Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,816,074 A→G T234A (ACC→GCC)  dinD → DNA‑damage‑inducible protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,816,0740AG98.9% 1200.9 / ‑0.9 357T234A (ACC→GCC) dinDDNA‑damage‑inducible protein
Reads supporting (aligned to +/- strand):  ref base A (4/0);  new base G (199/154);  total (203/154)
Fisher's exact test for biased strand distribution p-value = 1.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.57e-01

Only 100 of 376 total aligned reads displayed.

TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTC  >  NC_000913/3815984‑3816163
                                                                                          |                                                                                         
tCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAAcgcc                                                                                         <  2:8299501/93‑1 (MQ=255)
 cAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAATAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAAcgcca                                                                                        <  2:8426802/93‑1 (MQ=255)
  aaCAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAAcgccac                                                                                       >  2:1081286/1‑93 (MQ=255)
   aCAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcaca                                                                                      >  1:3439841/1‑93 (MQ=255)
    cAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacac                                                                                     >  2:4591202/1‑93 (MQ=255)
     aGAACTGGCGGCTAATCTCTTTCGAGCTACTCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacaca                                                                                    >  1:6681470/1‑93 (MQ=255)
     aGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacaca                                                                                    >  1:8557680/1‑93 (MQ=255)
     aGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacaca                                                                                    <  1:6270959/93‑1 (MQ=255)
      gAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCacacac                                                                                   >  1:7052299/1‑93 (MQ=255)
      gAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCacacac                                                                                   >  1:2641448/1‑93 (MQ=255)
         cTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACttt                                                                                <  1:4647923/93‑1 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               >  1:1357723/1‑93 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               <  2:7140403/93‑1 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               >  1:3749883/1‑93 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               >  1:3317920/1‑93 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               >  2:4842018/1‑93 (MQ=255)
           ggcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGa                                                                              >  2:3989231/1‑93 (MQ=255)
           ggcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGa                                                                              <  2:2058687/93‑1 (MQ=255)
           ggcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGa                                                                              <  2:6360574/93‑1 (MQ=255)
            gcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGAc                                                                             <  2:8628693/93‑1 (MQ=255)
            gcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGAc                                                                             >  1:6937976/1‑93 (MQ=255)
             cggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACg                                                                            >  2:2020243/1‑93 (MQ=255)
              ggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGt                                                                           <  1:5232958/93‑1 (MQ=255)
              ggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGt                                                                           >  1:1605839/1‑93 (MQ=255)
              ggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGt                                                                           <  2:1776680/93‑1 (MQ=255)
              ggcTAATCTATTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGt                                                                           >  2:5423788/1‑93 (MQ=255)
               gcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTg                                                                          >  1:3977513/1‑93 (MQ=255)
               gcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTg                                                                          >  1:2859068/1‑93 (MQ=255)
                cTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTgg                                                                         >  2:2719135/1‑93 (MQ=255)
                 tAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTggg                                                                        >  1:4551638/1‑93 (MQ=255)
                  aaTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTgggc                                                                       >  2:5646709/1‑92 (MQ=255)
                  aaTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGt                                                                       >  2:7366504/1‑93 (MQ=255)
                  aaTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGt                                                                       >  1:2405973/1‑93 (MQ=255)
                      tctTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCa                                                                   >  2:1550384/1‑93 (MQ=255)
                        tttCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAg                                                                 >  2:6212619/1‑93 (MQ=255)
                        tttCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAg                                                                 >  1:7486954/1‑93 (MQ=255)
                            gAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGa                                                             >  1:4193504/1‑93 (MQ=255)
                            gAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGa                                                             <  1:810612/93‑1 (MQ=255)
                             aGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAg                                                            <  1:7210755/93‑1 (MQ=255)
                             aGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAg                                                            <  2:3640495/93‑1 (MQ=255)
                              gCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAgg                                                           >  1:5076113/1‑93 (MQ=255)
                              gCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAgg                                                           >  2:2214292/1‑93 (MQ=255)
                               cTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGc                                                          >  1:3112029/1‑93 (MQ=255)
                                  cccAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCaaa                                                       >  1:7292555/1‑93 (MQ=255)
                                   ccAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAAc                                                      >  1:6961768/1‑93 (MQ=255)
                                     aaaCAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCa                                                    >  2:6951170/1‑93 (MQ=255)
                                        cAGAAGAAAAACTCAAGCGGGATGGCGTGATTTCAAAACAGCAAGCAAACGCCACACACTTTGTCGTGGGATGCTTTGTGAGGCAAACCATTc                                                 >  2:8096311/1‑93 (MQ=255)
                                         agaagaAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCa                                                >  1:2323086/1‑93 (MQ=255)
                                         agaagaAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCa                                                >  1:2767606/1‑93 (MQ=255)
                                         agaagaAAAACTCAAGCGGGATGGCATGAATTCAAAACAGCAAGAAAACGCCACACACTTTGACGTGGGACGCAAGGTGAGGCAAACCATTCa                                                >  1:5823815/1‑93 (MQ=255)
                                             gaaAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGaa                                            >  2:437985/1‑93 (MQ=255)
                                              aaaaaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGGGAGGCAAACCATTCAGGaat                                           >  1:7598870/1‑92 (MQ=255)
                                               aaaaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACt                                          >  2:825601/1‑93 (MQ=255)
                                               aaaaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACt                                          >  1:1945018/1‑93 (MQ=255)
                                                  aCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTgg                                       >  1:847129/1‑93 (MQ=255)
                                                  aCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTgg                                       >  1:1746800/1‑93 (MQ=255)
                                                    tCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCg                                     >  1:8356248/1‑93 (MQ=255)
                                                    tCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCg                                     <  2:2657416/93‑1 (MQ=255)
                                                     cAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGATGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCgg                                    <  1:6538563/93‑1 (MQ=255)
                                                     cAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCgg                                    <  1:1058065/93‑1 (MQ=255)
                                                      aaGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGa                                   >  2:7685690/1‑93 (MQ=255)
                                                       aGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGaa                                  >  2:4215634/1‑93 (MQ=255)
                                                        gCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAAc                                 <  2:5871875/93‑1 (MQ=255)
                                                          gggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCa                               <  1:7373639/93‑1 (MQ=255)
                                                          gggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCa                               >  2:1397158/1‑93 (MQ=255)
                                                           ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt                              <  1:1122425/93‑1 (MQ=255)
                                                           ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt                              <  2:506932/93‑1 (MQ=255)
                                                           ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt                              <  1:7778263/93‑1 (MQ=255)
                                                           ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt                              >  1:783441/1‑93 (MQ=255)
                                                            gATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATg                             <  2:3273321/93‑1 (MQ=255)
                                                             aTGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGc                            >  2:230457/1‑93 (MQ=255)
                                                                gCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGTCTg                         >  1:5402909/1‑93 (MQ=255)
                                                                gCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTg                         >  2:6597804/1‑93 (MQ=255)
                                                                 cGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTga                        <  1:4981996/93‑1 (MQ=255)
                                                                 cGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTga                        >  2:4180288/1‑93 (MQ=255)
                                                                  gTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgag                       >  1:4299305/1‑93 (MQ=255)
                                                                  gTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgag                       <  2:8584140/93‑1 (MQ=255)
                                                                  gTGAATTCAAAACAGCAAACAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgag                       >  2:7493538/1‑93 (MQ=255)
                                                                    gAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgagga                     >  1:483991/1‑93 (MQ=255)
                                                                    gAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgagga                     >  2:5771306/1‑93 (MQ=255)
                                                                     aaTTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgaggag                    >  1:4417840/1‑93 (MQ=255)
                                                                     aaTTCAAAACAGCAAGCAAACACAACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgaggag                    >  1:5408309/1‑93 (MQ=255)
                                                                       ttCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGtt                  >  2:3855665/1‑93 (MQ=255)
                                                                        tCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTg                 >  1:6172421/1‑93 (MQ=255)
                                                                        tCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTg                 <  2:3415657/93‑1 (MQ=255)
                                                                          aaaaCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGCTGcc               >  2:597425/1‑93 (MQ=255)
                                                                             aCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAc            <  1:8296819/93‑1 (MQ=255)
                                                                              cAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcc           >  1:2263081/1‑93 (MQ=255)
                                                                               agcaagcaAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAccc          <  1:8792/93‑1 (MQ=255)
                                                                               agcaagcaAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAccc          <  1:3259939/93‑1 (MQ=255)
                                                                                gcaagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcccc         >  2:289558/1‑93 (MQ=255)
                                                                                gcaagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcccc         <  2:1837448/93‑1 (MQ=255)
                                                                                gcaagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcccc         >  2:6087412/1‑93 (MQ=255)
                                                                                  aagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGc       >  2:7852268/1‑93 (MQ=255)
                                                                                   agcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCa      <  1:2078549/93‑1 (MQ=255)
                                                                                    gcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAg     >  2:7034883/1‑93 (MQ=255)
                                                                                    gcaaACGCCACACACTGTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAg     <  2:5256447/93‑1 (MQ=255)
                                                                                     caaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGGCCCCGCAgg    <  1:5711778/93‑1 (MQ=255)
                                                                                     caaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAgg    <  1:2530653/93‑1 (MQ=255)
                                                                                       aaCGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTc  <  2:7589689/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTC  >  NC_000913/3815984‑3816163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: