Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 844,809 A→G intergenic (‑106/+155) ybiO ← / ← glnQ putative transport protein/ATP‑binding component of glutamine high‑affinity transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913844,8090AG99.2% 896.6 / NA 262intergenic (‑106/+155)ybiO/glnQputative transport protein/ATP‑binding component of glutamine high‑affinity transport system
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (137/123);  minor base T (0/2);  total (137/125)
Fisher's exact test for biased strand distribution p-value = 2.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 277 total aligned reads displayed.

AAAATAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCA  >  NC_000913/844719‑844898
                                                                                          |                                                                                         
aaaaTAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAgggggg                                                                                         >  2:5396544/1‑93 (MQ=255)
  aaTAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGgggggag                                                                                       >  2:7152624/1‑92 (MQ=255)
  aaTAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGaa                                                                                       >  2:2730778/1‑93 (MQ=255)
   aTAGAGCAAAAAGAGAAGTATAGAGGCTGGAGGAGTGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAg                                                                                      <  2:4062383/93‑1 (MQ=255)
    tAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAACGGGGGGAAgg                                                                                     >  2:4130637/1‑93 (MQ=255)
     agagCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAggg                                                                                    <  2:6969945/93‑1 (MQ=255)
       agCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGat                                                                                  >  1:7431672/1‑93 (MQ=255)
        gCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGata                                                                                 >  1:7479852/1‑93 (MQ=255)
        gCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGata                                                                                 >  2:3040068/1‑93 (MQ=255)
           aaaaTATAAGTATAGATGCTAGAGGAGTGCAGATTTTAAATGAGAGGAATGTTGTGCGGCTCCCTTTCGGGTGAAAGGGGGGAAGGGATCTTa                                                                              <  2:7612400/93‑1 (MQ=255)
              aGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGc                                                                           >  1:5615724/1‑93 (MQ=255)
               gATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCa                                                                          >  1:7624094/1‑93 (MQ=255)
               gATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCa                                                                          >  1:4612550/1‑93 (MQ=255)
               gATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCa                                                                          <  2:7092468/93‑1 (MQ=255)
                aTAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAg                                                                         >  2:5176044/1‑93 (MQ=255)
                aTAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAg                                                                         <  1:5788961/93‑1 (MQ=255)
                 tAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAgg                                                                        <  2:1801401/93‑1 (MQ=255)
                  aaGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGt                                                                       <  1:6992262/93‑1 (MQ=255)
                   aGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGtt                                                                      <  1:3809351/93‑1 (MQ=255)
                   aGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGtt                                                                      >  2:8695536/1‑93 (MQ=255)
                     tataGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGc                                                                    <  1:204813/93‑1 (MQ=255)
                      ataGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCt                                                                   <  2:1073324/93‑1 (MQ=255)
                      ataGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCt                                                                   >  2:5640163/1‑93 (MQ=255)
                      ataGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCt                                                                   <  1:5264759/93‑1 (MQ=255)
                       taGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTg                                                                  >  1:3538634/1‑93 (MQ=255)
                       taGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTg                                                                  >  2:4370903/1‑93 (MQ=255)
                        aGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGCGGGGAAGGGATATTAAGCAGGTTGCTGa                                                                 <  1:642461/93‑1 (MQ=255)
                          aTGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACa                                                               >  2:4129798/1‑93 (MQ=255)
                          aTGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACa                                                               >  1:5389645/1‑93 (MQ=255)
                           tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACaa                                                              <  1:1254619/93‑1 (MQ=255)
                            gCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAAc                                                             <  1:1809932/93‑1 (MQ=255)
                             cTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACg                                                            >  1:8703678/1‑93 (MQ=255)
                              tGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGt                                                           <  2:4630510/93‑1 (MQ=255)
                               ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTg                                                          >  2:3631462/1‑93 (MQ=255)
                               ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTg                                                          >  2:6214169/1‑93 (MQ=255)
                                gaggagGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGc                                                         >  1:3639591/1‑93 (MQ=255)
                                gaggagGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGc                                                         <  2:1266861/93‑1 (MQ=255)
                                   gaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGAggg                                                      >  1:7326063/1‑93 (MQ=255)
                                    aggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGc                                                     <  1:362699/93‑1 (MQ=255)
                                    aggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGc                                                     <  1:7005906/93‑1 (MQ=255)
                                     ggggCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCt                                                    >  2:1923936/1‑93 (MQ=255)
                                     ggggCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCt                                                    >  2:414730/1‑93 (MQ=255)
                                     ggggCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCt                                                    >  1:644528/1‑93 (MQ=255)
                                       ggCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCttt                                                  <  2:895803/93‑1 (MQ=255)
                                        gCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCtttt                                                 <  1:247897/93‑1 (MQ=255)
                                         ggATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCttttt                                                <  1:1195784/92‑1 (MQ=255)
                                          gATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCtttttt                                               <  2:4300419/93‑1 (MQ=255)
                                          gATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCtttttt                                               <  2:328566/93‑1 (MQ=255)
                                          gATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCtttttt                                               >  1:6693032/1‑93 (MQ=255)
                                            ttttAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGc                                             >  1:6188529/1‑93 (MQ=255)
                                                aagtGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAGGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGa                                         <  2:7819606/90‑1 (MQ=255)
                                                 aaTGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGAt                                        >  2:1168208/1‑93 (MQ=255)
                                                 aaTGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGAt                                        <  2:4559477/93‑1 (MQ=255)
                                                 aaTGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGAt                                        <  1:7697457/93‑1 (MQ=255)
                                                  aTGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATg                                       <  1:2908303/93‑1 (MQ=255)
                                                    gagaGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATgcg                                     <  2:7359914/93‑1 (MQ=255)
                                                    gagaGGAATCTGGTGTGCCTCCCTTTCGGGGGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATgcg                                     >  2:8465098/1‑93 (MQ=255)
                                                        ggAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGt                                 <  1:8061092/93‑1 (MQ=255)
                                                         gAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTg                                >  2:3920434/1‑93 (MQ=255)
                                                          aaTCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGa                               >  2:6607750/1‑93 (MQ=255)
                                                           aTCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGaa                              >  1:5725815/1‑93 (MQ=255)
                                                           aTCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGaa                              <  1:4851162/93‑1 (MQ=255)
                                                           aTCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGaa                              <  1:7731650/93‑1 (MQ=255)
                                                           aTCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGaa                              >  2:8410274/1‑93 (MQ=255)
                                                           aTCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGaa                              <  1:2222076/93‑1 (MQ=255)
                                                           aTCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGaa                              <  1:2725055/93‑1 (MQ=255)
                                                            tCTGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAAc                             >  2:1088681/1‑93 (MQ=255)
                                                            tCTGGTGTGCCTCCCTTGCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAAc                             <  2:2313147/93‑1 (MQ=255)
                                                              tGGTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGc                           >  2:5702523/1‑93 (MQ=255)
                                                               ggTGTGCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGcc                          >  1:5075921/1‑93 (MQ=255)
                                                                    gCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATc                     <  1:7079809/93‑1 (MQ=255)
                                                                    gCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATc                     <  1:5921194/93‑1 (MQ=255)
                                                                    gCCTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATc                     <  1:7262560/93‑1 (MQ=255)
                                                                     ccTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATcc                    <  2:5327847/93‑1 (MQ=255)
                                                                     ccTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATcc                    >  1:392251/1‑93 (MQ=255)
                                                                     ccTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATcc                    >  1:4111310/1‑93 (MQ=255)
                                                                      cTCCCTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCg                   <  1:30841/93‑1 (MQ=255)
                                                                        cccTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTc                 <  1:2985483/93‑1 (MQ=255)
                                                                        cccTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTc                 >  2:1565589/1‑93 (MQ=255)
                                                                        cccTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTc                 <  1:4479887/93‑1 (MQ=255)
                                                                         ccTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTcc                >  1:606719/1‑93 (MQ=255)
                                                                         ccTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTcc                >  1:1468405/1‑93 (MQ=255)
                                                                          cTTTCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCt               >  2:8230520/1‑93 (MQ=255)
                                                                           tttCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTa              >  1:1319070/1‑93 (MQ=255)
                                                                             tCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACa            >  2:2467586/1‑93 (MQ=255)
                                                                             tCGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACa            >  1:2317366/1‑93 (MQ=255)
                                                                              cGGGTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACaa           <  1:2146851/93‑1 (MQ=255)
                                                                               gggTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAg          <  1:4698875/93‑1 (MQ=255)
                                                                                ggTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGt         >  2:6070877/1‑93 (MQ=255)
                                                                                ggTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGt         >  1:8274301/1‑93 (MQ=255)
                                                                                ggTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGt         <  2:4808883/93‑1 (MQ=255)
                                                                                 gTGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGtt        <  2:1472370/93‑1 (MQ=255)
                                                                                  tGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTc       <  1:1669932/93‑1 (MQ=255)
                                                                                  tGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTc       >  2:7233859/1‑93 (MQ=255)
                                                                                  tGAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTc       <  1:6263706/93‑1 (MQ=255)
                                                                                   gAAAGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCa      >  2:3521239/1‑93 (MQ=255)
                                                                                     aaGGGGGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATg    <  2:5886824/93‑1 (MQ=255)
                                                                                       ggggggAATGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCa  <  2:4956886/93‑1 (MQ=255)
                                                                                       ggggggAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCa  <  2:6432173/93‑1 (MQ=255)
                                                                                       ggggggAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCa  >  1:330708/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAAATAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCA  >  NC_000913/844719‑844898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: