BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,621,612	T→C	intergenic (+199/‑397)	yhhH → / → yhhI	hypothetical protein/putative receptor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,621,612	0	T	C	100.0%	1265.0 / NA	376	intergenic (+199/‑397)	yhhH/yhhI	hypothetical protein/putative receptor
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (224/152); total (224/152)

Only 100 of 381 total aligned reads displayed.

AAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAT  >  NC_000913/3621523‑3621701

aaaTACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtga                                                                                        >  2:6204910/1‑93 (MQ=21)

 aaTACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtgat                                                                                       >  1:1688093/1‑93 (MQ=18)

 aaTACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtgat                                                                                       >  1:6630858/1‑93 (MQ=21)

   tacatacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtgatga                                                                                     <  1:8295921/93‑1 (MQ=18)

    acatacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTgatgat                                                                                    >  1:1205584/1‑93 (MQ=21)

      atacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCg                                                                                  >  2:6921296/1‑93 (MQ=21)

       tacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGc                                                                                 <  2:1845498/93‑1 (MQ=255)

       tacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGc                                                                                 >  2:6035149/1‑93 (MQ=37)

       tacCAGAAAAGAAAGGCAAGTAAAGAGGATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGc                                                                                 >  2:8809577/1‑93 (MQ=255)

           agaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAAtt                                                                             <  2:4254100/93‑1 (MQ=37)

           agaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAAtt                                                                             >  1:3271942/1‑93 (MQ=255)

            gaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTc                                                                            >  1:6461177/1‑93 (MQ=37)

            gaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTc                                                                            >  1:2740847/1‑93 (MQ=255)

             aaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTcc                                                                           <  2:6262647/93‑1 (MQ=255)

             aaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTcc                                                                           <  1:2391413/93‑1 (MQ=255)

             aaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTcc                                                                           >  1:1410943/1‑93 (MQ=255)

             aaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTcc                                                                           <  1:8398460/93‑1 (MQ=255)

              aaagaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCt                                                                          <  1:7312576/93‑1 (MQ=255)

              aaagaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCt                                                                          <  2:5596616/93‑1 (MQ=255)

              aaagaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCt                                                                          >  1:3624195/1‑93 (MQ=255)

               aagaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAGGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCtt                                                                         <  1:4841071/93‑1 (MQ=255)

                agaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTg                                                                        >  2:6580189/1‑93 (MQ=255)

                agaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTg                                                                        >  1:496003/1‑93 (MQ=255)

                agaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTg                                                                        >  1:5504180/1‑93 (MQ=255)

                 gaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGa                                                                       >  1:5476323/1‑93 (MQ=37)

                 gaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGa                                                                       >  2:5156606/1‑93 (MQ=255)

                  aaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaa                                                                      >  1:1707352/1‑93 (MQ=255)

                   aagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaaa                                                                     >  1:1126376/1‑93 (MQ=255)

                    agGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaaaa                                                                    <  2:1051717/93‑1 (MQ=255)

                      gCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAgg                                                                  >  1:2953122/1‑93 (MQ=255)

                       cAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGa                                                                 <  2:8667147/93‑1 (MQ=255)

                       cAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGa                                                                 >  2:8443147/1‑93 (MQ=255)

                       cAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGa                                                                 <  1:1832503/93‑1 (MQ=255)

                         aGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGAtt                                                               <  2:1332580/93‑1 (MQ=255)

                           tAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTc                                                             <  2:8229350/93‑1 (MQ=255)

                             aaGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAt                                                           <  2:4387074/93‑1 (MQ=255)

                             aaGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAt                                                           >  1:703767/1‑93 (MQ=255)

                              agagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATc                                                          <  2:8082642/93‑1 (MQ=37)

                               gagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCt                                                         >  2:1064895/1‑93 (MQ=37)

                               gagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCt                                                         >  2:551734/1‑93 (MQ=255)

                               gagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCt                                                         >  2:4606106/1‑93 (MQ=255)

                               gagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCt                                                         >  1:8145230/1‑93 (MQ=37)

                                agTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTg                                                        >  2:5851037/1‑93 (MQ=255)

                                 gTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGc                                                       >  2:7080855/1‑93 (MQ=255)

                                   aTGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCa                                                     <  2:1965893/93‑1 (MQ=255)

                                   aTGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCa                                                     <  2:307405/93‑1 (MQ=255)

                                    tGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCag                                                    >  2:6325711/1‑93 (MQ=255)

                                      gTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCagag                                                  >  1:3047199/1‑93 (MQ=255)

                                          atataATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTAtt                                              >  2:7383258/1‑93 (MQ=255)

                                          atataATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTAtt                                              <  2:5062045/93‑1 (MQ=37)

                                           tataATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTa                                             >  1:3497265/1‑93 (MQ=37)

                                             taataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACa                                           <  1:5973632/93‑1 (MQ=255)

                                             taataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACa                                           <  2:4065173/93‑1 (MQ=255)

                                             taataaATGTAAGAAACTAAAGGATGATGAATTATTTCGCTTACCTGATGGTCGTGATTCCTTGAATAGGATTTCATCTGCCAGAGTATTACa                                           >  1:4590916/1‑93 (MQ=11)

                                               ataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGt                                         >  2:4682491/1‑93 (MQ=37)

                                               ataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGt                                         <  2:7642358/93‑1 (MQ=255)

                                               ataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGt                                         <  2:2064458/93‑1 (MQ=255)

                                                taaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAACAGGATTTCATCTGCCAGAGTATTACAGta                                        >  1:7887957/1‑92 (MQ=255)

                                                taaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGtt                                        <  1:6732907/93‑1 (MQ=25)

                                                 aaaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTa                                       >  2:2907173/1‑93 (MQ=21)

                                                  aaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTaa                                      >  1:2179687/1‑93 (MQ=18)

                                                  aaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTaa                                      >  2:3494267/1‑93 (MQ=21)

                                                  aaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTaa                                      >  2:6166696/1‑93 (MQ=21)

                                                  aaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTaa                                      >  1:2426383/1‑93 (MQ=21)

                                                    tGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAaga                                    <  1:2692438/93‑1 (MQ=21)

                                                    tGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAaga                                    >  1:5669183/1‑93 (MQ=18)

                                                    tGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAaga                                    <  1:3434786/93‑1 (MQ=21)

                                                     gTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAagag                                   >  1:5313711/1‑93 (MQ=21)

                                                       aaGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggg                                 >  1:1311817/1‑93 (MQ=25)

                                                       aaGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggg                                 <  1:8059918/93‑1 (MQ=25)

                                                       aaGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggg                                 <  1:3861312/93‑1 (MQ=25)

                                                        aGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggg                                >  1:4035609/1‑93 (MQ=25)

                                                        aGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggg                                >  1:4775424/1‑93 (MQ=255)

                                                         gAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggggg                               <  2:4812916/93‑1 (MQ=255)

                                                         gAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggggg                               >  2:7932997/1‑93 (MQ=255)

                                                          aaaCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggggg                              <  2:1567409/93‑1 (MQ=37)

                                                           aaCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGc                             >  1:8612723/1‑93 (MQ=37)

                                                               aaaTGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGa                         >  2:327864/1‑93 (MQ=255)

                                                               aaaTGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGa                         >  1:206175/1‑93 (MQ=37)

                                                                aaTGATGATGAATTATTTCGCTTACCTGATGATCGCATTTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGAc                        >  1:5815366/1‑93 (MQ=255)

                                                                aaTGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCATTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGAc                        >  2:3903228/1‑93 (MQ=255)

                                                                  tgatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGc                      <  2:3725132/93‑1 (MQ=37)

                                                                   gatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCt                     <  1:5178981/93‑1 (MQ=255)

                                                                   gatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCt                     >  2:4997830/1‑93 (MQ=255)

                                                                   gatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCt                     >  1:6365474/1‑93 (MQ=255)

                                                                    atgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTg                    >  2:1686976/1‑93 (MQ=255)

                                                                    atgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTg                    >  1:5069698/1‑93 (MQ=37)

                                                                     tgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGt                   >  1:606982/1‑93 (MQ=255)

                                                                      gatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGtt                  >  2:2454456/1‑93 (MQ=255)

                                                                         gaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGa               >  2:357738/1‑93 (MQ=255)

                                                                          aaTTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAt              <  1:1000332/93‑1 (MQ=255)

                                                                          aaTTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAt              >  2:7681188/1‑93 (MQ=255)

                                                                              attTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCGAGACGCTGTTAGATTGGc          >  2:781347/1‑93 (MQ=255)

                                                                              attTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGc          >  1:6243657/1‑93 (MQ=255)

                                                                              attTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGc          >  1:883202/1‑93 (MQ=255)

                                                                                 tCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAt       <  1:6885120/93‑1 (MQ=37)

                                                                                  cGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAtt      <  2:2271270/93‑1 (MQ=255)

                                                                                     ttACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGaa   >  2:7427245/1‑93 (MQ=255)

                                                                                     ttACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGaa   >  1:5427288/1‑93 (MQ=255)

                                                                                      tACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAt  <  1:4255446/93‑1 (MQ=255)

AAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAT  >  NC_000913/3621523‑3621701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`