BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,167,940	G→A	G33S (GGT→AGT)	qseB →	quorum sensing regulator B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,167,940	0	G	A	100.0%	1481.4 / NA	409	G33S (GGT→AGT)	qseB	quorum sensing regulator B
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (211/198); total (211/198)

Only 100 of 417 total aligned reads displayed.

ATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATAT  >  NC_000913/3167850‑3168028

acttttCTGATAGAAGATGACATGCTGATTGGTGACGGCATCAAAACGGGCTTTAGTAAAATGGGTTTGAGCGTCGACTGGTTTACACAAAgt                                                                                        >  1:7811595/3‑93 (MQ=255)

 ttttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtc                                                                                       <  1:1216979/93‑1 (MQ=255)

 ttttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtc                                                                                       >  1:8507218/1‑93 (MQ=255)

  tttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcg                                                                                      >  2:2693907/1‑93 (MQ=255)

   ttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGACGACTGGTTTACACAAAgtcgt                                                                                     >  1:8095352/1‑93 (MQ=255)

    tACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcgtc                                                                                    <  1:662208/93‑1 (MQ=255)

       tGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAgg                                                                                 >  1:4586997/1‑93 (MQ=255)

       tGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAgg                                                                                 <  2:5321357/93‑1 (MQ=255)

        gATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAggg                                                                                >  2:282136/1‑93 (MQ=255)

        gATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAgga                                                                                >  1:2980780/1‑92 (MQ=255)

         aTAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGa                                                                               >  1:3114362/1‑93 (MQ=255)

            gaagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGaaaa                                                                            <  2:6020499/93‑1 (MQ=255)

            gaagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGaaaa                                                                            <  1:6371881/93‑1 (MQ=255)

            gaagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGaaaa                                                                            <  2:7960320/93‑1 (MQ=255)

             aagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAag                                                                           >  1:2257970/1‑93 (MQ=255)

              agaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAaga                                                                          >  1:7960159/1‑93 (MQ=255)

               gaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAagag                                                                         >  2:1785328/1‑93 (MQ=255)

               gaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAagag                                                                         >  2:633775/1‑93 (MQ=255)

               gaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAagag                                                                         >  2:6176185/1‑93 (MQ=255)

                aTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAgg                                                                        <  2:3458670/93‑1 (MQ=255)

                 tGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGgc                                                                       <  1:7545121/93‑1 (MQ=255)

                   aCATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGgcgc                                                                     <  1:7299021/93‑1 (MQ=255)

                    cATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCt                                                                    <  2:4903072/93‑1 (MQ=255)

                      tGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCttt                                                                  >  1:4169021/1‑93 (MQ=255)

                      tGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCttt                                                                  <  2:3388150/93‑1 (MQ=255)

                      tGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCttt                                                                  >  1:986385/1‑93 (MQ=255)

                      tGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCttt                                                                  >  2:5518049/1‑93 (MQ=255)

                       gCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTta                                                                 <  1:5827052/93‑1 (MQ=255)

                        cTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTtat                                                                <  1:8184575/93‑1 (MQ=255)

                         tGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTtata                                                               <  1:2528434/93‑1 (MQ=255)

                         tGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTtata                                                               >  2:1178487/1‑93 (MQ=255)

                          gATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAg                                                              <  1:2383449/93‑1 (MQ=255)

                           aTTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAgc                                                             <  2:7577564/93‑1 (MQ=255)

                           aTTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAgc                                                             >  1:5279/1‑93 (MQ=255)

                           aTTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAgc                                                             <  1:8776354/93‑1 (MQ=255)

                               gCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTGTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCAc                                                         >  1:1534094/1‑93 (MQ=255)

                                cGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGAAcc                                                        <  2:3955149/93‑1 (MQ=255)

                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCt                                                       >  1:1386983/1‑93 (MQ=255)

                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCt                                                       >  2:1475511/1‑93 (MQ=255)

                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCt                                                       >  1:6019766/1‑93 (MQ=255)

                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCt                                                       <  2:3516896/93‑1 (MQ=255)

                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGACGCGCTTTATAGCGCACCt                                                       >  2:3743474/1‑93 (MQ=255)

                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTGTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCt                                                       <  1:4943173/93‑1 (MQ=255)

                                  aCGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCtt                                                      >  2:7871732/1‑93 (MQ=255)

                                   cGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTa                                                     <  1:1042379/93‑1 (MQ=255)

                                   cGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTa                                                     <  2:8150497/93‑1 (MQ=255)

                                      cATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatga                                                  <  2:7756898/93‑1 (MQ=255)

                                        tCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatgatg                                                >  2:6988982/1‑93 (MQ=255)

                                         cAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGc                                               <  2:2922897/93‑1 (MQ=255)

                                           aaaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCgg                                             <  1:1966665/93‑1 (MQ=255)

                                           aaaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCgg                                             <  2:7175359/93‑1 (MQ=255)

                                            aaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGt                                            <  2:3099438/93‑1 (MQ=255)

                                            aaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGt                                            <  2:519418/93‑1 (MQ=255)

                                             aCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTg                                           >  1:1899777/1‑93 (MQ=255)

                                               gggCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGGGCACCTTATGATGCGGTGAt                                         >  1:1726525/1‑93 (MQ=255)

                                               gggCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGAt                                         <  2:411422/93‑1 (MQ=255)

                                                 gCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATcc                                       <  2:8661169/93‑1 (MQ=255)

                                                 gCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATcc                                       >  1:6639204/1‑93 (MQ=255)

                                                 gCCTTAGTAAAATGGGTTTTAGCGTCGACTGGATTACACCAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCtgtgttgc                                       >  1:6467343/1‑89 (MQ=255)

                                                   cTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTg                                     >  2:2351758/1‑93 (MQ=255)

                                                   cTTAGTAAAATGGGTTTTAGCCTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTg                                     >  2:4341860/1‑93 (MQ=255)

                                                    ttAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTgg                                    <  1:2819978/93‑1 (MQ=255)

                                                    ttAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTgg                                    >  1:5058715/1‑93 (MQ=255)

                                                     tAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGa                                   >  2:5137511/1‑93 (MQ=255)

                                                     tAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGa                                   <  2:7687/93‑1 (MQ=255)

                                                      aGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGAt                                  >  1:2218248/1‑93 (MQ=255)

                                                       gTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGAtt                                 >  2:2237018/1‑93 (MQ=255)

                                                         aaaaTGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTa                               <  2:6850955/93‑1 (MQ=255)

                                                         aaaaTGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTa                               >  2:5811601/1‑93 (MQ=255)

                                                             tGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCt                           >  2:6485447/1‑93 (MQ=255)

                                                              gggTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAAAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCtt                          >  2:7077185/1‑93 (MQ=255)

                                                               ggTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTa                         <  2:2147570/93‑1 (MQ=255)

                                                                 ttttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAcc                       >  2:8460924/1‑93 (MQ=255)

                                                                 ttttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAcc                       <  2:1926985/93‑1 (MQ=255)

                                                                  tttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCa                      >  1:6162076/1‑93 (MQ=255)

                                                                  tttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCa                      <  1:3711810/93‑1 (MQ=255)

                                                                  tttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCa                      >  2:4656114/1‑93 (MQ=255)

                                                                  tttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCa                      <  1:3596971/93‑1 (MQ=255)

                                                                      tcGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCa                  <  1:6797244/92‑1 (MQ=255)

                                                                      gCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCa                  >  2:7444936/1‑93 (MQ=255)

                                                                      gCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCa                  <  1:3425098/93‑1 (MQ=255)

                                                                       cGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCat                 <  2:4205561/93‑1 (MQ=255)

                                                                        gTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatg                <  2:6754078/93‑1 (MQ=255)

                                                                          cGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatgga              <  1:7670011/93‑1 (MQ=255)

                                                                            aCTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACTTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatg            >  1:687940/1‑93 (MQ=255)

                                                                            aCTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatg            >  1:1145281/1‑93 (MQ=255)

                                                                            aCTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatg            <  1:7422875/93‑1 (MQ=255)

                                                                            aCTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatg            >  1:5383315/1‑93 (MQ=255)

                                                                            aCTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatg            <  1:4051553/93‑1 (MQ=255)

                                                                             cTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatgg           >  2:873544/1‑93 (MQ=255)

                                                                              tGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGt          <  2:1339267/93‑1 (MQ=255)

                                                                               ggTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTc         >  2:3631469/1‑93 (MQ=255)

                                                                               ggTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTc         >  1:7202915/1‑93 (MQ=255)

                                                                               ggTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTc         <  1:5184098/93‑1 (MQ=255)

                                                                                 tttACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTcgc       <  2:801707/93‑1 (MQ=255)

                                                                                   tACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCGCCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGa     <  1:561157/93‑1 (MQ=255)

                                                                                   tACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGa     >  2:2502150/1‑93 (MQ=255)

                                                                                   tACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGa     <  2:727800/93‑1 (MQ=255)

                                                                                     cacaAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGata   >  1:551016/1‑93 (MQ=255)

                                                                                      acaAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGatat  >  1:4353885/1‑93 (MQ=255)

ATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATAT  >  NC_000913/3167850‑3168028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`