| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,548 | 1 bp→GG | intergenic (‑117/‑744) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,547 | 1 | . | G | 92.5% | 1230.7 / 87.5 | 387 | intergenic (‑116/‑745) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (16/13); new base G (173/184); total (189/198) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.13e-03 | |||||||||||
| * | NC_000913 | 3,957,548 | 0 | T | G | 99.5% | 1327.5 / ‑5.5 | 387 | intergenic (‑117/‑744) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base G (189/196); total (189/198) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.58e-01 | |||||||||||
Only 100 of 398 total aligned reads displayed.
AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑G‑‑C‑TCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957471‑3957627 ||| aGCATGTTCCGCAGATGCTAACGTAATGGTCAGTCAGAGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGT‑ccc < 2:4130043/93‑2 (MQ=255)aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGT‑ccc < 2:4340237/93‑2 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGT‑ccct > 1:8051371/1‑91 (MQ=255) cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGT‑ccctc > 1:596713/1‑90 (MQ=255) aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGT‑ccctca > 2:1578080/1‑89 (MQ=255) gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATTTGGTCAAATTCCGGAAAAT‑CC‑G‑GGCC‑TCGCAGGTCCCTCAAg > 1:7511090/1‑93 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAgg < 2:7552567/93‑1 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAgg > 1:4575869/1‑93 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAggg < 1:669366/93‑1 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAggg < 1:5545829/93‑1 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAG‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAggg < 1:8379014/93‑1 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAggggg > 2:5430005/1‑92 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGga < 1:5270592/93‑1 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGga < 2:5241092/93‑1 (MQ=255) cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGGCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGgaga > 1:4038440/1‑93 (MQ=255) cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGCAAATACG‑G‑G‑‑CTTCGCAGGTCCCTCAAGGGgaga > 1:3171142/1‑93 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGaa < 1:3895309/93‑1 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGaa < 1:8657198/93‑1 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGAGAGaa > 2:3465376/1‑93 (MQ=255) aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGaaaa > 2:6295246/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGGGAAAAc > 1:2226918/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACt < 2:3668587/93‑1 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACt > 1:7424955/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACtt > 1:2396789/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACtt > 1:4219559/1‑93 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTa < 2:6143838/93‑1 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTa > 1:3261218/1‑93 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAg < 1:5898310/93‑1 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGACCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAg > 2:8254528/1‑93 (MQ=255) cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAggg > 2:5057567/1‑93 (MQ=255) cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCAG‑G‑‑CTTCGCAGGTCCCTCAAGGTGAGAAAACTTAggg < 2:7044101/93‑1 (MQ=255) aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCct > 2:2549192/1‑93 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctc > 2:3423278/1‑93 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctc > 1:8585381/1‑93 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctct < 1:6319136/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:2191468/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt < 1:1474198/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt < 2:8787827/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGTCCTCTATg > 2:6689247/1‑93 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 2:2923238/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGGACATATATGGCAAAAGACCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg > 1:8258940/1‑93 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 1:1013926/93‑1 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 1:3741608/93‑1 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 2:3221729/93‑1 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 2:1985048/93‑1 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg > 1:966533/1‑93 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 1:6444135/93‑1 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc > 2:2353542/1‑93 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc > 1:1283852/1‑93 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 2:6455451/93‑1 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc > 1:7220846/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt < 1:2066997/93‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 2:1925531/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAAGCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 1:1125461/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc < 1:7003843/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:8753836/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc < 1:5730934/93‑1 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 1:476068/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGAAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 1:6239795/1‑93 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa > 1:5019255/1‑93 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt > 2:5670547/1‑93 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt > 1:679976/1‑93 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc > 1:364568/1‑93 (MQ=255) ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 1:5452531/93‑1 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt > 1:5361164/1‑93 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt > 1:3447248/1‑93 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt < 2:4567969/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa > 2:7323116/1‑93 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:8126945/93‑1 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc > 2:474864/1‑93 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc > 2:2657077/1‑93 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAAT‑CC‑G‑GGCC‑TTGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 1:2866161/93‑1 (MQ=255) agatatagGGCAAAAGCCCGGAAAAG‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGATACAAAGTCATTATCgg < 2:1330915/91‑1 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAtgtg > 1:7404719/1‑90 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg > 2:7889280/1‑93 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 1:1773173/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg < 1:8446559/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg > 2:1667743/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg < 1:6750624/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 2:1832894/1‑93 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa < 1:2591667/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTAATTATCGGGGa < 2:3893719/93‑1 (MQ=255) atatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt > 2:229147/1‑93 (MQ=255) tatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg < 2:1263398/93‑1 (MQ=255) atGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg > 2:6761024/1‑93 (MQ=255) tGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 1:4631334/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 2:592767/93‑1 (MQ=255) gCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta > 2:855583/1‑93 (MQ=255) cAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat < 1:5209838/93‑1 (MQ=255) cAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat < 2:7757327/93‑1 (MQ=255) aaaaGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 2:1086230/1‑93 (MQ=255) aaGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt > 1:3050967/1‑93 (MQ=255) aaGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt < 1:6111305/93‑1 (MQ=255) aGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta > 2:5782984/1‑93 (MQ=255) gCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 1:1907403/1‑93 (MQ=255) gCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 1:2737125/1‑93 (MQ=255) cccGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt > 2:3537218/1‑93 (MQ=255) cccGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 1:76939/93‑1 (MQ=255) cccGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 1:4416062/93‑1 (MQ=255) cccGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt > 1:7820558/1‑93 (MQ=255) ||| AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑G‑‑C‑TCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957471‑3957627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |