Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,961,511 C→T G76G (GGG→GGA ppdB ← prepilin peptidase dependent protein B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,961,5110CT99.5% 1369.1 / NA 388G76G (GGG→GGAppdBprepilin peptidase dependent protein B
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base T (189/197);  total (189/199)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 403 total aligned reads displayed.

TCGGACTCTTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGCCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCATCTTCCAG  >  NC_000913/2961419‑2961600
                                                                                            |                                                                                         
  ggACTCTTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGtcc                                                                                         >  2:3299829/1‑93 (MQ=255)
  ggACTCTTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGtcc                                                                                         <  1:4367203/93‑1 (MQ=255)
   gACTCTTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCt                                                                                        <  1:3704790/93‑1 (MQ=255)
   gACTCTTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCt                                                                                        >  2:6536180/1‑93 (MQ=255)
   gACTCTTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCt                                                                                        <  2:6659522/93‑1 (MQ=255)
    aCTCTTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCtt                                                                                       <  2:8592946/93‑1 (MQ=255)
    aCTCTTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCtt                                                                                       <  2:5788687/93‑1 (MQ=255)
     ctctTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTc                                                                                      >  2:174367/1‑93 (MQ=255)
     ctctTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTc                                                                                      >  2:3479498/1‑93 (MQ=255)
      tctTTTCCCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCg                                                                                     <  1:1000764/93‑1 (MQ=255)
      tctTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCg                                                                                     <  1:7518264/93‑1 (MQ=255)
       ctTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGc                                                                                    <  2:675929/93‑1 (MQ=255)
       ctTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGc                                                                                    >  1:1769212/1‑93 (MQ=255)
        ttttACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGcc                                                                                   >  1:7176491/1‑93 (MQ=255)
           tACCGGTTCTCGATCCCAGATACCGTTGCTGAGCGCATCCCACTGCACAATGCCACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGt                                                                                <  1:3613477/93‑1 (MQ=255)
           tACCGGTTCGCGATCCCAGATACCGTTTCTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGt                                                                                <  1:346178/93‑1 (MQ=255)
           tACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGt                                                                                >  1:3944294/1‑93 (MQ=255)
            aCCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTa                                                                               <  2:5861957/93‑1 (MQ=255)
             ccGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTAc                                                                              <  1:2696295/93‑1 (MQ=255)
              cGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACa                                                                             <  2:8269179/93‑1 (MQ=255)
               ggTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAg                                                                            >  2:5310004/1‑93 (MQ=255)
                 gtCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGAt                                                                          <  2:2055305/92‑1 (MQ=255)
                    gcgATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGcc                                                                       >  1:460997/1‑93 (MQ=255)
                     cgATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCa                                                                      <  1:8685096/93‑1 (MQ=255)
                      gATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCAt                                                                     >  1:8387539/1‑93 (MQ=255)
                      gATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCAt                                                                     >  1:6701181/1‑93 (MQ=255)
                      gATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCAt                                                                     <  2:7711766/93‑1 (MQ=255)
                       aTCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATg                                                                    >  1:2729035/1‑93 (MQ=255)
                       aTCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATg                                                                    >  2:2792535/1‑93 (MQ=255)
                       aTCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATg                                                                    >  2:7623300/1‑93 (MQ=255)
                        tCCCAGATACCGTTGCTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGa                                                                   <  1:5115118/93‑1 (MQ=255)
                        tCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGa                                                                   <  1:2568744/93‑1 (MQ=255)
                           cAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACaa                                                                >  2:1197021/1‑93 (MQ=255)
                            aGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAAt                                                               >  1:7715990/1‑93 (MQ=255)
                            aGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAAt                                                               >  2:2632852/1‑93 (MQ=255)
                             gATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATa                                                              <  2:1851875/93‑1 (MQ=255)
                             gATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATa                                                              >  1:5379221/1‑93 (MQ=255)
                               tACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAAc                                                            >  2:8371239/1‑93 (MQ=255)
                               tACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAAc                                                            >  1:8018216/1‑93 (MQ=255)
                                aCCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAAcc                                                           <  2:5420046/93‑1 (MQ=255)
                                aCCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAAcc                                                           <  2:1113928/93‑1 (MQ=255)
                                  cGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCg                                                         <  1:5522139/93‑1 (MQ=255)
                                  cGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCg                                                         >  2:5036601/1‑93 (MQ=255)
                                   gTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGc                                                        >  1:4740601/1‑93 (MQ=255)
                                   cttACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGc                                                        <  2:6099404/92‑1 (MQ=255)
                                    ttACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGcc                                                       <  1:617811/93‑1 (MQ=255)
                                    ttACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGcc                                                       <  2:6297816/93‑1 (MQ=255)
                                     tACTGTTCGCATCCCACTGCACAATGCCACAGGCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGccc                                                      <  1:1627743/93‑1 (MQ=255)
                                     tACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGccc                                                      <  2:4007774/93‑1 (MQ=255)
                                     tACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGccc                                                      <  1:1126474/93‑1 (MQ=255)
                                       cTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCctc                                                    >  1:4133838/1‑93 (MQ=255)
                                       cTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCctc                                                    <  2:6845376/93‑1 (MQ=255)
                                        tGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCctct                                                   >  1:6967804/1‑93 (MQ=255)
                                         gTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTg                                                  >  2:4844087/1‑93 (MQ=255)
                                          ttCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTgg                                                 <  2:8499603/93‑1 (MQ=255)
                                          ttCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTgg                                                 >  2:2288341/1‑93 (MQ=255)
                                           tCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGga                                                <  2:8543707/93‑1 (MQ=255)
                                            cGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTGCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGgag                                               <  1:3847666/93‑1 (MQ=255)
                                            cGCATCCCACTGCAAAATGACACAGTCACCCTGTCCGCCACTTTCCAGCGCTTACCCGGTCCAGATGCCATGACACTAACCACCTCTCTGcag                                               >  1:6554429/1‑93 (MQ=255)
                                             gCATCCCACTGCACAATGACACAGTCACCTTGTCCGACAATTTCCGGTCCTTCGCCGGAAAGATGCCCTGACAATAACCCGCCCCCTGGAGAt                                             >  2:1943479/1‑93 (MQ=255)
                                             gCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTGCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGgaga                                              <  2:291254/93‑1 (MQ=255)
                                             gCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGgaga                                              >  2:7926301/1‑93 (MQ=255)
                                              cATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGAt                                             <  1:5490862/93‑1 (MQ=255)
                                               aTCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCACCCTCTGGAGATg                                            >  2:4721195/1‑93 (MQ=255)
                                                tCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGc                                           <  1:196842/93‑1 (MQ=255)
                                                  ccACTGCACAATGACACAGGCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCACGACAATAACCCGCCCTCTGGAGATGCtt                                         >  1:7805535/1‑93 (MQ=255)
                                                   cACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTc                                        >  2:4388240/1‑93 (MQ=255)
                                                   cACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTc                                        >  1:5166193/1‑93 (MQ=255)
                                                    aCTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTcg                                       >  2:703693/1‑93 (MQ=255)
                                                      tGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTcgcg                                     <  2:7992670/93‑1 (MQ=255)
                                                         acaATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACg                                  >  2:6915509/1‑93 (MQ=255)
                                                          caATGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACgg                                 <  1:5083645/93‑1 (MQ=255)
                                                           aaTGACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGt                                >  1:3138867/1‑93 (MQ=255)
                                                              gACACAGTCACCTTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTaaa                             <  1:8731916/93‑1 (MQ=255)
                                                              gACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTaaa                             >  2:3790137/1‑93 (MQ=255)
                                                              gACACAGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTaaa                             >  1:605617/1‑93 (MQ=255)
                                                                cacaGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATa                           >  2:1259266/1‑93 (MQ=255)
                                                                cacaGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATa                           <  1:24692/93‑1 (MQ=255)
                                                                  caGTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATAcc                         <  1:2829627/93‑1 (MQ=255)
                                                                   cgTCACCCTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATAccc                        <  1:3293749/92‑1 (MQ=255)
                                                                        cccTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGc                   >  1:4888195/1‑93 (MQ=255)
                                                                         ccTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGcc                  >  2:1442995/1‑93 (MQ=255)
                                                                         ccTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGcc                  >  2:310957/1‑93 (MQ=255)
                                                                          cTGTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCa                 >  1:4515925/1‑93 (MQ=255)
                                                                            gTCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGa               <  1:3033966/93‑1 (MQ=255)
                                                                             tCCGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGAt              >  2:5561567/1‑93 (MQ=255)
                                                                              ccGACAATTTCCCGGCCTTCGCATGTACATATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGAtt             <  1:1879534/93‑1 (MQ=255)
                                                                              ccGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGAtt             >  1:5256219/1‑93 (MQ=255)
                                                                               cGACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGAttt            >  1:6815042/1‑93 (MQ=255)
                                                                                gACAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTc           <  1:5743207/93‑1 (MQ=255)
                                                                                 aCAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCa          >  1:6303869/1‑93 (MQ=255)
                                                                                  cAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCAt         <  2:617980/93‑1 (MQ=255)
                                                                                  cAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCAt         >  1:637194/1‑93 (MQ=255)
                                                                                  cAATTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCAt         <  1:2281220/93‑1 (MQ=255)
                                                                                    aTTTCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCATCt       <  2:4503374/93‑1 (MQ=255)
                                                                                       tCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCATCTTcc    <  2:7373647/93‑1 (MQ=255)
                                                                                       tCCAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCATCTTcc    <  2:4114608/93‑1 (MQ=255)
                                                                                        ccAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCATCTTCCa   >  2:2685952/1‑93 (MQ=255)
                                                                                        ccAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCATCTTCCa   <  2:5605718/93‑1 (MQ=255)
                                                                                         cAGTCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCATCTTCCAg  >  1:941888/1‑93 (MQ=255)
                                                                                            |                                                                                         
TCGGACTCTTTTACCGGTTCGCGATCCCAGATACCGTTACTGTTCGCATCCCACTGCACAATGACACAGTCACCCTGTCCGACAATTTCCAGCCCTTCGCCGGTACAGATGCCATGACAATAACCCGCCCTCTGGAGATGCTTCGCGACGGTAAATACCCGCAGCCAGATTTCATCTTCCAG  >  NC_000913/2961419‑2961600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: