BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	969,158	C→T	R183C (CGC→TGC)	ycaQ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	969,158	0	C	T	99.3%	930.1 / ‑4.2	270	R183C (CGC→TGC)	ycaQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (141/127); total (142/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01

Only 100 of 280 total aligned reads displayed.

GGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTG  >  NC_000913/969068‑969247

ggCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAgtgc                                                                                         <  1:8130753/93‑1 (MQ=255)

ggCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAgtgc                                                                                         <  2:5966128/93‑1 (MQ=255)

 gCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGtgcg                                                                                        >  1:409326/1‑93 (MQ=255)

  cTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGt                                                                                       >  1:878613/1‑93 (MQ=255)

   tggtggGAATGGAAGCCGCATAAACGGCATCTTGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGtt                                                                                      <  2:7719054/93‑1 (MQ=255)

   tggtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGtt                                                                                      >  2:2577996/1‑93 (MQ=255)

   tggtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGtt                                                                                      <  2:6207521/93‑1 (MQ=255)

     gtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTa                                                                                    >  2:4825099/1‑93 (MQ=255)

     gtggGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTa                                                                                    <  1:7396469/93‑1 (MQ=255)

       gggAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTAta                                                                                  >  2:7150850/1‑92 (MQ=255)

         gAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGAt                                                                                >  2:8793502/1‑93 (MQ=255)

          aaTGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGAtt                                                                               <  1:461077/93‑1 (MQ=255)

             ggAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCTTTTATGATTTaa                                                                            <  1:2920947/93‑1 (MQ=255)

              gAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAAc                                                                           >  1:3807055/1‑93 (MQ=255)

                aGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAAccc                                                                         <  2:4572352/93‑1 (MQ=255)

                 gCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCa                                                                        >  1:7589623/1‑93 (MQ=255)

                  ccGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCAc                                                                       <  2:5285086/93‑1 (MQ=255)

                    gCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCg                                                                     >  1:5206094/1‑93 (MQ=255)

                     cATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCgt                                                                    <  2:5962535/93‑1 (MQ=255)

                      aTAAACGGCATCTGGAAGGTTTATTTACTGCCGGAGAGGAGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCgtg                                                                   >  2:1389454/1‑93 (MQ=255)

                      aTAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCgtg                                                                   <  2:5784905/93‑1 (MQ=255)

                       tAAACTGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCgtgt                                                                  >  1:3529245/1‑93 (MQ=255)

                         aaCGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCCGTGCGTTTATGATTTAACCCACCGTGTCa                                                                >  1:2655584/1‑93 (MQ=255)

                         aaCGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCa                                                                >  1:4736684/1‑93 (MQ=255)

                           cGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATg                                                              <  1:8159491/93‑1 (MQ=255)

                              cATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCt                                                           >  2:471901/1‑93 (MQ=255)

                               aTCTGGAAGTTGTATTTACTGCCGGAAAGGGGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTg                                                          <  2:6738129/93‑1 (MQ=255)

                               aTCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTg                                                          >  1:4534930/1‑93 (MQ=255)

                                tCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                         >  1:5941823/1‑93 (MQ=255)

                                tCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTAAACCCACCGTGTCATGCCTGa                                                         >  2:7124370/1‑93 (MQ=255)

                                 cTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTgct                                                        >  2:6812535/1‑91 (MQ=255)

                                   ggAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTg                                                      >  2:4024061/1‑93 (MQ=255)

                                    gAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTgg                                                     >  1:5626089/1‑93 (MQ=255)

                                    gAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTgg                                                     >  2:7792568/1‑93 (MQ=255)

                                     aaGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTggg                                                    >  1:4888684/1‑93 (MQ=255)

                                     aaGGTTTATTTACTGCCGGAAAGGTGAT‑GTGATTGAACCGCGCAACTTCCAGTGCGTTTATGATTTAAACCACCGTGTCATGCCTGCCTGGga                                                   >  1:3332603/1‑93 (MQ=255)

                                      aGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGga                                                   <  1:3857213/93‑1 (MQ=255)

                                      aGGTTTATTTACCGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGga                                                   >  1:2317114/1‑93 (MQ=255)

                                         tttatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgatga                                                <  2:2532190/93‑1 (MQ=255)

                                          ttatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgatgat                                               <  1:5655673/93‑1 (MQ=255)

                                           tatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGatgatg                                              >  2:1036846/1‑93 (MQ=255)

                                           tatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGatgatg                                              >  1:3291817/1‑93 (MQ=255)

                                           tatttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGatgatg                                              >  1:5267462/1‑93 (MQ=255)

                                             tttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAg                                            >  2:1007660/1‑93 (MQ=255)

                                             tttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAg                                            <  1:1933084/93‑1 (MQ=255)

                                             tttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAg                                            <  1:2511330/93‑1 (MQ=255)

                                              ttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTATCCCACCGTGTCATGCCTGACTGGGATGATGAgc                                           >  1:8481293/1‑93 (MQ=255)

                                              ttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAgc                                           >  1:7715254/1‑93 (MQ=255)

                                              ttaCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAgc                                           <  2:6870403/93‑1 (MQ=255)

                                               taCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAgcg                                          >  2:4424865/1‑93 (MQ=255)

                                               taCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAgcg                                          >  1:7849611/1‑93 (MQ=255)

                                                aCTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAgcgc                                         <  2:3190666/93‑1 (MQ=255)

                                                 cTGCCGGAAAGGTGATGGTGATTGAACGGCTCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGcgcg                                        <  1:6309280/93‑1 (MQ=255)

                                                    ccGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtc                                     >  2:1675685/1‑93 (MQ=255)

                                                    ccGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtc                                     <  2:5030391/93‑1 (MQ=255)

                                                     cGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtct                                    >  1:670800/1‑93 (MQ=255)

                                                      ggAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGAtctc                                   >  2:1957390/1‑93 (MQ=255)

                                                       gAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCg                                  >  1:1474308/1‑93 (MQ=255)

                                                       gAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCg                                  >  2:2269216/1‑93 (MQ=255)

                                                       gAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCg                                  <  2:7085159/93‑1 (MQ=255)

                                                        aaaGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGt                                 >  2:5143257/1‑93 (MQ=255)

                                                          aGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGttt                               <  1:2497341/93‑1 (MQ=255)

                                                          aGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGttt                               <  2:3849340/93‑1 (MQ=255)

                                                          aGGTGATGGTGATTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGttt                               >  2:1838864/1‑93 (MQ=255)

                                                           ggtgatggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTc                              >  2:3653009/1‑93 (MQ=255)

                                                           ggtgatggtgatTGAACGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTc                              <  1:7101813/93‑1 (MQ=255)

                                                            gtgatggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCg                             >  1:7208095/1‑93 (MQ=255)

                                                            gtgatggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCg                             >  2:4958085/1‑93 (MQ=255)

                                                             tgatggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGc                            >  2:8055976/1‑93 (MQ=255)

                                                             tgatggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGc                            <  2:8407537/93‑1 (MQ=255)

                                                              gatggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCa                           >  2:356713/1‑93 (MQ=255)

                                                              gatggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCa                           <  2:263721/93‑1 (MQ=255)

                                                                tggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCaaa                         >  1:1380560/1‑93 (MQ=255)

                                                                tggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCaaa                         >  1:2032664/1‑93 (MQ=255)

                                                                tggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCaaa                         <  2:6296785/93‑1 (MQ=255)

                                                                 ggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAAc                        >  2:5872454/1‑93 (MQ=255)

                                                                 ggtgatTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAAc                        <  1:5717510/93‑1 (MQ=255)

                                                                     atTGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGaa                    >  2:8552807/1‑93 (MQ=255)

                                                                      ttGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAg                   <  1:1006201/93‑1 (MQ=255)

                                                                       tGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGc                  <  1:1786600/93‑1 (MQ=255)

                                                                       tGAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGc                  <  1:6102787/93‑1 (MQ=255)

                                                                        gAACGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCa                 <  2:3876655/93‑1 (MQ=255)

                                                                          aCGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGa               <  2:7061394/93‑1 (MQ=255)

                                                                           cGGCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGaa              <  1:3925362/93‑1 (MQ=255)

                                                                           cGGCGCAACTGCCATTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGaa              <  2:6676304/93‑1 (MQ=255)

                                                                            ggCGCAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGaaa             >  2:3021588/1‑93 (MQ=255)

                                                                               gcAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatca          <  1:6518715/93‑1 (MQ=255)

                                                                                cAACTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatcat         <  1:4311775/93‑1 (MQ=255)

                                                                                 aaCTTCCAGTGCGTTTATGATTTCACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatcagc        >  2:8217729/1‑91 (MQ=255)

                                                                                 aaCTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatcatc        <  1:1697027/93‑1 (MQ=255)

                                                                                 aaCTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatcatc        <  1:1164074/93‑1 (MQ=255)

                                                                                 aaCTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatcatc        <  1:2082404/93‑1 (MQ=255)

                                                                                 aaCTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatcatc        >  1:8327724/1‑93 (MQ=255)

                                                                                 aaCTTCCAGTGCGTTTATGATTGAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatcatc        <  2:1806964/93‑1 (MQ=255)

                                                                                   cTTCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATcatcat      <  2:2372675/93‑1 (MQ=255)

                                                                                    ttCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATg     >  1:6427739/1‑93 (MQ=255)

                                                                                     tCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGc    <  2:7470999/93‑1 (MQ=255)

                                                                                     tCCAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGc    <  1:3155148/93‑1 (MQ=255)

                                                                                      ccAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCt   >  2:2771534/1‑93 (MQ=255)

                                                                                       cAGTGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTg  >  1:5416418/1‑93 (MQ=255)

GGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTG  >  NC_000913/969068‑969247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`