Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 440,417 C→T A51T (GCC→ACC)  xseB ← exonuclease VII small subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913440,4170CT99.0% 1069.8 / ‑4.1 307A51T (GCC→ACC) xseBexonuclease VII small subunit
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base T (152/152);  total (154/153)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 313 total aligned reads displayed.

TACTCATTGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGCCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAGACGGGTTACAA  >  NC_000913/440326‑440506
                                                                                           |                                                                                         
tccTCATTGTCCGGTGTAAAGGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTGGTGCGCGCTGTTCGGCTTGTTGTAATTTGGcc                                                                                          <  2:1536288/91‑1 (MQ=255)
 tcTCATTGTCCGGTGTAAAAGGGGTTAGAGAGGCTTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCt                                                                                         <  1:3927464/92‑1 (MQ=255)
 aCTCATTGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCt                                                                                         <  1:4147637/93‑1 (MQ=255)
 aCTCATTGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCt                                                                                         <  1:6923163/93‑1 (MQ=255)
    cATTGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGcc                                                                                      <  1:1688341/93‑1 (MQ=255)
    cATTGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGcc                                                                                      <  2:1003946/93‑1 (MQ=255)
    cATTGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGcc                                                                                      >  1:7314849/1‑93 (MQ=255)
    cATTGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGcc                                                                                      >  1:3120307/1‑93 (MQ=255)
      ttGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGcccc                                                                                    <  1:5043063/93‑1 (MQ=255)
      ttGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGcccc                                                                                    <  2:3891407/93‑1 (MQ=255)
       tGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCt                                                                                   <  1:8320072/93‑1 (MQ=255)
        gTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTg                                                                                  <  1:7407502/93‑1 (MQ=255)
         tCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTgc                                                                                 >  1:2301981/1‑92 (MQ=255)
         tCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGa                                                                                 >  1:1072533/1‑93 (MQ=255)
         tCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGa                                                                                 <  1:2883307/93‑1 (MQ=255)
          ccGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGAc                                                                                <  2:5734281/93‑1 (MQ=255)
          ccGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGAc                                                                                <  2:2434221/93‑1 (MQ=255)
           cGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACg                                                                               <  2:6388703/93‑1 (MQ=255)
           cGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACg                                                                               >  1:5161487/1‑93 (MQ=255)
            ggTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGt                                                                              >  1:49284/1‑93 (MQ=255)
            ggTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGt                                                                              <  1:390739/93‑1 (MQ=255)
              tgtAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGc                                                                            >  2:7092589/1‑93 (MQ=255)
               gtAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGcc                                                                           <  2:3329846/93‑1 (MQ=255)
                 aaaaGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAg                                                                         <  1:1408957/93‑1 (MQ=255)
                  aaaGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGc                                                                        >  1:1610201/1‑93 (MQ=255)
                   aaGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCt                                                                       <  2:5936146/93‑1 (MQ=255)
                    aGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTg                                                                      >  2:3679291/1‑93 (MQ=255)
                    aGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTg                                                                      <  1:5604620/93‑1 (MQ=255)
                     ggggTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGc                                                                     >  2:4010807/1‑93 (MQ=255)
                      gggTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCa                                                                    <  2:2624370/93‑1 (MQ=255)
                       ggTTAGATAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCAc                                                                   <  1:6016226/93‑1 (MQ=255)
                       ggTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCAc                                                                   <  2:6889025/93‑1 (MQ=255)
                       ggTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCAc                                                                   >  1:1120750/1‑93 (MQ=255)
                          tAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCAcgcc                                                                <  2:859789/93‑1 (MQ=255)
                           agagagGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCAcgccg                                                               >  1:4568033/1‑93 (MQ=255)
                            gagagGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCAcgccgc                                                              >  1:6751711/1‑93 (MQ=255)
                             agagGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCcgcg                                                             >  2:2265667/1‑93 (MQ=255)
                              gagGCGTCTTCATTGTCAGACAGCAGAATTTGTTCGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGt                                                            <  2:7217012/93‑1 (MQ=255)
                              gagGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGt                                                            <  1:5844234/93‑1 (MQ=255)
                              gagGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGt                                                            >  1:6721691/1‑93 (MQ=255)
                                ggCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTc                                                          >  2:4917390/1‑93 (MQ=255)
                                ggCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTc                                                          >  1:1938351/1‑93 (MQ=255)
                                ggCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGCCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTc                                                          >  1:8473044/1‑93 (MQ=255)
                                ggCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGATCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTc                                                          >  1:2738564/1‑93 (MQ=255)
                                   gTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGaa                                                       <  2:6556651/93‑1 (MQ=255)
                                   gTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGaa                                                       <  2:7183587/93‑1 (MQ=255)
                                   gTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGaa                                                       >  2:8783001/1‑93 (MQ=255)
                                    tCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAAc                                                      >  2:941645/1‑93 (MQ=255)
                                    tCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAAc                                                      >  1:8645947/1‑93 (MQ=255)
                                       tCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCg                                                   >  1:2407565/1‑93 (MQ=255)
                                        cATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGt                                                  <  2:4355590/93‑1 (MQ=255)
                                        cATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGt                                                  <  1:658359/93‑1 (MQ=255)
                                         aTTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGtt                                                 >  1:4152667/1‑93 (MQ=255)
                                          ttGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGGTCGAACTCGTTc                                                >  2:27137/1‑93 (MQ=255)
                                              cAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAgcg                                            >  2:8679293/1‑93 (MQ=255)
                                                gACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGcc                                          >  1:8757905/1‑93 (MQ=255)
                                                gACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGcc                                          >  1:3716809/1‑93 (MQ=255)
                                                    gcagAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCtt                                      >  2:1654946/1‑93 (MQ=255)
                                                     cagAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTc                                     <  2:6627950/93‑1 (MQ=255)
                                                      agAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGATCAGCGCCTCTTcc                                    >  1:4770418/1‑93 (MQ=255)
                                                       gAATTTGTACGCGCTGGTCGGCTTGGTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCa                                   <  1:4506035/93‑1 (MQ=255)
                                                          tttGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCg                                >  2:614792/1‑93 (MQ=255)
                                                            tGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGc                              <  1:2688749/93‑1 (MQ=255)
                                                            tGTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGc                              <  1:5361326/93‑1 (MQ=255)
                                                             gTACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCa                             <  2:1790742/93‑1 (MQ=255)
                                                              tACGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAg                            >  1:1300038/1‑93 (MQ=255)
                                                               aCGCGCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGGTCAGCGCCTCTTCCAGCGGCAgg                           >  2:5134825/1‑93 (MQ=255)
                                                                cgcgCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGt                          <  1:1735166/93‑1 (MQ=255)
                                                                cgcgCTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGt                          <  2:125917/93‑1 (MQ=255)
                                                                cgcgCTGTTCGGCTTGTAGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGt                          <  1:7832002/93‑1 (MQ=255)
                                                                 gcgcTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTc                         >  1:2944209/1‑93 (MQ=255)
                                                                 gcgcTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTc                         >  1:7689919/1‑93 (MQ=255)
                                                                  cgcTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCg                        >  2:326953/1‑93 (MQ=255)
                                                                  cgcTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCg                        >  2:5524410/1‑93 (MQ=255)
                                                                   gcTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGc                       <  1:935272/93‑1 (MQ=255)
                                                                   gcTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGc                       >  2:7648200/1‑93 (MQ=255)
                                                                    cTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGcc                      >  2:6298046/1‑93 (MQ=255)
                                                                    cTGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGcc                      >  2:522173/1‑93 (MQ=255)
                                                                     tGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCgtcc                     >  2:4104947/1‑90 (MQ=255)
                                                                     tGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGccc                     >  1:3647148/1‑92 (MQ=255)
                                                                     tGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCa                     >  2:3490305/1‑93 (MQ=255)
                                                                     tGTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGGCGccc                     >  1:7023879/1‑92 (MQ=255)
                                                                      gTTCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCAc                    >  2:2975591/1‑93 (MQ=255)
                                                                      gTTCGGCTTGTTGTAATTTGGTCGGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCAc                    <  2:5956677/93‑1 (MQ=255)
                                                                       ttCGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACt                   >  2:2017305/1‑93 (MQ=255)
                                                                         cGGCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACttt                 <  2:8431256/93‑1 (MQ=255)
                                                                          ggCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTc                >  2:7393604/1‑93 (MQ=255)
                                                                          ggCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTc                >  1:347097/1‑93 (MQ=255)
                                                                           gCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACTCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTcc               <  1:1530357/93‑1 (MQ=255)
                                                                           gCTTGTTGTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTcc               >  1:3386112/1‑93 (MQ=255)
                                                                             ttgttgTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAg             <  2:5449997/93‑1 (MQ=255)
                                                                             ttgttgTAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAg             >  2:8217626/1‑93 (MQ=255)
                                                                               gttgtAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAGAc           <  2:505729/93‑1 (MQ=255)
                                                                                 tgtAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAGACgg         <  1:6247775/93‑1 (MQ=255)
                                                                                   tAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGCACTCGTTCAGCACCTCTTCCAGCGGCAGGTCGCCACTTTCCAGACGGGt       <  2:7809565/93‑1 (MQ=255)
                                                                                   tAATTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAGACGGGt       >  1:8166337/1‑93 (MQ=255)
                                                                                    aaTTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAGACGGGtt      <  2:2069854/93‑1 (MQ=255)
                                                                                     aTTTGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAAGTCGCCACTTTCCAGACGGGTTa     >  2:4735560/1‑93 (MQ=255)
                                                                                      tttGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAGACGGGTTAc    <  2:4560242/93‑1 (MQ=255)
                                                                                       ttGGTCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGACCTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAGACGGGTTACa   <  1:4060260/93‑1 (MQ=255)
                                                                                           |                                                                                         
TACTCATTGTCCGGTGTAAAAGGGGTTAGAGAGGCGTCTTCATTGTCAGACAGCAGAATTTGTACGCGCTGTTCGGCTTGTTGTAATTTGGCCTGCCCCTGACGTGCCAGCTGCACGCCGCGTTCGAACTCGTTCAGCGCCTCTTCCAGCGGCAGGTCGCCACTTTCCAGACGGGTTACAA  >  NC_000913/440326‑440506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑