| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 562,546 | A→G | intergenic (+4/‑7) | sfmH → / → sfmF | involved in fimbrial asembly/putative fimbrial‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 562,546 | 0 | A | G | 99.7% | 964.0 / ‑4.7 | 284 | intergenic (+4/‑7) | sfmH/sfmF | involved in fimbrial asembly/putative fimbrial‑like protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (109/174); total (110/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.30e-01 | |||||||||||
Only 100 of 290 total aligned reads displayed.
CGCGCCTGGCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGATTAA > NC_000913/562456‑562635 | cgcCTGGCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGga > 2:4479265/1‑93 (MQ=255) ccTGGCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGGATTTACGCGTCGATTATCAATGAGGTGCGgaga > 1:2240857/1‑93 (MQ=255) tgcccTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTTGGGTATTTACGCTTCGATTATCAATGAGGTGCGGAGAAt < 2:7147766/90‑1 (MQ=255) tGGCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAAt < 1:8596353/93‑1 (MQ=255) tGGCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAAt < 2:1409740/93‑1 (MQ=255) ggCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATg < 1:4686019/93‑1 (MQ=255) gCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATga > 1:1008666/1‑93 (MQ=255) gCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATga < 1:917546/93‑1 (MQ=255) ccTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATgag < 1:55029/93‑1 (MQ=255) cTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATgaga < 1:7066410/93‑1 (MQ=255) tATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATgggag > 2:3926327/1‑92 (MQ=255) tATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaa > 1:7927462/1‑93 (MQ=255) tATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaa > 1:7423741/1‑93 (MQ=255) aTCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaag < 2:8370106/93‑1 (MQ=255) aTCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaag > 2:7462166/1‑93 (MQ=255) tCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaaga < 2:6791543/93‑1 (MQ=255) tCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaaga > 1:3200620/1‑93 (MQ=255) aGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGAGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGt < 1:2958825/93‑1 (MQ=255) gTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTa < 2:4833861/93‑1 (MQ=255) gTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTa < 2:2084681/93‑1 (MQ=255) gTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGGATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTa > 2:5181677/1‑93 (MQ=255) tATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTAc < 1:2475917/93‑1 (MQ=255) tATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTAc < 2:7252986/93‑1 (MQ=255) tATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTAc > 2:4894927/1‑93 (MQ=255) aTTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTAct < 1:982597/93‑1 (MQ=255) aTTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTAct > 1:2320761/1‑93 (MQ=255) ttACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActc < 1:4755480/93‑1 (MQ=255) tACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActct < 2:4582211/93‑1 (MQ=255) tACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActct > 1:7777232/1‑93 (MQ=255) ccGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCttt < 2:3308652/93‑1 (MQ=255) ccGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCttt > 2:7420149/1‑93 (MQ=255) ccGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGAACTCttt > 1:1966868/1‑93 (MQ=255) cGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTa < 1:8546698/93‑1 (MQ=255) gTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGc > 1:2718500/1‑93 (MQ=255) aaaaaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGt < 1:2080132/93‑1 (MQ=255) aaaaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGtt > 2:3709583/1‑93 (MQ=255) aaaaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGtt > 1:5315757/1‑93 (MQ=255) aaaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGGATGAGAAGAGTACTCTTTAGCTGttt > 1:6217455/1‑93 (MQ=255) aaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTc < 2:1562381/93‑1 (MQ=255) aaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTc > 2:7775872/1‑93 (MQ=255) ccgaccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTg > 2:2693219/1‑93 (MQ=255) ccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCggg > 2:8491587/1‑93 (MQ=255) ccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCggg > 1:4084155/1‑93 (MQ=255) ccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCggg > 2:6475101/1‑93 (MQ=255) cgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGc < 1:8113135/93‑1 (MQ=255) aGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTAc < 2:2845697/93‑1 (MQ=255) aGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTAc < 2:3137356/93‑1 (MQ=255) ggCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtg < 2:8619053/93‑1 (MQ=255) ccGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtgtg < 2:2893236/93‑1 (MQ=255) ccGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtgtg < 2:8647121/93‑1 (MQ=255) cGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTgg > 1:6049873/1‑93 (MQ=255) cGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTgg < 2:6982749/93‑1 (MQ=255) gTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGATTGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGa > 1:8174601/1‑93 (MQ=255) tttAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAg < 1:616338/93‑1 (MQ=255) tttAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAg > 1:2531402/1‑93 (MQ=255) tAGCGCGGTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGtt < 1:5160020/93‑1 (MQ=255) tAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGtt < 1:2918290/93‑1 (MQ=255) cgcgcTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCa < 1:14118/93‑1 (MQ=255) gcgcTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAg < 1:8190428/93‑1 (MQ=255) gcgcTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAg < 2:4208642/93‑1 (MQ=255) cgcTGGGGTAATTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGt < 1:7511518/93‑1 (MQ=255) gcTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTg < 1:7008632/93‑1 (MQ=255) cTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTgg > 2:4295443/1‑93 (MQ=255) tGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACCGTGGATTTCCAGTGGa < 2:8084554/93‑1 (MQ=255) ggggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGAt < 1:54155/93‑1 (MQ=255) ggggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGAt < 1:4182120/93‑1 (MQ=255) ggggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGAt > 1:3709095/1‑93 (MQ=255) ggggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGAt < 2:3426220/93‑1 (MQ=255) gggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATg > 1:338714/1‑93 (MQ=255) ggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATgg < 1:188662/93‑1 (MQ=255) ggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATgg < 2:589079/93‑1 (MQ=255) aTTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCa > 2:6156585/1‑93 (MQ=255) tttACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTGCGGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAg < 2:8456710/93‑1 (MQ=255) ttACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGt < 2:6395343/93‑1 (MQ=255) ttACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGt < 2:2247365/93‑1 (MQ=255) tACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGtt < 1:1669443/93‑1 (MQ=255) gcgTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGAc > 1:4907772/1‑93 (MQ=255) cgTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGAcc > 2:1285101/1‑93 (MQ=255) cgTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGAcc < 1:2166306/93‑1 (MQ=255) tCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCt < 1:8456507/93‑1 (MQ=255) cGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCtt < 2:1511349/93‑1 (MQ=255) gATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGGTGACCCttt > 1:1220741/1‑93 (MQ=255) aTTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTa < 2:5840610/93‑1 (MQ=255) aTTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTa < 2:4047950/93‑1 (MQ=255) aTTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAACTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTTACCCTTTa > 2:5486478/1‑93 (MQ=255) ttATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAg < 1:1132165/93‑1 (MQ=255) ttATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAg < 2:1749192/93‑1 (MQ=255) ttATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAg < 2:750145/93‑1 (MQ=255) ttATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAg < 1:6908057/93‑1 (MQ=255) tCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGaa < 2:2642807/93‑1 (MQ=255) tCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGaa < 1:5099424/93‑1 (MQ=255) cAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAAc < 1:6009559/93‑1 (MQ=255) cAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAAc < 2:4159308/93‑1 (MQ=255) aaTGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACg > 2:3010388/1‑93 (MQ=255) aaTGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACg > 1:5733221/1‑93 (MQ=255) aaTGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACg > 2:538604/1‑93 (MQ=255) aTGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGa < 1:1229831/93‑1 (MQ=255) gAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGAtt < 1:1608740/93‑1 (MQ=255) aGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGATTa < 2:7387952/93‑1 (MQ=255) aGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGATTa < 1:6577497/93‑1 (MQ=255) | CGCGCCTGGCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGATTAA > NC_000913/562456‑562635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |