BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	276,473	T→C	L179L (TTG→CTG)	yagD →	YagD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	276,473	0	T	C	100.0%	859.3 / NA	253	L179L (TTG→CTG)	yagD	YagD
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (135/118); total (135/118)

Only 100 of 263 total aligned reads displayed.

TTTCATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTACGCC  >  NC_000913/276383‑276561

tttCATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTg                                                                                        <  1:8347313/93‑1 (MQ=255)

tttCATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTg                                                                                        >  1:6518493/1‑93 (MQ=255)

  tCATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGc                                                                                      >  1:1405788/1‑93 (MQ=255)

  tCATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGc                                                                                      <  2:4869091/93‑1 (MQ=255)

   cATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGcc                                                                                     >  1:4546403/1‑93 (MQ=255)

   cATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGcc                                                                                     >  2:6942131/1‑93 (MQ=255)

    aTCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCg                                                                                    >  2:8504270/1‑93 (MQ=255)

    aTCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGACg                                                                                    >  2:8105090/1‑93 (MQ=255)

       gCCCGCGCGGGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAAGCCTGCCGAATTGTTCCGAGAGTGGGGGGCTGGcccggg                                                                                 >  1:81438/1‑89 (MQ=255)

          cgcgcgTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGt                                                                              >  2:3197250/1‑93 (MQ=255)

           gcgcgTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGtt                                                                             <  1:1004802/93‑1 (MQ=255)

           gcgcgTGGAAGCCGTGCGGGATGCCGGGGCCTGTCTGCTGGCCGGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGtt                                                                             <  1:2295527/93‑1 (MQ=255)

            cgcgTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTg                                                                            <  2:2188917/93‑1 (MQ=255)

             gcgTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGa                                                                           <  1:1816313/93‑1 (MQ=255)

                tGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCg                                                                        <  1:4305422/93‑1 (MQ=255)

                tGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCg                                                                        >  1:3335365/1‑93 (MQ=255)

                 ggAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGc                                                                       >  2:1286267/1‑93 (MQ=255)

                 ggAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGc                                                                       >  1:896212/1‑93 (MQ=255)

                 ggAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGc                                                                       >  2:8280096/1‑93 (MQ=255)

                  gAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCa                                                                      <  1:7280215/93‑1 (MQ=255)

                  gAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCa                                                                      >  1:6676323/1‑93 (MQ=255)

                   aaGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCat                                                                     >  2:8421430/1‑93 (MQ=255)

                    aGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCata                                                                    <  1:8215856/93‑1 (MQ=255)

                    aGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCata                                                                    >  2:4840907/1‑93 (MQ=255)

                        ttGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCcg                                                                >  1:778369/1‑93 (MQ=255)

                         tGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCcgc                                                               <  2:1030607/93‑1 (MQ=255)

                         tGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCcgc                                                               <  1:7126976/93‑1 (MQ=255)

                           gtGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGt                                                             <  2:7542400/92‑1 (MQ=255)

                           cTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGt                                                             <  1:8695126/93‑1 (MQ=255)

                           cTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGt                                                             <  1:5531417/93‑1 (MQ=255)

                            tGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTg                                                            >  1:1075833/1‑93 (MQ=255)

                             ggATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTgc                                                           <  2:1701833/93‑1 (MQ=255)

                             ggATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTgc                                                           <  2:4226181/93‑1 (MQ=255)

                              gATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTgcg                                                          >  1:498930/1‑93 (MQ=255)

                              gATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTgcg                                                          <  1:4110021/93‑1 (MQ=255)

                              gATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTgcg                                                          <  1:442684/93‑1 (MQ=255)

                                tGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGcgcg                                                        <  2:3087887/93‑1 (MQ=255)

                                tGCAGGGGCCTTTCTGCTGGCCTGCGAAACCCAGACGATTTTTTCCGAGATTGAGGCGCTGGCCGGGCTGTTGACGGCATATCCGCGTGcgcg                                                        <  2:1099340/93‑1 (MQ=255)

                                   cGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGc                                                     >  2:4038240/1‑93 (MQ=255)

                                    ggggCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCg                                                    >  1:8518763/1‑93 (MQ=255)

                                     gggCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACGGCATATCCGCGTGCGCGGGCGt                                                   >  1:1991920/1‑93 (MQ=255)

                                     gggCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGt                                                   <  1:7585821/93‑1 (MQ=255)

                                      ggCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTg                                                  <  2:6828764/93‑1 (MQ=255)

                                       gCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTgg                                                 >  1:5232840/1‑93 (MQ=255)

                                        ccGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGt                                                >  1:3886810/1‑93 (MQ=255)

                                         cGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGtt                                               <  2:6651558/93‑1 (MQ=255)

                                          gATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTtc                                              <  2:6422130/93‑1 (MQ=255)

                                          gATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTtc                                              >  2:7909279/1‑93 (MQ=255)

                                           aTCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTtct                                             >  1:478092/1‑93 (MQ=255)

                                           aTCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTtct                                             >  2:4592490/1‑93 (MQ=255)

                                             ctgctgGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCa                                           >  1:7234510/1‑93 (MQ=255)

                                               gctgGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGGGCGGGCGTGGTTCTCAtt                                         >  1:1905806/1‑93 (MQ=255)

                                                 tgGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTa                                       >  1:4256756/1‑93 (MQ=255)

                                                  ggCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTAc                                      >  2:3556497/1‑93 (MQ=255)

                                                   gCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTAcc                                     >  1:2961226/1‑93 (MQ=255)

                                                    ccTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTAccc                                    <  2:71842/93‑1 (MQ=255)

                                                    ccTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTAccc                                    <  2:7892340/93‑1 (MQ=255)

                                                     cTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCt                                   >  1:4487972/1‑93 (MQ=255)

                                                      tGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTg                                  <  2:2468113/93‑1 (MQ=255)

                                                       gCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTgc                                 <  1:3715717/93‑1 (MQ=255)

                                                       gCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTgc                                 <  1:1619969/93‑1 (MQ=255)

                                                       gCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTgc                                 <  1:6837771/93‑1 (MQ=255)

                                                        cGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTgcg                                >  1:5343788/1‑93 (MQ=255)

                                                         gAAACCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTgcgc                               >  2:142886/1‑93 (MQ=255)

                                                           aaCCCTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGa                             <  2:8673583/93‑1 (MQ=255)

                                                             cccTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACa                           <  1:588214/93‑1 (MQ=255)

                                                             cccTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACa                           >  1:2541110/1‑93 (MQ=255)

                                                             cccTCCCGAATTTTTCCGAGATTGAGTCGCTGGCCGATCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACa                           <  2:5745973/93‑1 (MQ=255)

                                                              cccgCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAg                          >  1:5114656/4‑93 (MQ=255)

                                                              ccTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAg                          <  2:5927301/93‑1 (MQ=255)

                                                               cTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGc                         <  1:734023/93‑1 (MQ=255)

                                                               cTGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGc                         <  2:5039750/93‑1 (MQ=255)

                                                                tGCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCg                        <  1:6969414/93‑1 (MQ=255)

                                                                 gCCGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGa                       >  1:1197832/1‑93 (MQ=255)

                                                                   cGAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAac                     <  1:8293628/93‑1 (MQ=255)

                                                                    gAATTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAaca                    <  1:2987309/93‑1 (MQ=255)

                                                                     aaTTTTTCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAacac                   <  1:7025189/93‑1 (MQ=255)

                                                                       tttttCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCt                 >  2:6329040/1‑93 (MQ=255)

                                                                         tttCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGa               <  2:1839582/93‑1 (MQ=255)

                                                                         tttCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGa               <  1:6599108/93‑1 (MQ=255)

                                                                          ttCCGGGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAg              >  1:2242608/1‑93 (MQ=255)

                                                                          ttCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAg              >  2:4369167/1‑93 (MQ=255)

                                                                          ttCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAg              <  1:4801494/93‑1 (MQ=255)

                                                                          ttCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAg              >  1:8055537/1‑93 (MQ=255)

                                                                           tCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACTCTGCGCGACAGCGAACACCTGAGc             >  1:7483721/1‑93 (MQ=255)

                                                                           tCCGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGc             <  1:1490197/93‑1 (MQ=255)

                                                                            ccGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCg            <  1:3355739/93‑1 (MQ=255)

                                                                            ccGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCg            <  1:2869522/93‑1 (MQ=255)

                                                                             cGAGATTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGa           <  1:2954988/93‑1 (MQ=255)

                                                                              gagaTTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGAc          <  1:1286267/93‑1 (MQ=255)

                                                                               agaTTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACg         <  2:8189407/93‑1 (MQ=255)

                                                                                gcttGAGGCGATGGCCGAGCTGTTGACCGCAAATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACgg        <  2:7469394/91‑1 (MQ=255)

                                                                                 aTTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGt       <  2:5280656/93‑1 (MQ=255)

                                                                                 aTTGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGt       >  2:3943439/1‑93 (MQ=255)

                                                                                  ttaaGGCGCAGGCCGAGCTGTTGACCACATATCAGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACAAAAGCGACGGTa      <  2:7800688/90‑1 (MQ=255)

                                                                                  ttGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTa      >  2:61764/1‑93 (MQ=255)

                                                                                  ttGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTa      <  2:1875513/93‑1 (MQ=255)

                                                                                  ttGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTa      <  1:963231/93‑1 (MQ=255)

                                                                                   tGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTAc     <  2:2932713/93‑1 (MQ=255)

                                                                                   tGAGGCGCTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTAc     <  2:4126244/93‑1 (MQ=255)

TTTCATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTACGCC  >  NC_000913/276383‑276561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`