Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,402,992 A→G N243S (AAC→AGC)  purA → adenylosuccinate synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,402,9920AG99.4% 1219.7 / ‑3.8 351N243S (AAC→AGC) purAadenylosuccinate synthetase
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (145/204);  total (145/206)
Fisher's exact test for biased strand distribution p-value = 5.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01

Only 100 of 372 total aligned reads displayed.

GTCAGCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAACACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTCCACTC  >  NC_000913/4402902‑4403081
                                                                                          |                                                                                         
gTCAGCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGTGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAgca                                                                                         <  1:3572958/93‑1 (MQ=255)
gTCAGCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAgca                                                                                         >  1:5725697/1‑93 (MQ=255)
gTCAGCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAgca                                                                                         >  2:1055686/1‑93 (MQ=255)
gTCAGCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAgca                                                                                         <  1:2711527/93‑1 (MQ=255)
 tCAGCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAgcac                                                                                        >  1:8398734/1‑93 (MQ=255)
    gCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGcaccac                                                                                     <  1:138161/93‑1 (MQ=255)
     cGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCAct                                                                                    <  2:4413806/93‑1 (MQ=255)
     cGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCAct                                                                                    <  1:3532191/93‑1 (MQ=255)
      gTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCActg                                                                                   >  1:4218541/1‑93 (MQ=255)
        ggCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCActgct                                                                                 >  2:3546524/1‑93 (MQ=255)
         gCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCAACActgctg                                                                                <  2:4431696/93‑1 (MQ=255)
           gATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCtggt                                                                              <  1:8812089/93‑1 (MQ=255)
            aTTTCGTCATGTGTGAAGGTGCGCAGGGTACGGTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCtggtg                                                                             <  1:4457150/93‑1 (MQ=255)
             tttCGTCATGTTTGAAGATGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCtggtgg                                                                            <  2:7803234/93‑1 (MQ=255)
              ttCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGgtggc                                                                           >  2:7760057/1‑93 (MQ=255)
               tagTCATGTTTGAAGTTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGgtggcg                                                                          <  2:8441078/91‑1 (MQ=255)
                cGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGgtggcgt                                                                         <  2:3120703/93‑1 (MQ=255)
                cGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGgtggcgt                                                                         <  2:2061281/93‑1 (MQ=255)
                 gTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGgtggcgtg                                                                        >  2:3769345/1‑93 (MQ=255)
                   cATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGgtggcgtggc                                                                      >  1:334821/1‑93 (MQ=255)
                      gTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGAc                                                                   >  1:2963330/1‑93 (MQ=255)
                      gTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGAc                                                                   >  2:2842178/1‑93 (MQ=255)
                       tttGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGAcc                                                                  >  2:2763232/1‑93 (MQ=255)
                       tttGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGAcc                                                                  >  2:7998617/1‑93 (MQ=255)
                        ttGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCg                                                                 >  1:817869/1‑93 (MQ=255)
                              gTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCg                                                           >  1:1888981/1‑93 (MQ=255)
                               tGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCgg                                                          >  1:601023/1‑93 (MQ=255)
                                gcgcAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGc                                                         >  1:4792259/1‑93 (MQ=255)
                                 cgcAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGcc                                                        >  1:7723363/1‑93 (MQ=255)
                                  gcAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCt                                                       >  2:6602153/1‑93 (MQ=255)
                                  gcAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCt                                                       >  1:7919846/1‑93 (MQ=255)
                                   cAGGGTACTCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTg                                                      <  1:7150384/93‑1 (MQ=255)
                                   cAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTg                                                      <  1:4611685/93‑1 (MQ=255)
                                   cAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTg                                                      <  1:4984296/93‑1 (MQ=255)
                                   cAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTg                                                      >  2:5068063/1‑93 (MQ=255)
                                    atggTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTgg                                                     >  1:779410/3‑93 (MQ=255)
                                    agtgTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTgg                                                     <  2:8769017/90‑1 (MQ=255)
                                    aGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTgg                                                     <  1:6858615/93‑1 (MQ=255)
                                    aGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTgg                                                     <  1:3181924/93‑1 (MQ=255)
                                    aGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTgg                                                     <  1:7613379/93‑1 (MQ=255)
                                      ggTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGc                                                   >  1:6391741/1‑93 (MQ=255)
                                      ggTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGc                                                   <  2:1380358/93‑1 (MQ=255)
                                      ggTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGc                                                   <  1:991366/93‑1 (MQ=255)
                                       gTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGcc                                                  <  2:2955011/93‑1 (MQ=255)
                                        tACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGccc                                                 >  1:6644369/1‑93 (MQ=255)
                                        tACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGccc                                                 <  1:2535132/93‑1 (MQ=255)
                                        gaCGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGccc                                                 <  1:2249089/92‑1 (MQ=255)
                                         aCGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCcg                                                <  1:3132529/93‑1 (MQ=255)
                                          cGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCcgc                                               <  1:7997234/93‑1 (MQ=255)
                                          cGCTGCTGGATATCCCCCACGGTCCTTGTCCGTACCTAACTTCTTCCAGCTCCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCcgc                                               <  2:730230/93‑1 (MQ=255)
                                               ctgGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTAt                                          >  1:5976098/1‑93 (MQ=255)
                                                 ggATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGt                                        >  2:5729180/1‑93 (MQ=255)
                                                 ggATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGt                                        >  2:4495883/1‑93 (MQ=255)
                                                  gATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGtt                                       <  2:6108798/93‑1 (MQ=255)
                                                  gATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGtt                                       <  1:6689979/93‑1 (MQ=255)
                                                   atatCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTg                                      >  2:6839312/1‑93 (MQ=255)
                                                    tatCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGa                                     >  1:8656302/1‑93 (MQ=255)
                                                    tatCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGa                                     >  1:4742256/1‑93 (MQ=255)
                                                    tatCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGa                                     <  1:3927455/93‑1 (MQ=255)
                                                     atCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGAt                                    >  1:5330604/1‑93 (MQ=255)
                                                     atCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGAt                                    <  1:1563306/93‑1 (MQ=255)
                                                      tCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGAtt                                   <  2:5166123/93‑1 (MQ=255)
                                                      tCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGAtt                                   <  1:1007518/93‑1 (MQ=255)
                                                      tCGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGAtt                                   <  1:5533217/93‑1 (MQ=255)
                                                       cGACCACGTGCCTTATCCGTACGTAACTTCTTCCAGCTCCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTa                                  <  2:3405218/93‑1 (MQ=255)
                                                       cGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTa                                  <  1:8255282/93‑1 (MQ=255)
                                                       cGACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTa                                  <  1:2589739/93‑1 (MQ=255)
                                                        gACCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTAc                                 <  1:1688354/93‑1 (MQ=255)
                                                         aCCACGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACg                                >  1:6919970/1‑93 (MQ=255)
                                                          ccACGGTACTTATCCGTACGTAACTTCTTCCAGCACACTGCTGGTAGCGTGGGGGCCGGGTCCGGCCTGGGCCCGCGTTATGTTTATTTCGtt                              >  1:112922/1‑93 (MQ=255)
                                                            aCGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTc                             >  2:6339386/1‑93 (MQ=255)
                                                            aCGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTc                             >  2:4209856/1‑93 (MQ=255)
                                                             cGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCt                            >  1:207091/1‑93 (MQ=255)
                                                             cGGTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCt                            <  2:5513911/93‑1 (MQ=255)
                                                              ggTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTg                           <  1:7280966/93‑1 (MQ=255)
                                                               gTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTgg                          >  1:6971255/1‑93 (MQ=255)
                                                               gTACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTgg                          >  1:1751986/1‑93 (MQ=255)
                                                                tACTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTggg                         <  2:5838548/93‑1 (MQ=255)
                                                                 aCTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGt                        >  1:6123434/1‑93 (MQ=255)
                                                                  cTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTa                       <  2:5972102/93‑1 (MQ=255)
                                                                  cTTATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGCCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTgggga                       >  1:5600397/1‑91 (MQ=255)
                                                                   ttATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTAt                      >  2:244879/1‑93 (MQ=255)
                                                                   ttATCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTAt                      >  2:1715085/1‑93 (MQ=255)
                                                                      tCCGTACGTAACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCt                   >  1:6481543/1‑93 (MQ=255)
                                                                        cgtacgtaACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCa                 >  1:4305846/1‑93 (MQ=255)
                                                                         ctacgtaACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTATGGGTATCCTCaa                <  1:7544733/92‑1 (MQ=255)
                                                                          tacgtaACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCaaa               <  2:4708345/93‑1 (MQ=255)
                                                                           acgtaACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAg              >  2:2581490/1‑93 (MQ=255)
                                                                            cgtaACTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGc             >  2:4812036/1‑93 (MQ=255)
                                                                               aaCTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGTTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTa          <  2:1113609/93‑1 (MQ=255)
                                                                                aCTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTAc         <  1:5208460/93‑1 (MQ=255)
                                                                                aCTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTAc         <  1:2351664/93‑1 (MQ=255)
                                                                                aCTTCTTCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTAc         <  2:1795120/93‑1 (MQ=255)
                                                                                 cttcttCCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACt        >  1:4595086/1‑93 (MQ=255)
                                                                                  ttcttcCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTc       <  2:4043790/93‑1 (MQ=255)
                                                                                  ttcttcCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTc       <  2:8240564/93‑1 (MQ=255)
                                                                                   tcttcCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTcc      >  2:6244507/1‑93 (MQ=255)
                                                                                   tcttcCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTcc      <  1:362112/93‑1 (MQ=255)
                                                                                     ttcCAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTCCAc    >  2:8152613/1‑93 (MQ=255)
                                                                                       ccAGCACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTCCACTc  <  2:7122149/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTCAGCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAACACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTCCACTC  >  NC_000913/4402902‑4403081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: