Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,058,326 A→G T101A (ACC→GCC)  yihL → putative transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,058,3260AG99.5% 695.1 / NA 204T101A (ACC→GCC) yihLputative transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (106/97);  minor base T (0/1);  total (106/98)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 212 total aligned reads displayed.

CCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGC  >  NC_000913/4058237‑4058415
                                                                                         |                                                                                         
cccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCg                                                                                        <  1:6724868/93‑1 (MQ=255)
cccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCg                                                                                        <  1:2437883/93‑1 (MQ=255)
 ccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCga                                                                                       >  2:412604/1‑93 (MQ=255)
   aGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgaga                                                                                     <  1:811051/93‑1 (MQ=255)
   aGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgaga                                                                                     >  1:5721081/1‑93 (MQ=255)
   aGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgaga                                                                                     <  2:2323014/93‑1 (MQ=255)
      cgcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaa                                                                                  <  1:8005944/93‑1 (MQ=255)
      cgcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaa                                                                                  >  2:552675/1‑93 (MQ=255)
       gcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaaa                                                                                 >  1:907479/1‑93 (MQ=255)
       cccaTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaaa                                                                                 <  1:7098585/90‑1 (MQ=255)
        cgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAAc                                                                                <  2:3706221/93‑1 (MQ=255)
         gATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAAcc                                                                               >  1:3905485/1‑93 (MQ=255)
          aTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCg                                                                              >  2:803338/1‑93 (MQ=255)
           tttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGATAAAAACCGt                                                                             >  2:6680636/1‑93 (MQ=255)
           tttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGt                                                                             <  1:3087976/93‑1 (MQ=255)
            ttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTa                                                                            <  2:1450520/93‑1 (MQ=255)
            ttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTa                                                                            <  1:2482734/93‑1 (MQ=255)
            ttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGCGGGTTTGCCGAGAAAAACCGTa                                                                            <  2:5860879/93‑1 (MQ=255)
             tAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAc                                                                           <  2:4844930/93‑1 (MQ=255)
              aaTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAcc                                                                          <  2:911509/93‑1 (MQ=255)
              aaTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAcc                                                                          <  2:7193734/93‑1 (MQ=255)
                 tACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGc                                                                       >  1:1298977/1‑93 (MQ=255)
                    aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat                                                                    <  2:1075028/93‑1 (MQ=255)
                    aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat                                                                    <  2:2114134/93‑1 (MQ=255)
                    aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat                                                                    >  1:4927049/1‑93 (MQ=255)
                     gTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGata                                                                   <  2:8639917/93‑1 (MQ=255)
                         ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc                                                               >  2:1134543/1‑93 (MQ=255)
                         ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc                                                               >  2:76144/1‑93 (MQ=255)
                         ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc                                                               >  1:2135211/1‑93 (MQ=255)
                         ggAGCTGTCGGAGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc                                                               <  2:2781784/93‑1 (MQ=255)
                          gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGTGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc                                                              >  1:5130128/1‑93 (MQ=255)
                          gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc                                                              >  2:5319297/1‑93 (MQ=255)
                          gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc                                                              <  2:7347836/93‑1 (MQ=255)
                          gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc                                                              <  2:2158333/93‑1 (MQ=255)
                          gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc                                                              >  2:7299648/1‑93 (MQ=255)
                          gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc                                                              >  1:3263464/1‑93 (MQ=255)
                           aGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCg                                                             >  2:3619774/1‑93 (MQ=255)
                           aGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCg                                                             >  2:3931658/1‑93 (MQ=255)
                           aGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCg                                                             >  2:5930788/1‑93 (MQ=255)
                            gCTGTCGGCGAGCTTTCAGCGGGCCGTAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCga                                                            >  2:4113395/1‑93 (MQ=255)
                            gCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCga                                                            >  1:7950803/1‑93 (MQ=255)
                              tGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCgaga                                                          <  1:3374922/93‑1 (MQ=255)
                               gTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAc                                                         <  1:6250120/93‑1 (MQ=255)
                               gTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAc                                                         >  2:7900554/1‑93 (MQ=255)
                               gTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAc                                                         <  1:4055706/93‑1 (MQ=255)
                               gTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAc                                                         <  1:7595097/93‑1 (MQ=255)
                                 cGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGc                                                       <  1:6029908/93‑1 (MQ=255)
                                 cGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGc                                                       >  1:1568909/1‑93 (MQ=255)
                                   gCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTc                                                     <  1:1255432/93‑1 (MQ=255)
                                     gAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgc                                                   >  2:1341011/1‑93 (MQ=255)
                                     cggCTTTCAGCGGGCCGCAATTGAGCAAGCGCGAGAGCCTTCCTGGGGGTTTGCGGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgc                                                   <  1:2272665/91‑1 (MQ=255)
                                      aGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAGCAGCGATATTCCCGAGACGCTcgag                                                  >  2:527678/1‑91 (MQ=255)
                                       gCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCgcgc                                                 >  1:1390225/1‑93 (MQ=255)
                                         tttCAGCGGGCGGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCa                                               >  1:8669064/1‑93 (MQ=255)
                                         tttCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCa                                               >  1:4186151/1‑93 (MQ=255)
                                         tttCAGCGGGCCGCAATTGACCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCa                                               <  1:3411730/93‑1 (MQ=255)
                                          ttCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCAc                                              <  1:1714856/93‑1 (MQ=255)
                                           tCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACt                                             >  1:2335439/1‑93 (MQ=255)
                                             aGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGa                                           <  1:4477332/93‑1 (MQ=255)
                                              gCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAt                                          >  1:8463281/1‑93 (MQ=255)
                                              gCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAt                                          <  1:2764555/93‑1 (MQ=255)
                                                 ggCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGc                                       >  1:1831935/1‑93 (MQ=255)
                                                  gCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCGGCGATATTCCCGAGACGCTCGCGCCACTGATTGCa                                      <  1:7526038/93‑1 (MQ=255)
                                                  gCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCa                                      <  2:4362844/93‑1 (MQ=255)
                                                    cGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAGGCTCGCGCCACTGGTTGCAGt                                    >  2:8299330/1‑93 (MQ=255)
                                                     gCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTg                                   <  2:1984897/93‑1 (MQ=255)
                                                     gCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTg                                   >  2:2462537/1‑93 (MQ=255)
                                                     gCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTg                                   >  1:1651926/1‑93 (MQ=255)
                                                       aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTTAc                                 >  1:5408079/1‑93 (MQ=255)
                                                       aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAc                                 <  1:5661767/93‑1 (MQ=255)
                                                       aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAc                                 <  1:151928/93‑1 (MQ=255)
                                                       aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAATGCAGTGAc                                 >  2:8727733/1‑93 (MQ=255)
                                                         ttGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGc                               >  1:820470/1‑93 (MQ=255)
                                                          tGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGcc                              <  2:4684077/93‑1 (MQ=255)
                                                          tGAGCAACGGCGAGAGCCTTCTTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGcc                              <  1:1105727/93‑1 (MQ=255)
                                                           gAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCa                             <  2:166574/93‑1 (MQ=255)
                                                             gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc                           >  2:1852669/1‑93 (MQ=255)
                                                             gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc                           >  2:7510141/1‑93 (MQ=255)
                                                             gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc                           >  1:264649/1‑93 (MQ=255)
                                                             gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc                           >  1:6391414/1‑93 (MQ=255)
                                                             gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc                           >  2:8199070/1‑93 (MQ=255)
                                                               aaGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCaa                         >  1:691188/1‑93 (MQ=255)
                                                                aGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAc                        <  2:8752231/93‑1 (MQ=255)
                                                                  ggCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTg                      <  1:3820758/93‑1 (MQ=255)
                                                                    cGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCTCCACTGATTGCAGTGACGCCATCAACTGaa                    <  1:5419756/93‑1 (MQ=255)
                                                                      agagCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAct                  <  2:697515/93‑1 (MQ=255)
                                                                       gagCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAActc                 >  1:963725/1‑93 (MQ=255)
                                                                        agCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAActct                <  1:5061379/93‑1 (MQ=255)
                                                                         gCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTa               >  1:2542256/1‑93 (MQ=255)
                                                                          ccTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTAt              <  1:7346505/93‑1 (MQ=255)
                                                                          ccTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTAt              <  2:3062073/93‑1 (MQ=255)
                                                                            ttCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCg            >  1:8554565/1‑93 (MQ=255)
                                                                              ccTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCa          >  1:428452/1‑93 (MQ=255)
                                                                               cTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCAt         >  2:2911048/1‑93 (MQ=255)
                                                                                tGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATc        <  1:2103488/93‑1 (MQ=255)
                                                                                tGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATc        >  1:5914170/1‑93 (MQ=255)
                                                                                  ggggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAc      >  2:5624564/1‑93 (MQ=255)
                                                                                   gggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAcc     <  1:5377075/93‑1 (MQ=255)
                                                                                    ggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCg    >  1:854541/1‑93 (MQ=255)
                                                                                      tttGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGc  <  2:643051/93‑1 (MQ=255)
                                                                                         |                                                                                         
CCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGC  >  NC_000913/4058237‑4058415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: