Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 400,205 A→G intergenic (‑58/‑405) ddlA ← / → yaiB D‑alanine‑D‑alanine ligase A/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913400,2050AG99.5% 656.7 / NA 196intergenic (‑58/‑405)ddlA/yaiBD‑alanine‑D‑alanine ligase A/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (46/149);  minor base C (0/1);  total (46/150)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 210 total aligned reads displayed.

ACCAAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGATTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGC  >  NC_000913/400115‑400294
                                                                                          |                                                                                         
cccaAAAACGATTCCTTCCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCGAGCACAAAGTGCATACATTGCCACGACAAAACGGGGGGtt                                                                                         <  2:2674993/92‑1 (MQ=255)
accaAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGtt                                                                                         <  2:4599961/93‑1 (MQ=255)
accaAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGtt                                                                                         <  2:5141575/93‑1 (MQ=255)
 ccaAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTc                                                                                        <  1:7292147/93‑1 (MQ=255)
   aaaaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTcgc                                                                                      <  1:923726/93‑1 (MQ=255)
   aaaaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTcgc                                                                                      <  2:241797/93‑1 (MQ=255)
     aaaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCgg                                                                                    >  1:53520/1‑93 (MQ=255)
      aaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGc                                                                                   >  1:6164487/1‑93 (MQ=255)
      aaCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGc                                                                                   <  1:2386593/93‑1 (MQ=255)
       aCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGcc                                                                                  <  2:6328614/93‑1 (MQ=255)
       aCGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGcc                                                                                  >  2:5696833/1‑93 (MQ=255)
        cGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCt                                                                                 <  2:8261143/93‑1 (MQ=255)
        cGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCt                                                                                 <  1:6170282/93‑1 (MQ=255)
        cGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCt                                                                                 <  1:4370590/93‑1 (MQ=255)
         gATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCtt                                                                                <  2:4786761/93‑1 (MQ=255)
         gATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCtt                                                                                <  1:7741801/93‑1 (MQ=255)
          aTTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAACACGGGGGGTTCGCGGCCTTc                                                                               >  2:7136323/1‑93 (MQ=255)
          aTTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTc                                                                               <  2:5469924/93‑1 (MQ=255)
          aTTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTc                                                                               <  1:6462487/93‑1 (MQ=255)
           ttCCTACCCGCAGTTTTTCCATCTTAAAACCCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCt                                                                              <  1:8698647/93‑1 (MQ=255)
           ttCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCt                                                                              <  1:8698645/93‑1 (MQ=255)
           ttCCTACCCGCAGTTTTTCCAACTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCt                                                                              <  1:7437144/93‑1 (MQ=255)
            tCCTACCCGCAGTTTTTCCATCTTAAAACCCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTg                                                                             <  1:1885986/93‑1 (MQ=255)
            tCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTg                                                                             <  2:8621192/93‑1 (MQ=255)
               tACCCGCAGTGTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGaaa                                                                          <  1:5933912/93‑1 (MQ=255)
                 cccGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGa                                                                        >  1:5510208/1‑93 (MQ=255)
                  ccGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGAt                                                                       <  2:5009553/93‑1 (MQ=255)
                  ccGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGAt                                                                       <  2:8155534/93‑1 (MQ=255)
                     cAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGAttgt                                                                    <  2:7341168/93‑1 (MQ=255)
                      aGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGAttgtt                                                                   <  1:7894208/93‑1 (MQ=255)
                      aGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGAttgtt                                                                   <  2:3597461/93‑1 (MQ=255)
                       gTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGAttgttg                                                                  >  1:2351091/1‑93 (MQ=255)
                          tttCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCat                                                               >  1:1098601/1‑92 (MQ=255)
                          tttCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCaa                                                               <  2:7176813/93‑1 (MQ=255)
                          tttCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCaa                                                               <  2:8545073/93‑1 (MQ=255)
                           ttCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAt                                                              <  1:1313505/93‑1 (MQ=255)
                            tCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtc                                                             >  2:2958205/1‑93 (MQ=255)
                            tCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtc                                                             <  1:3901230/93‑1 (MQ=255)
                              cATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtctt                                                           <  2:5052553/93‑1 (MQ=255)
                               aTCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtcttc                                                          >  2:4706218/1‑93 (MQ=255)
                               aTCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtcttc                                                          <  1:2280012/93‑1 (MQ=255)
                                tCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtcttct                                                         <  1:5088274/93‑1 (MQ=255)
                                tCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAAtcttct                                                         <  2:528788/93‑1 (MQ=255)
                                   tAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTctgct                                                      <  1:3175830/93‑1 (MQ=255)
                                   tAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTctgct                                                      <  1:1781558/93‑1 (MQ=255)
                                     aaaaCCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTctgctgc                                                    >  1:5820608/1‑92 (MQ=255)
                                      aaaCCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGAc                                                   <  1:4576589/93‑1 (MQ=255)
                                      aaaCCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGAc                                                   >  1:5905815/1‑93 (MQ=255)
                                        aCCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACaa                                                 <  1:1705834/93‑1 (MQ=255)
                                        aCCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACaa                                                 >  1:2908819/1‑93 (MQ=255)
                                         ccTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACaaa                                                <  1:3226884/93‑1 (MQ=255)
                                         ccTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACaaa                                                >  1:2161042/1‑93 (MQ=255)
                                          cTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAg                                               <  1:4975808/93‑1 (MQ=255)
                                             tCCCGTCTAACACAAAGTGCATACATTGCCACGACAAAGCGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCCTCTGCTGACAAAGCGt                                            <  2:5795671/93‑1 (MQ=255)
                                             tCCCGTCTAACACAAAGTGCATACATGACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGt                                            <  1:7934227/93‑1 (MQ=255)
                                               ccGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTga                                          >  2:7584925/1‑92 (MQ=255)
                                               ccGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGc                                          <  2:6497450/93‑1 (MQ=255)
                                               ccGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGc                                          <  2:1539014/93‑1 (MQ=255)
                                                cGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCa                                         >  1:7068534/1‑93 (MQ=255)
                                                 gTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCaa                                        <  1:6944358/93‑1 (MQ=255)
                                                  tCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAAc                                       <  1:1409277/93‑1 (MQ=255)
                                                  tCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAAc                                       <  2:6195010/93‑1 (MQ=255)
                                                  tCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAAc                                       <  2:3300989/93‑1 (MQ=255)
                                                  tCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAAc                                       >  1:1352996/1‑93 (MQ=255)
                                                   cTAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACg                                      <  1:3618919/93‑1 (MQ=255)
                                                    tAACACAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGt                                     <  2:5189192/93‑1 (MQ=255)
                                                      acacAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTAc                                   <  2:8484902/93‑1 (MQ=255)
                                                      acacAAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTAc                                   >  2:7459960/1‑93 (MQ=255)
                                                       cacaAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACt                                  <  1:5298406/93‑1 (MQ=255)
                                                       cacaAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACt                                  <  1:3461033/93‑1 (MQ=255)
                                                       cacaAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACt                                  <  2:4092046/93‑1 (MQ=255)
                                                       cacaAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACt                                  <  2:6546075/93‑1 (MQ=255)
                                                        acaAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTg                                 <  1:2682280/93‑1 (MQ=255)
                                                         caAAGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTgg                                <  1:1942161/93‑1 (MQ=255)
                                                            aGTGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTga                             <  1:8204727/93‑1 (MQ=255)
                                                              tGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTgaag                           <  2:1677569/93‑1 (MQ=255)
                                                              tGCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTgaag                           <  1:4411686/93‑1 (MQ=255)
                                                               gCATACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTgaaga                          <  1:2045083/93‑1 (MQ=255)
                                                                cATACATTACCACGACAAAACGGGGGGTTAGCGGCATTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGAACTGGTcaagaa                         >  2:2385771/1‑93 (MQ=255)
                                                                  tACATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAg                       >  1:4189235/1‑93 (MQ=255)
                                                                   aCATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGt                      <  2:3098644/93‑1 (MQ=255)
                                                                   aCATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGt                      <  2:4333230/93‑1 (MQ=255)
                                                                    cATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTg                     <  1:343890/93‑1 (MQ=255)
                                                                    cATTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTg                     <  1:627178/93‑1 (MQ=255)
                                                                     aTTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGc                    <  2:136951/93‑1 (MQ=255)
                                                                     aTTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGc                    <  2:8377785/93‑1 (MQ=255)
                                                                     aTTACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGc                    <  2:2013310/93‑1 (MQ=255)
                                                                       tACCACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGt                  <  1:2147674/93‑1 (MQ=255)
                                                                         ccACGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTCGCAATCTTCTGCTGACAAACCGTGCAACGTACTGGTGAAGAAAGTGCGTTa                <  1:7384340/93‑1 (MQ=255)
                                                                          cACGACAAAACGGGGGGTTAGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAt               <  2:5843997/93‑1 (MQ=255)
                                                                           aCGACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAtc              >  1:3736425/1‑93 (MQ=255)
                                                                             gACAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTAtctc            <  2:7052133/93‑1 (MQ=255)
                                                                               cAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCaa          <  1:7244532/93‑1 (MQ=255)
                                                                               cAAAACGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCaa          <  2:3700741/93‑1 (MQ=255)
                                                                                aaaaCGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCaaa         <  1:8336637/93‑1 (MQ=255)
                                                                                  aaCGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGa       <  1:7731061/93‑1 (MQ=255)
                                                                                  aaCGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGa       <  1:1576046/93‑1 (MQ=255)
                                                                                  aaCGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGa       <  2:6728763/93‑1 (MQ=255)
                                                                                   aCGGGGGGTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGAt      >  1:301246/1‑93 (MQ=255)
                                                                                     ggggggTTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGAtgt    <  2:7925268/93‑1 (MQ=255)
                                                                                          |                                                                                         
ACCAAAAACGATTCCTACCCGCAGTTTTTCCATCTTAAAAACCTATCCCGTCTAACACAAAGTGCATACATTACCACGACAAAACGGGGGATTCGCGGCCTTCTGAAAGATTGTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGC  >  NC_000913/400115‑400294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: