BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,242,993	A→G	T84A (ACC→GCC)	exuT →	ExuT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,242,993	0	A	G	99.7%	1178.3 / NA	340	T84A (ACC→GCC)	exuT	ExuT
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (154/185); minor base T (0/1); total (154/186)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 356 total aligned reads displayed.

CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT  >  NC_000913/3242903‑3243082

cTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGcc                                                                                         <  1:6934550/93‑1 (MQ=255)

cTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGcc                                                                                         >  2:8157339/1‑93 (MQ=255)

cTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGcc                                                                                         >  2:805302/1‑93 (MQ=255)

     gACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACa                                                                                    <  1:500911/93‑1 (MQ=255)

       cGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGt                                                                                  <  2:3681792/93‑1 (MQ=255)

       cGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGt                                                                                  >  2:429086/1‑93 (MQ=255)

        gCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTa                                                                                 <  2:2791534/93‑1 (MQ=255)

         cTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAt                                                                                <  1:7828059/93‑1 (MQ=255)

          tCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAtt                                                                               >  2:4826063/1‑93 (MQ=255)

          tCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAtt                                                                               >  1:2530394/1‑93 (MQ=255)

          tCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAtt                                                                               >  2:2884485/1‑93 (MQ=255)

               cccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtat                                                                          <  2:7656103/92‑1 (MQ=255)

               aCCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtat                                                                          >  1:8412021/1‑93 (MQ=255)

               aCCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtat                                                                          <  1:6827025/93‑1 (MQ=255)

               aCCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTAAAACATCTCCGCCCAACAGTATTCCtat                                                                          <  2:5306335/93‑1 (MQ=255)

                ccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtata                                                                         <  2:3453532/93‑1 (MQ=255)

                 cGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTatat                                                                        <  1:8725469/93‑1 (MQ=255)

                  gTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatc                                                                       <  1:2785855/93‑1 (MQ=255)

                    gCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatcat                                                                     <  1:6757017/93‑1 (MQ=255)

                     gttGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatcatc                                                                    <  1:2373788/92‑1 (MQ=255)

                     cTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAGCATCTCCGCCCAACAGTATTCCTATatcatc                                                                    >  1:6389367/1‑93 (MQ=255)

                      ttGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCg                                                                   <  1:5528947/93‑1 (MQ=255)

                      ttGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCg                                                                   <  1:5672582/93‑1 (MQ=255)

                      ttGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCg                                                                   <  1:2924636/93‑1 (MQ=255)

                       tGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGc                                                                  <  1:7493903/93‑1 (MQ=255)

                        ggTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCa                                                                 >  2:273839/1‑93 (MQ=255)

                        ggTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCa                                                                 >  1:8080617/1‑93 (MQ=255)

                           tACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGcc                                                              <  2:3048418/93‑1 (MQ=255)

                            aCCTGACGCGTAACACTGTGGCGGGAGCTACGCCAACTCTGGTGGAAGAGATAAACATCTCCGCCCAACAGGCTTCCTATATCATCGTAGTCt                                                             >  2:1771248/1‑93 (MQ=255)

                              cTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAt                                                           <  2:1668536/93‑1 (MQ=255)

                              cTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAt                                                           <  2:3086956/93‑1 (MQ=255)

                                taCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTc                                                         <  2:3941713/92‑1 (MQ=255)

                                gACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTc                                                         >  1:7135243/1‑93 (MQ=255)

                                gACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTc                                                         >  1:1133555/1‑93 (MQ=255)

                                 aCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTct                                                        <  2:6252764/93‑1 (MQ=255)

                                 aCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTct                                                        <  2:8527545/93‑1 (MQ=255)

                                   gcgTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTctgc                                                      <  1:7644807/93‑1 (MQ=255)

                                    cgTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTctgct                                                     <  1:7261865/93‑1 (MQ=255)

                                          acTGTGGCGGCAGCTGCGCCGACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTtat                                               >  1:339829/1‑93 (MQ=255)

                                           cTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTtata                                              <  2:5124471/93‑1 (MQ=255)

                                           cTGTGGCGGCAGCTGCGCCAACTCCGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTtata                                              <  1:1505106/93‑1 (MQ=255)

                                            tgtgGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATAc                                             <  1:8235171/93‑1 (MQ=255)

                                             gtgGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACg                                            >  2:794839/1‑93 (MQ=255)

                                               ggcggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGt                                          <  2:2007098/93‑1 (MQ=255)

                                                 cggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCa                                        >  2:8701082/1‑93 (MQ=255)

                                                  ggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCAt                                       <  1:7928309/93‑1 (MQ=255)

                                                  ggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCAt                                       <  2:7076717/93‑1 (MQ=255)

                                                   gcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGATGCTTATACGGTCAtt                                      >  2:4096203/1‑92 (MQ=255)

                                                    cAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGc                                     <  2:7272815/93‑1 (MQ=255)

                                                     aGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCa                                    >  2:2828338/1‑93 (MQ=255)

                                                     aGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGGATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCa                                    >  1:592095/1‑93 (MQ=255)

                                                      gCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCaa                                   >  1:1738508/1‑93 (MQ=255)

                                                      gCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCaa                                   >  2:6786054/1‑93 (MQ=255)

                                                      gCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCaa                                   <  2:357179/93‑1 (MQ=255)

                                                       cTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAc                                  >  2:2269527/1‑93 (MQ=255)

                                                       cTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAc                                  <  1:4299982/93‑1 (MQ=255)

                                                       cTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAc                                  <  2:1583362/93‑1 (MQ=255)

                                                        tGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAcc                                 <  2:1480856/93‑1 (MQ=255)

                                                        tGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAcc                                 >  1:4768208/1‑93 (MQ=255)

                                                           gcCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGt                              <  1:3202931/93‑1 (MQ=255)

                                                            ccAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTa                             >  2:5851811/1‑93 (MQ=255)

                                                             cAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAg                            <  1:2147110/93‑1 (MQ=255)

                                                             cAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAg                            >  2:1077681/1‑93 (MQ=255)

                                                             cAAATCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAg                            <  1:437329/93‑1 (MQ=255)

                                                              aaCTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGc                           <  2:2570591/93‑1 (MQ=255)

                                                               aCTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCa                          <  1:3240123/93‑1 (MQ=255)

                                                               aCTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCa                          >  2:4401870/1‑93 (MQ=255)

                                                                ctctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAg                         >  1:3665946/1‑93 (MQ=255)

                                                                ctctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAg                         >  1:3940513/1‑93 (MQ=255)

                                                                ctctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAg                         <  2:4778431/93‑1 (MQ=255)

                                                                 tctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAgg                        <  1:7099159/93‑1 (MQ=255)

                                                                 tctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAgg                        >  2:6875295/1‑93 (MQ=255)

                                                                 tctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAgg                        >  2:1495307/1‑93 (MQ=255)

                                                                   tGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGtt                      <  1:996867/93‑1 (MQ=255)

                                                                    gATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTa                     <  1:4167177/93‑1 (MQ=255)

                                                                      tGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGTAGGTTATg                   <  2:5152368/93‑1 (MQ=255)

                                                                       ggAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGt                  >  1:2061322/1‑93 (MQ=255)

                                                                        gAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTa                 >  2:2667749/1‑93 (MQ=255)

                                                                        gAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTa                 >  1:5742980/1‑93 (MQ=255)

                                                                           gagTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTg              >  2:3237375/1‑93 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            >  2:8196847/1‑93 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            >  2:7447776/1‑93 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            <  2:6507250/93‑1 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            <  1:5174730/93‑1 (MQ=255)

                                                                              ttAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAt           <  2:750138/93‑1 (MQ=255)

                                                                               tAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAtg          <  2:6328603/93‑1 (MQ=255)

                                                                               tAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAtg          >  1:5123448/1‑93 (MQ=255)

                                                                                 aaCATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCCTGCAACCGGTAGCAGGTTATGTACTGGAtgtg        >  1:3814934/1‑93 (MQ=255)

                                                                                  aCATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGc       >  2:6078263/1‑93 (MQ=255)

                                                                                  aCATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGc       >  2:1216758/1‑93 (MQ=255)

                                                                                    aTCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTg     >  2:8452180/1‑93 (MQ=255)

                                                                                    aTCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTg     >  1:6333586/1‑93 (MQ=255)

                                                                                    aTCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTg     <  1:7366751/93‑1 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    <  2:6684141/93‑1 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    >  1:6238662/1‑93 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    >  1:1858100/1‑93 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    <  1:8647723/93‑1 (MQ=255)

                                                                                      ctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTggg   >  2:3278173/1‑93 (MQ=255)

                                                                                       tcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGt  <  1:3002897/93‑1 (MQ=255)

                                                                                       tcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGt  >  2:5934247/1‑93 (MQ=255)

CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT  >  NC_000913/3242903‑3243082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`