BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	914,564	T→C	intergenic (‑436/+11)	ybjE ← / ← aqpZ	putative surface protein/transmembrane water channel

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	914,564	0	T	C	100.0%	1069.6 / NA	308	intergenic (‑436/+11)	ybjE/aqpZ	putative surface protein/transmembrane water channel
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (171/137); total (171/137)

Only 100 of 315 total aligned reads displayed.

TATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAAC  >  NC_000913/914474‑914653

tatGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTc                                                                                         <  1:6290486/93‑1 (MQ=255)

tatGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTc                                                                                         >  2:2873442/1‑93 (MQ=255)

tatGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTc                                                                                         <  2:5356719/93‑1 (MQ=255)

tatGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTc                                                                                         <  1:4205013/93‑1 (MQ=255)

   gTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGc                                                                                      <  1:480086/93‑1 (MQ=255)

    ttGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCg                                                                                     >  2:4527988/1‑93 (MQ=255)

     tGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGt                                                                                    >  1:2417397/1‑93 (MQ=255)

     tGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGt                                                                                    <  2:3721416/93‑1 (MQ=255)

      gCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGtt                                                                                   >  2:5771073/1‑93 (MQ=255)

         tAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGttaat                                                                                <  1:3635964/93‑1 (MQ=255)

          aGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGttaatt                                                                               <  2:6175118/93‑1 (MQ=255)

           gCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGttaatta                                                                              <  2:2459577/93‑1 (MQ=255)

             tCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTtaattaat                                                                            >  2:8697927/1‑93 (MQ=255)

             tCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTtaattaat                                                                            >  2:1068067/1‑93 (MQ=255)

             tCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTtaattaat                                                                            <  2:1663912/93‑1 (MQ=255)

              cATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATc                                                                           >  2:2110679/1‑93 (MQ=255)

              cATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATc                                                                           <  1:7720254/93‑1 (MQ=255)

               aTGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCa                                                                          >  2:5701056/1‑93 (MQ=255)

               aTGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCa                                                                          <  1:372092/93‑1 (MQ=255)

                tGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCAc                                                                         <  1:7934183/93‑1 (MQ=255)

                  aaaGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGc                                                                       <  2:8367589/93‑1 (MQ=255)

                  aaaGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGc                                                                       <  2:7177485/93‑1 (MQ=255)

                     ggAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCttt                                                                    <  2:5850612/93‑1 (MQ=255)

                     ggAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCttt                                                                    <  2:2332595/93‑1 (MQ=255)

                     ggAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCttt                                                                    >  1:5769467/1‑93 (MQ=255)

                      gAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCtttt                                                                   >  2:6750217/1‑93 (MQ=255)

                      gAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCtttt                                                                   >  1:789496/1‑93 (MQ=255)

                        gcgcAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTcc                                                                 >  2:6123259/1‑93 (MQ=255)

                           caacaaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCcagc                                                              >  1:6586566/1‑93 (MQ=255)

                             acaaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCcagcag                                                            <  2:4073350/93‑1 (MQ=255)

                             acaaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCcagcag                                                            <  2:1267991/93‑1 (MQ=255)

                             acaaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCcagcag                                                            >  2:2605119/1‑93 (MQ=255)

                              caaGATGATGAATCAACTTATAACAACATCTTAAAAAAACGGCTGACATTACGCCAGGCCCTCTGCGTTAATTAATGACGCTTTTCcagcatg                                                           >  2:5409801/1‑91 (MQ=255)

                              caaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAgg                                                           <  1:1785611/93‑1 (MQ=255)

                               aaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAggg                                                          >  1:383858/1‑93 (MQ=255)

                               aaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAggg                                                          <  2:7779639/93‑1 (MQ=255)

                               aaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAggg                                                          >  1:5600136/1‑93 (MQ=255)

                               aaGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAggg                                                          >  2:471517/1‑93 (MQ=255)

                                aGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGt                                                         >  2:7517199/1‑93 (MQ=255)

                                aGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGt                                                         <  2:3075931/93‑1 (MQ=255)

                                 gatgatGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTc                                                        <  1:828236/93‑1 (MQ=255)

                                 gatgatGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTc                                                        <  2:737576/93‑1 (MQ=255)

                                 gatgatGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTc                                                        >  1:4570915/1‑93 (MQ=255)

                                  atgatgAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTcc                                                       <  1:6444025/93‑1 (MQ=255)

                                   tgatgaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCg                                                      >  1:1716489/1‑93 (MQ=255)

                                    gatgaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCgg                                                     <  1:4742378/93‑1 (MQ=255)

                                    gatgaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCgg                                                     <  1:840453/93‑1 (MQ=255)

                                      tgaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTa                                                   <  1:4892804/93‑1 (MQ=255)

                                       gaATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTaa                                                  >  1:1254439/1‑93 (MQ=255)

                                        aaTCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTaaa                                                 >  1:84907/1‑93 (MQ=255)

                                        aaTCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTaaa                                                 <  1:6131761/93‑1 (MQ=255)

                                        aaTCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCAAGCTTTTCCAGCAGGGTCCGGTaaa                                                 >  1:3941278/1‑93 (MQ=255)

                                         aTCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAAt                                                <  1:7088241/93‑1 (MQ=255)

                                         aTCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAAt                                                <  2:6404552/93‑1 (MQ=255)

                                          tCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATc                                               <  1:749056/93‑1 (MQ=255)

                                          tCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATc                                               >  2:3858188/1‑93 (MQ=255)

                                          tCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATc                                               <  1:8605277/93‑1 (MQ=255)

                                          acAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATc                                               <  1:506377/92‑1 (MQ=255)

                                            aaCATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAg                                             >  2:5013050/1‑93 (MQ=255)

                                               atatAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGacc                                          <  2:7050211/93‑1 (MQ=255)

                                                tataACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGacca                                         >  1:6062779/1‑93 (MQ=255)

                                                tataACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGacca                                         >  1:304881/1‑93 (MQ=255)

                                                tataACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGacca                                         >  2:3521960/1‑93 (MQ=255)

                                                tataACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGacaa                                         >  1:606189/1‑91 (MQ=255)

                                                  taACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGATTTTCCAGCAGGGTCCGGTAAATCAGaccacc                                       >  1:3774128/1‑93 (MQ=255)

                                                   aacaacATCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCg                                      <  1:27750/93‑1 (MQ=255)

                                                    acaacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGa                                     <  1:3310804/93‑1 (MQ=255)

                                                    acaacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGa                                     >  1:3787053/1‑93 (MQ=255)

                                                     caacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGAt                                    >  1:7370623/1‑93 (MQ=255)

                                                      aacaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATa                                   >  2:3404238/1‑93 (MQ=255)

                                                       acaTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATaa                                  <  1:5877811/93‑1 (MQ=255)

                                                        caTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAAt                                 <  2:5091143/93‑1 (MQ=255)

                                                        caTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAAt                                 >  2:8218965/1‑93 (MQ=255)

                                                        caTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAAt                                 >  1:5511837/1‑93 (MQ=255)

                                                         aTCTTAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATg                                >  2:5496355/1‑93 (MQ=255)

                                                            ttAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATgccg                             >  2:7985314/1‑93 (MQ=255)

                                                             tAAAAAAAGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATgccgc                            <  1:8132987/93‑1 (MQ=255)

                                                                 aaaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGAc                        >  2:4614095/1‑93 (MQ=255)

                                                                  aaaGGCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATCATGCCGCCGACa                       >  1:6929821/1‑93 (MQ=255)

                                                                     ggCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAAtt                    <  1:6690655/93‑1 (MQ=255)

                                                                      gCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTg                   <  1:5417505/93‑1 (MQ=255)

                                                                      gCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTg                   <  2:2794317/93‑1 (MQ=255)

                                                                      gCCTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTg                   <  1:3090998/93‑1 (MQ=255)

                                                                      gCCTGACATTACGCCAGGCCCACTGCGTTAATTAATCACGCTTTTCCAGCAGGGACCGGTAAATCAGACCACCGATAATGCCGCCGACAATTg                   >  1:6471951/1‑93 (MQ=255)

                                                                       ccTGACATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTgg                  >  2:397754/1‑93 (MQ=255)

                                                                           aCATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGcacc              <  2:6934093/93‑1 (MQ=255)

                                                                           aCATTACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGcacc              <  1:294236/93‑1 (MQ=255)

                                                                               tACGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCAccc          >  2:4940601/1‑93 (MQ=255)

                                                                                aCGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCa         <  1:5911346/93‑1 (MQ=255)

                                                                                aCGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCa         >  2:7586217/1‑93 (MQ=255)

                                                                                aCGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCa         <  1:2085332/93‑1 (MQ=255)

                                                                                aCGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCa         >  2:8467880/1‑93 (MQ=255)

                                                                                 cGCCAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGCTAATGCCGCCGACAATTGGCACCACCCag        >  1:5197976/1‑93 (MQ=255)

                                                                                   ccAGTCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCagaa      <  1:3512012/93‑1 (MQ=255)

                                                                                   ccAGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCagaa      >  2:4254605/1‑93 (MQ=255)

                                                                                     aGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCagaaga    >  2:1919857/1‑93 (MQ=255)

                                                                                     aGGCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCagaaga    >  1:911060/1‑93 (MQ=255)

                                                                                      ggCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAgaagaa   >  2:3258898/1‑93 (MQ=255)

                                                                                      ggCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAgaagaa   <  2:5574562/93‑1 (MQ=255)

                                                                                       gCCCTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAAc  >  1:2003371/1‑93 (MQ=255)

TATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCCAGCAGGGTCCGGTAAATCAGACCACCGATAATGCCGCCGACAATTGGCACCACCCAGAAGAAC  >  NC_000913/914474‑914653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`