            >  1:362592/1‑93 (MQ=255)
                                             aaCGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCAtgctg                                            >  1:8129081/1‑93 (MQ=255)
                                             aaCGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCAtgctg                                            >  2:915814/1‑93 (MQ=255)
                                              aCGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCAtgctgc                                           >  2:43218/1‑93 (MQ=255)
                                              aCGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCAtgctgc                                           <  1:2041657/93‑1 (MQ=255)
                                              aCGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCAtgctgc                                           >  2:8651/1‑93 (MQ=255)
                                               cgcgTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCg                                          <  1:8415571/93‑1 (MQ=255)
                                                gcgTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGATCCTTGTCCGAAGATCATCATGCTGCgg                                         >  2:5005629/1‑93 (MQ=255)
                                                 cgTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCggg                                        >  2:2835403/1‑93 (MQ=255)
                                                   ttGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTc                                      <  1:342092/93‑1 (MQ=255)
                                                      aCGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGa                                   <  1:3837484/93‑1 (MQ=255)
                                                        gTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAAt                                 <  1:1289505/93‑1 (MQ=255)
                                                        gTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAAt                                 >  2:2712540/1‑93 (MQ=255)
                                                        gTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGACCGAAGATCGTCATGCTGCGGGTCAGact                                 <  1:7800754/93‑3 (MQ=255)
                                                         tCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCGGAAGATCATCATGCTGCGGGTCAGattt                                >  1:7453983/1‑90 (MQ=255)
                                                         tCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATTATGGTGCGGCTCATAAtt                                >  2:5855069/1‑92 (MQ=255)
                                                          cATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGt                               >  2:3781951/1‑93 (MQ=255)
                                                          cATTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGt                               <  2:4070622/93‑1 (MQ=255)
                                                           aTTGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGtt                              >  2:4615047/1‑93 (MQ=255)
                                                            ttGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTa                             <  2:7625072/93‑1 (MQ=255)
                                                            ttGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTa                             >  2:8353453/1‑93 (MQ=255)
                                                            ttGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTa                             >  1:4285447/1‑93 (MQ=255)
                                                             tGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAg                            <  1:2525470/93‑1 (MQ=255)
                                                             tGTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAg                            <  1:4187622/93‑1 (MQ=255)
                                                              gTTCTTCGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGc                           >  2:3938335/1‑93 (MQ=255)
                                                               ttcttcGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGTAGATCATCATGCTGCGGGTCAGAATGTTAGcc                          >  1:5873866/1‑93 (MQ=255)
                                                               ttcttcGCCGCTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGcc                          <  2:4214281/93‑1 (MQ=255)
                                                                tcttctCCGCTACCATAACTTCCAGCGCGAACGGATGGCAACGAATCGCTCCTTGACCGAAGATCATCATGCTGCGGGTCAGAATGTTAGccc                         <  2:5189090/93‑1 (MQ=255)
                                                                    cgccgcTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTc                     <  1:7895036/93‑1 (MQ=255)
                                                                      ccgcTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCaa                   <  1:6805139/93‑1 (MQ=255)
                                                                      ccgcTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGACCCTTCaa                   >  2:6195855/1‑93 (MQ=255)
                                                                       cgcTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAAc                  >  2:145616/1‑93 (MQ=255)
                                                                        gcTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACg                 >  2:1903109/1‑93 (MQ=255)
                                                                         cTTCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACgg                >  2:5485622/1‑93 (MQ=255)
                                                                          ttCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACggg               >  1:7207728/1‑92 (MQ=255)
                                                                           tCCATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTg              >  2:1946923/1‑93 (MQ=255)
                                                                            ccATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGa             <  1:4442509/93‑1 (MQ=255)
                                                                            ccATCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGa             <  1:2483564/93‑1 (MQ=255)
                                                                              aTCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATg           >  2:8082942/1‑93 (MQ=255)
                                                                              aTCTCTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGCGATg           >  1:650404/1‑93 (MQ=255)
                                                                               tctcTTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATgg          >  2:16522/1‑93 (MQ=255)
                                                                                ccattCGAGCGCGGACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGc         <  1:707151/90‑1 (MQ=255)
                                                                                 tctTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCa        >  2:2343429/1‑93 (MQ=255)
                                                                                  ctTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCaa       >  1:7353624/1‑93 (MQ=255)
                                                                                  ctTCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCaa       >  1:5046315/1‑93 (MQ=255)
                                                                                  ctTCCAGCGCGGACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCaa       <  1:2862066/93‑1 (MQ=255)
                                                                                    tCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCAATc     <  1:2683043/93‑1 (MQ=255)
                                                                                    tCCAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCAATc     >  1:1519831/1‑93 (MQ=255)
                                                                                     ccAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCAATCg    <  2:2501720/93‑1 (MQ=255)
                                                                                      cAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCAATCgg   >  2:6862418/1‑93 (MQ=255)
                                                                                      cAGCGCGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCAATCgg   <  1:6782980/93‑1 (MQ=255)
                                                                                      cAGCGCGTACGGATGGCAACGAATCGCTCCTTGTACGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCAATCgg   <  2:7052011/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTGTTGCTACCGACGTGACCGATATGTTTGAACAACAGTTTATCGAACGCGTTGACGTCATTGTTCTTCGCCGCTTCCATCTCTTCCAGCACGTACGGATGGCAACGAATCGCTCCTTGTCCGAAGATCATCATGCTGCGGGTCAGAATGTTAGCCCCTTCAACGGTGATGGCAATCGGT  >  NC_000913/241655‑241834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: