Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 320,122 T→C A224A (GCT→GCC ykgD → putative ARAC‑type regulatory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913320,1220TC99.3% 1017.5 / ‑3.6 299A224A (GCT→GCCykgDputative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (119/178);  total (120/179)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01

Only 100 of 328 total aligned reads displayed.

GACCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGCTA  >  NC_000913/320032‑320211
                                                                                          |                                                                                         
gACCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGt                                                                                         >  1:4204475/1‑93 (MQ=255)
 aCCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTa                                                                                        <  2:4204475/93‑1 (MQ=255)
 aCCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTa                                                                                        >  1:2317082/1‑93 (MQ=255)
  ccGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTAt                                                                                       <  2:7493247/93‑1 (MQ=255)
  ccGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTAt                                                                                       <  2:589602/93‑1 (MQ=255)
   cGTCGACTCGCGGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAGCCACGCCGCTGGCCGTAtt                                                                                      <  2:2663073/93‑1 (MQ=255)
   cGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTAtt                                                                                      >  2:2094100/1‑93 (MQ=255)
    gTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTa                                                                                     >  2:4601316/1‑93 (MQ=255)
     tCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTaa                                                                                    >  1:1223126/1‑93 (MQ=255)
      cGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAAc                                                                                   >  2:4046701/1‑93 (MQ=255)
       gAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACa                                                                                  >  2:3883575/1‑93 (MQ=255)
       gAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACa                                                                                  >  2:600502/1‑93 (MQ=255)
         aTCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACaaa                                                                                >  1:1701373/1‑93 (MQ=255)
         aTCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACaaa                                                                                <  2:5381053/93‑1 (MQ=255)
          tCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAg                                                                               >  2:2028078/1‑93 (MQ=255)
           cGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGt                                                                              <  1:6411849/93‑1 (MQ=255)
           cGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGt                                                                              <  2:6096340/93‑1 (MQ=255)
            gCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGtt                                                                             >  1:6626483/1‑93 (MQ=255)
             gtGGCCAGCATCGTGCACATGTCCCGGGCAATTTTTGCCCAGCTTTCCCGTGATGTTTCCGGAACCCCGCCGCTGGCCGTATTAACAAAGTTg                                                                            <  2:6635645/92‑1 (MQ=255)
             cTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTg                                                                            <  1:1816148/93‑1 (MQ=255)
              tGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGc                                                                           >  2:8382183/1‑93 (MQ=255)
               ggCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCg                                                                          <  2:1935550/93‑1 (MQ=255)
                gCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGt                                                                         >  1:3152164/1‑93 (MQ=255)
                gCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGt                                                                         >  1:6001375/1‑93 (MQ=255)
                 ccAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTc                                                                        >  1:2262079/1‑93 (MQ=255)
                 ccAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTc                                                                        <  1:1563981/93‑1 (MQ=255)
                 ccAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTc                                                                        >  1:5696806/1‑93 (MQ=255)
                  cAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCt                                                                       <  2:4374326/93‑1 (MQ=255)
                  cAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCt                                                                       >  2:3665429/1‑93 (MQ=255)
                     cATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACa                                                                    >  1:3826504/1‑93 (MQ=255)
                      aTCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACaa                                                                   >  1:8186975/1‑93 (MQ=255)
                         gCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATa                                                                >  1:5004647/1‑93 (MQ=255)
                           tCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGc                                                              >  2:7791753/1‑93 (MQ=255)
                           tCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGc                                                              >  2:2869030/1‑93 (MQ=255)
                            cacaTGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCg                                                             <  1:1129238/93‑1 (MQ=255)
                            cacaTGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCg                                                             <  2:7283190/93‑1 (MQ=255)
                             acaTGTCCCGGGCAATTTTTGCCCAGCTTTTCCGTGATGTTTCCTGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGGCTACAAATAGCgg                                                            <  2:5613529/93‑1 (MQ=255)
                             acaTGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCgg                                                            >  1:5112697/1‑93 (MQ=255)
                              caTGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGc                                                           >  2:4440211/1‑93 (MQ=255)
                              caTGTCCCGGAGAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGc                                                           <  1:2611854/93‑1 (MQ=255)
                               aTGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGcc                                                          >  1:2199192/1‑93 (MQ=255)
                               aTGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGcc                                                          >  1:2860860/1‑93 (MQ=255)
                                tGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGccc                                                         >  2:6295465/1‑93 (MQ=255)
                                tGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGccc                                                         >  1:8266368/1‑93 (MQ=255)
                                  tCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAg                                                       >  1:5927310/1‑93 (MQ=255)
                                   cccGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGa                                                      <  2:861137/93‑1 (MQ=255)
                                   cccGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGa                                                      <  1:1394132/93‑1 (MQ=255)
                                    ccGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGAt                                                     <  1:7210330/93‑1 (MQ=255)
                                    ccGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGAt                                                     <  2:8094808/93‑1 (MQ=255)
                                    ccGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGAt                                                     >  1:6208655/1‑93 (MQ=255)
                                     cGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATg                                                    >  2:5078946/1‑93 (MQ=255)
                                      gggCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGt                                                   <  2:7208673/93‑1 (MQ=255)
                                      gggCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGt                                                   >  2:4156566/1‑93 (MQ=255)
                                       ggCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGtt                                                  >  2:3304066/1‑93 (MQ=255)
                                         cAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGtttt                                                >  1:4426439/1‑93 (MQ=255)
                                          aaGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTc                                               >  1:256557/1‑93 (MQ=255)
                                          aaGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTc                                               <  2:7670408/93‑1 (MQ=255)
                                          aaGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTc                                               <  2:243558/93‑1 (MQ=255)
                                          aaGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTc                                               >  2:1351494/1‑93 (MQ=255)
                                          aaGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTc                                               <  2:347571/93‑1 (MQ=255)
                                             ttttGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCg                                            >  1:650028/1‑93 (MQ=255)
                                              tttGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCgg                                           <  2:847355/93‑1 (MQ=255)
                                              tttGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCgg                                           <  1:7839142/93‑1 (MQ=255)
                                                  cccAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGaaa                                       >  2:2302169/1‑93 (MQ=255)
                                                  cccAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGaaa                                       <  1:2765650/93‑1 (MQ=255)
                                                   ccAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAAc                                      >  1:4141194/1‑93 (MQ=255)
                                                   ccAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAAc                                      <  2:2981105/93‑1 (MQ=255)
                                                   ccAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAAc                                      <  2:8156960/93‑1 (MQ=255)
                                                    cAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAACCg                                     >  1:5492266/1‑93 (MQ=255)
                                                     aGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCGCGGGAAACGc                                    >  1:1953117/1‑93 (MQ=255)
                                                        ttttCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTcc                                 >  2:1804411/1‑93 (MQ=255)
                                                         tttCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTccc                                <  2:1430535/93‑1 (MQ=255)
                                                            ccGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgt                             <  1:918060/93‑1 (MQ=255)
                                                             cGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgtt                            <  1:3520251/93‑1 (MQ=255)
                                                             cGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgtt                            <  2:2719652/93‑1 (MQ=255)
                                                              gTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgttg                           <  2:7698378/93‑1 (MQ=255)
                                                              gTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgttg                           <  2:1116713/93‑1 (MQ=255)
                                                              gTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgttg                           <  1:7392583/93‑1 (MQ=255)
                                                               tGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgttgt                          >  1:7257903/1‑93 (MQ=255)
                                                                gATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTtgtg                         <  1:1404508/93‑1 (MQ=255)
                                                                gATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTtgtg                         <  1:5413686/93‑1 (MQ=255)
                                                                  tGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTgtggt                       <  2:3143782/93‑1 (MQ=255)
                                                                    tttCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCAGGAAACGCTCCCTGTTGTGGTGa                     >  2:4766319/1‑93 (MQ=255)
                                                                     ttCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGAt                    <  1:4045317/93‑1 (MQ=255)
                                                                     ttCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGAt                    <  2:3769919/93‑1 (MQ=255)
                                                                      tCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATc                   <  1:3274767/93‑1 (MQ=255)
                                                                       ccGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCg                  >  1:7626333/1‑93 (MQ=255)
                                                                        cGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGc                 <  2:2422896/93‑1 (MQ=255)
                                                                          gAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTg               <  2:7929312/93‑1 (MQ=255)
                                                                           aaCCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGa              <  1:8531465/93‑1 (MQ=255)
                                                                           aaCCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGa              <  2:4924214/93‑1 (MQ=255)
                                                                           aaCCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGa              >  1:4456807/1‑93 (MQ=255)
                                                                            aCCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAg             <  2:7383926/93‑1 (MQ=255)
                                                                              cACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTc           <  2:5696222/93‑1 (MQ=255)
                                                                                cgccgcTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAg         <  1:682899/93‑1 (MQ=255)
                                                                                  ccgcTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTa       <  1:4815161/93‑1 (MQ=255)
                                                                                   cgcTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAg      >  1:793817/1‑93 (MQ=255)
                                                                                     ctggccgTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGc    <  2:6187725/93‑1 (MQ=255)
                                                                                       ggccgTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAAGGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGCTa  >  2:5497227/1‑93 (MQ=255)
                                                                                       ggccgTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGCTa  <  2:3889372/93‑1 (MQ=255)
                                                                                          |                                                                                         
GACCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGCTA  >  NC_000913/320032‑320211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: