BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,654,259	T→C	T38A (ACC→GCC)	hdeA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,654,259	0	T	C	99.7%	1327.8 / ‑6.0	388	T38A (ACC→GCC)	hdeA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (190/196); total (191/197)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 399 total aligned reads displayed.

CTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAA  >  NC_000913/3654169‑3654348

cttctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGccc                                                                                         >  2:6900947/1‑93 (MQ=255)

cttctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGccc                                                                                         >  2:716774/1‑93 (MQ=255)

cttctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGccc                                                                                         <  2:3391531/93‑1 (MQ=255)

  tctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAg                                                                                       <  2:648673/93‑1 (MQ=255)

  tctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAg                                                                                       >  2:6763661/1‑93 (MQ=255)

  tctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAg                                                                                       >  2:2201649/1‑93 (MQ=255)

   ttGGTTGATCTTTTTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAgg                                                                                      <  1:4208561/92‑1 (MQ=255)

   ctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAgg                                                                                      >  1:3693446/1‑93 (MQ=255)

    tGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGa                                                                                     <  2:4934864/93‑1 (MQ=255)

    tGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGa                                                                                     <  1:5614168/93‑1 (MQ=255)

     ggTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAg                                                                                    <  1:7012362/93‑1 (MQ=255)

      gTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGt                                                                                   >  2:7500648/1‑93 (MQ=255)

       tttATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGtt                                                                                  <  2:3689312/93‑1 (MQ=255)

         tATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGa                                                                                >  2:3930982/1‑93 (MQ=255)

           tCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGAcc                                                                              >  1:6134193/1‑93 (MQ=255)

            cTTTGTTCTCCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCg                                                                             <  1:4414862/93‑1 (MQ=255)

             tttGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCgg                                                                            >  1:2676377/1‑93 (MQ=255)

              ttgttgTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGt                                                                           >  2:5502565/1‑93 (MQ=255)

               tgttgtTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGtt                                                                          <  1:4317672/93‑1 (MQ=255)

                gttgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttt                                                                         >  2:2074255/1‑93 (MQ=255)

                gttgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttt                                                                         <  1:6199588/93‑1 (MQ=255)

                   gttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGtttttt                                                                      >  2:1820817/1‑93 (MQ=255)

                   gttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGtttttt                                                                      <  1:1488825/93‑1 (MQ=255)

                   gttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGgttttt                                                                      >  1:289153/1‑93 (MQ=255)

                      cAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGtt                                                                   >  1:2753831/1‑93 (MQ=255)

                      cAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGtt                                                                   >  2:7638215/1‑93 (MQ=255)

                         cgcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATc                                                                <  1:3975254/93‑1 (MQ=255)

                         cgcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATc                                                                <  1:8342440/93‑1 (MQ=255)

                          gcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCa                                                               >  2:1364084/1‑93 (MQ=255)

                          gcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGGCCACAGCCAGGAAATCTTCAAAGGCCCAGGAGTTGACCGGTTTTTTGTTATCa                                                               <  1:5386607/93‑1 (MQ=255)

                           cTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAg                                                              >  1:6389621/1‑93 (MQ=255)

                           cTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAg                                                              <  2:901768/93‑1 (MQ=255)

                           cTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAg                                                              >  2:6085671/1‑93 (MQ=255)

                           cTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAg                                                              <  1:4845368/93‑1 (MQ=255)

                            ttCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgc                                                             <  2:2123236/93‑1 (MQ=255)

                            ttCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgc                                                             >  2:8731308/1‑93 (MQ=255)

                            ttCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgc                                                             >  1:822032/1‑93 (MQ=255)

                             tCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgct                                                            <  1:1825624/93‑1 (MQ=255)

                                tcAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCACAGGAGTTGACCGGTTTTTTGTTATCAgatgct                                                         <  1:725344/92‑1 (MQ=255)

                                gCAAAACCAACTGCTGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgctgct                                                         <  1:7501295/93‑1 (MQ=255)

                                gCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgctgct                                                         >  1:7776157/1‑93 (MQ=255)

                                  aaaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCttt                                                       >  2:6644816/1‑93 (MQ=255)

                                   aaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCa                                                                                        <  2:6177767/59‑1 (MQ=255)

                                   aaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCa                                                                                        >  1:4550605/1‑59 (MQ=255)

                                   aaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCtttt                                                      >  1:6548097/1‑93 (MQ=255)

                                    aaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCttttt                                                     >  2:1080461/1‑93 (MQ=255)

                                    aaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCttttt                                                     >  1:6665202/1‑93 (MQ=255)

                                     aCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTg                                                    <  2:4266228/93‑1 (MQ=255)

                                      ccAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTgc                                                   >  1:1245646/1‑93 (MQ=255)

                                      ccAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTgc                                                   >  1:3179269/1‑93 (MQ=255)

                                           tGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATc                                              >  2:4733497/1‑93 (MQ=255)

                                            gCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATcc                                             <  2:8351960/93‑1 (MQ=255)

                                               gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt                                          >  1:7943438/1‑93 (MQ=255)

                                               gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt                                          >  2:5005702/1‑93 (MQ=255)

                                               gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGATGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt                                          >  2:785269/1‑93 (MQ=255)

                                                ttGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTg                                         <  1:51428/93‑1 (MQ=255)

                                                  ggCTGGAAGGATTCGTCCACAGCCAGTAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCa                                       <  2:2745524/93‑1 (MQ=255)

                                                    cTGGAAGGATTTGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCAtt                                     >  1:1396544/1‑93 (MQ=255)

                                                    cTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCAtt                                     <  1:1671644/93‑1 (MQ=255)

                                                     tGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTg                                    >  1:7179846/1‑93 (MQ=255)

                                                      ggAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGc                                   >  2:4441678/1‑93 (MQ=255)

                                                      ggAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGc                                   >  2:5756009/1‑93 (MQ=255)

                                                       gAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCt                                  <  2:158074/93‑1 (MQ=255)

                                                        aaGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTc                                 <  2:5309825/93‑1 (MQ=255)

                                                         aGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTca                                >  1:6853543/1‑93 (MQ=255)

                                                         aGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTca                                >  1:5794337/1‑93 (MQ=255)

                                                         aGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTca                                >  2:7270588/1‑93 (MQ=255)

                                                          ggATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTcac                               >  2:2529631/1‑93 (MQ=255)

                                                           gATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGGTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTcaca                              >  2:3072279/1‑93 (MQ=255)

                                                             ttCGTCCACAGCCAGGAAATCTTCACAGGCCCATGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAAc                            >  1:3232761/1‑93 (MQ=255)

                                                                gTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTgg                         >  1:495663/1‑93 (MQ=255)

                                                                 tCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGc                        >  1:1104596/1‑93 (MQ=255)

                                                                 tCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGc                        <  2:5600420/93‑1 (MQ=255)

                                                                  ccACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCa                       <  1:3867738/93‑1 (MQ=255)

                                                                  ccACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCa                       >  1:2599153/1‑93 (MQ=255)

                                                                   cacaGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCag                      <  1:7323812/93‑1 (MQ=255)

                                                                      aGCCAGGAAATCTTCACAGGCCCAGTAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaag                   <  2:4076022/93‑1 (MQ=255)

                                                                       gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                  >  2:344589/1‑93 (MQ=255)

                                                                       gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                  <  2:2657297/93‑1 (MQ=255)

                                                                       gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                  <  2:5817997/93‑1 (MQ=255)

                                                                       gCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaaga                  >  2:8495210/1‑93 (MQ=255)

                                                                         cAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGaagaag                <  2:419877/93‑1 (MQ=255)

                                                                         cAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGaagaag                <  1:8805919/93‑1 (MQ=255)

                                                                         cAGGAAATCCTCACAGGCCCAGGGGTTGACCGGTTTTTTGGTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCCCACAACCGGCAGaagaag                <  2:4330504/93‑1 (MQ=255)

                                                                          aGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGc               <  2:4602433/93‑1 (MQ=255)

                                                                          aGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGc               >  2:1937834/1‑93 (MQ=255)

                                                                           ggAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCa              >  1:3519550/1‑93 (MQ=255)

                                                                           ggAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCa              >  2:8042842/1‑93 (MQ=255)

                                                                           ggAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCa              <  2:823270/93‑1 (MQ=255)

                                                                           ggAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCa              >  1:8716715/1‑93 (MQ=255)

                                                                           ggAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCa              >  1:8651609/1‑93 (MQ=255)

                                                                            gAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAg             <  1:2029861/93‑1 (MQ=255)

                                                                             aaaTCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGa            <  1:6032937/93‑1 (MQ=255)

                                                                              aaTCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGac           <  2:126839/93‑1 (MQ=255)

                                                                                tCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGAAGacca         >  1:5468098/1‑93 (MQ=255)

                                                                                 cTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGaccac        <  1:761103/93‑1 (MQ=255)

                                                                                      caGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGa   <  2:7004847/93‑1 (MQ=255)

                                                                                       aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa  <  1:5009675/93‑1 (MQ=255)

                                                                                       aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa  <  1:8097985/93‑1 (MQ=255)

                                                                                       aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa  <  2:2363708/93‑1 (MQ=255)

CTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAA  >  NC_000913/3654169‑3654348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`