Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,923,014 A→G I83T (ATA→ACA)  gidA ← glucose‑inhibited division

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,923,0140AG99.3% 1009.2 / ‑5.1 290I83T (ATA→ACA) gidAglucose‑inhibited division
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (133/155);  total (134/156)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 302 total aligned reads displayed.

TCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATA  >  NC_000913/3922924‑3923103
                                                                                          |                                                                                         
tcCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTc                                                                                         <  1:6390629/93‑1 (MQ=255)
 ccAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTcc                                                                                        >  1:4444922/1‑93 (MQ=255)
  cAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCt                                                                                       >  2:7950768/1‑93 (MQ=255)
  cAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCt                                                                                       >  2:104583/1‑93 (MQ=255)
    gcgcCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTaa                                                                                     <  2:59372/93‑1 (MQ=255)
      gcCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAAc                                                                                   <  2:7421941/93‑1 (MQ=255)
      gcCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAAc                                                                                   <  2:2787579/93‑1 (MQ=255)
        cgtacgtaCCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTg                                                                                 <  2:3996587/93‑1 (MQ=255)
        cgtacgtaCCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCGTGCGTTTAGTGTCCGAAACTg                                                                                 <  1:3061958/93‑1 (MQ=255)
         gtacgtacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTgg                                                                                >  2:1784753/1‑93 (MQ=255)
              tacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAcc                                                                           <  1:162382/93‑1 (MQ=255)
              tacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAcc                                                                           >  1:5447991/1‑93 (MQ=255)
              tacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAcc                                                                           <  1:3124860/93‑1 (MQ=255)
              tacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAcc                                                                           <  1:4526562/93‑1 (MQ=255)
              tacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTACTTTGCTTGCGTTTAGTGTCCTAAACTGGATAcc                                                                           >  2:3015471/1‑93 (MQ=255)
               tccGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAccc                                                                          <  1:7177333/92‑1 (MQ=255)
               acCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAccc                                                                          <  2:3253340/93‑1 (MQ=255)
               acCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAccc                                                                          >  2:1372975/1‑93 (MQ=255)
                cccccTGCCGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCg                                                                         <  2:2217835/90‑1 (MQ=255)
                   ccTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCt                                                                      >  1:5755262/1‑93 (MQ=255)
                   ccTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCt                                                                      <  2:8145046/93‑1 (MQ=255)
                    cTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTg                                                                     >  1:1100252/1‑93 (MQ=255)
                    cTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTg                                                                     <  2:6632238/93‑1 (MQ=255)
                     tGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTga                                                                    >  1:1134037/1‑93 (MQ=255)
                      gACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTgat                                                                   <  1:1044589/93‑1 (MQ=255)
                      gACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTgat                                                                   >  2:4567492/1‑93 (MQ=255)
                      gACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTgat                                                                   <  2:7778106/93‑1 (MQ=255)
                         ggTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTgatcga                                                                <  2:2175723/93‑1 (MQ=255)
                          ggagagCACCCGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTgatcgat                                                               <  2:3528515/91‑1 (MQ=255)
                           tAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTgatcgatc                                                              <  2:4834420/93‑1 (MQ=255)
                           tAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTgatcgatc                                                              <  1:4763754/93‑1 (MQ=255)
                             gagCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGc                                                            >  2:2954731/1‑93 (MQ=255)
                              agCCCACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCt                                                           <  2:6603811/93‑1 (MQ=255)
                              agCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCt                                                           <  1:7962744/93‑1 (MQ=255)
                                 acacGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTc                                                        >  1:6123228/1‑93 (MQ=255)
                                 acacGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTc                                                        <  2:3429395/93‑1 (MQ=255)
                                 acacGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTc                                                        >  1:7403245/1‑93 (MQ=255)
                                  cacGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCg                                                       >  2:6051695/1‑93 (MQ=255)
                                     gATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCa                                                    <  1:1993460/93‑1 (MQ=255)
                                     caTCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATCCCCGCCTGATCGATCGCTTTCGCCa                                                    <  1:6742553/92‑1 (MQ=255)
                                      aTCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCac                                                   >  1:6242970/1‑92 (MQ=255)
                                      aTCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCAt                                                   <  2:5134636/93‑1 (MQ=255)
                                      aTCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCAt                                                   <  2:7986189/93‑1 (MQ=255)
                                       tCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATc                                                  <  2:206825/93‑1 (MQ=255)
                                        ccGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCa                                                 <  2:5176759/93‑1 (MQ=255)
                                         cGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAg                                                <  1:2058612/93‑1 (MQ=255)
                                           ccTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAc                                              >  1:4034739/1‑93 (MQ=255)
                                           ccTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAc                                              >  2:1707444/1‑93 (MQ=255)
                                           ccTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAc                                              <  1:950923/93‑1 (MQ=255)
                                           ccTGAGCGCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAc                                              <  1:3171065/93‑1 (MQ=255)
                                            cTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAcc                                             <  2:4598689/93‑1 (MQ=255)
                                             tGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTTGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAccg                                            >  2:7524633/1‑93 (MQ=255)
                                              gAGTTCGCGTACCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAccgc                                           <  2:6208826/93‑1 (MQ=255)
                                                gCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAccgccg                                         >  2:4321664/1‑93 (MQ=255)
                                                gCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAccgccg                                         >  1:8169645/1‑93 (MQ=255)
                                                 cTCGGTGAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGa                                        <  2:5672008/93‑1 (MQ=255)
                                                  gcGGGTACCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAg                                       <  2:7173937/92‑1 (MQ=255)
                                                   cGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGt                                      >  2:7584573/1‑93 (MQ=255)
                                                   cGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGt                                      <  1:8593665/93‑1 (MQ=255)
                                                     ggTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGc                                    >  1:6564945/1‑93 (MQ=255)
                                                      gTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCa                                   <  1:5312692/93‑1 (MQ=255)
                                                        aGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATc                                 <  2:5267919/93‑1 (MQ=255)
                                                            cgAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCAct                             >  1:4386489/1‑93 (MQ=255)
                                                             gAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCActt                            >  2:4436168/1‑93 (MQ=255)
                                                              aaCCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCActtc                           >  1:6319631/1‑93 (MQ=255)
                                                              aaCCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCActtc                           >  2:1857695/1‑93 (MQ=255)
                                                               aCCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCActtct                          >  2:702488/1‑93 (MQ=255)
                                                                ccgccgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCActtctt                         >  1:3346567/1‑93 (MQ=255)
                                                                  gccgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCtttt                       >  2:3199325/1‑93 (MQ=255)
                                                                   ccgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTa                      <  1:3748831/93‑1 (MQ=255)
                                                                    cgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTAc                     <  1:5034483/93‑1 (MQ=255)
                                                                     ggTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTGCTTTAcc                    >  1:8276426/1‑93 (MQ=255)
                                                                     ggTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTAcc                    >  2:2555409/1‑93 (MQ=255)
                                                                      gTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCa                   >  2:6522660/1‑93 (MQ=255)
                                                                      gTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCa                   >  2:5340330/1‑93 (MQ=255)
                                                                      gTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCa                   <  2:1229239/93‑1 (MQ=255)
                                                                      gTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCa                   >  1:6917382/1‑93 (MQ=255)
                                                                        ccTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGa                 >  1:3424494/1‑93 (MQ=255)
                                                                        ccTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGa                 >  2:1933393/1‑93 (MQ=255)
                                                                        ccTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGa                 >  2:6427880/1‑93 (MQ=255)
                                                                         cTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGAt                >  1:1363846/1‑93 (MQ=255)
                                                                         cTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGAt                >  2:1656834/1‑93 (MQ=255)
                                                                         cTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGAt                >  1:2994238/1‑93 (MQ=255)
                                                                         cTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGAt                >  1:22905/1‑93 (MQ=255)
                                                                          tttGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATg               >  2:6107380/1‑93 (MQ=255)
                                                                          tttGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATg               <  2:856179/93‑1 (MQ=255)
                                                                             gcttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTcc            >  1:7558883/1‑93 (MQ=255)
                                                                              tttgcCTTTGGTGTCCTAAACGGCATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTccc           <  2:7345493/92‑1 (MQ=255)
                                                                              cttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTccc           >  1:3816095/1‑93 (MQ=255)
                                                                               ttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCt          <  1:2661332/93‑1 (MQ=255)
                                                                               ttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCt          <  1:1242129/93‑1 (MQ=255)
                                                                                 gcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTc        >  2:3109114/1‑93 (MQ=255)
                                                                                 gcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTc        >  1:3486356/1‑93 (MQ=255)
                                                                                    tttAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCa     >  1:8677574/1‑93 (MQ=255)
                                                                                     ttAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCTACTTCTTTTACCAGATGTCCCTTCCCaa    >  1:3936018/1‑93 (MQ=255)
                                                                                      tAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAAt   >  2:499185/1‑93 (MQ=255)
                                                                                      tAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAAt   >  1:2836668/1‑93 (MQ=255)
                                                                                      tAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAAt   <  2:3656035/93‑1 (MQ=255)
                                                                                      tAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAAt   >  1:7468070/1‑93 (MQ=255)
                                                                                       aGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATa  <  1:496698/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATA  >  NC_000913/3922924‑3923103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: