BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,194,577	2 bp→GC	coding (97‑98/774 nt)	yjaD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,194,577	0	C	G	100.0%	615.1 / NA	180	R33A (CGG→GCG)	yjaD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (61/119); total (61/119)
*	NC_000913	4,194,578	0	G	C	100.0%	608.2 / NA	179	R33A (CGG→GCG)	yjaD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (60/119); total (60/119)

Only 100 of 185 total aligned reads displayed.

TAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAACGGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGC  >  NC_000913/4194491‑4194664

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taATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCaa                                                                                   >  2:5754725/1‑93 (MQ=255)

  aTTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAAt                                                                                 <  2:1237343/93‑1 (MQ=255)

  aTTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAAt                                                                                 <  1:2945611/93‑1 (MQ=255)

  aTTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAAt                                                                                 >  1:4680419/1‑93 (MQ=255)

   ttGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAAtt                                                                                <  2:6114659/93‑1 (MQ=255)

   atGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCTAAGCGGCAAAtt                                                                                <  1:2089240/92‑1 (MQ=255)

     gAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTc                                                                              <  1:5250136/93‑1 (MQ=255)

     gAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTc                                                                              <  2:5529558/93‑1 (MQ=255)

     gAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTc                                                                              <  2:342816/93‑1 (MQ=255)

     gAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTc                                                                              <  1:5950342/93‑1 (MQ=255)

     gAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTc                                                                              <  1:5950343/93‑1 (MQ=255)

     gAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTc                                                                              >  1:8029504/1‑93 (MQ=255)

        aaaTTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGAt                                                                           >  1:644421/1‑93 (MQ=255)

          aTTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCt                                                                         <  2:621492/93‑1 (MQ=255)

             aGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgt                                                                      <  2:4723512/93‑1 (MQ=255)

             aGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgt                                                                      >  2:1706706/1‑93 (MQ=255)

             aGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgt                                                                      <  2:4263224/93‑1 (MQ=255)

             aGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgt                                                                      >  2:4850551/1‑93 (MQ=255)

             aGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgt                                                                      <  1:781742/93‑1 (MQ=255)

             aGATCACGGCTGGTGGGCCATCAGCCATGAACAAACATTATCTGTGCCGCAGCGAGAACTGCCATGTGGCGAAGCGGTAAATTTTGATCttcg                                                                      >  2:5360256/1‑91 (MQ=255)

             aGATCACGGCGGGTGGGACGTCAGCCATGAATAATATTTATGGTTGGCGAAGGGAGAATTGCCATAGGGCGAAGCGGCAAATTGCGATCTtgt                                                                      <  2:962355/93‑1 (MQ=255)

              gATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgtg                                                                     <  2:1505689/93‑1 (MQ=255)

              gATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTtgtg                                                                     <  2:4266629/93‑1 (MQ=255)

               aTCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTgg                                                                    <  2:3085637/93‑1 (MQ=255)

               aTCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTgg                                                                    <  2:7377451/93‑1 (MQ=255)

                  aCGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTc                                                                 <  1:5026590/93‑1 (MQ=255)

                    ggCTGGTTGGTCGTCACCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTCTGGGTCAg                                                               <  2:7855782/93‑1 (MQ=255)

                    ggCTGGTGGGTCGTCAGCCATCAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTTGATCTTGTGTGTctg                                                               >  2:7741292/1‑91 (MQ=255)

                     gCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAgc                                                              >  2:8773085/1‑93 (MQ=255)

                       cggttgGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAgcgc                                                            <  1:4452506/92‑1 (MQ=255)

                        ggtggGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAgcgcg                                                           >  2:7487616/1‑93 (MQ=255)

                        ggtggGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAgcgcg                                                           >  2:1745256/1‑93 (MQ=255)

                          tggGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCa                                                         <  1:2493040/93‑1 (MQ=255)

                          tggGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCa                                                         >  2:8178290/1‑93 (MQ=255)

                             gtcgtcAGCCATGAACAAAAATTATGGTTGGCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTTGATCTTGTGGGTCAGCGCGCACTa                                                      <  1:2288313/93‑1 (MQ=255)

                             gtcgtcAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTa                                                      <  1:7747496/93‑1 (MQ=255)

                              tcgtcAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTAc                                                     <  2:2259592/93‑1 (MQ=255)

                              tcgtcAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTAc                                                     <  2:6397416/93‑1 (MQ=255)

                                 tcAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACaaa                                                  <  1:5773136/93‑1 (MQ=255)

                                 tcAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACaaa                                                  <  1:1701173/93‑1 (MQ=255)

                                  cAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAAt                                                 <  1:2108088/93‑1 (MQ=255)

                                   aGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATc                                                <  1:1920831/93‑1 (MQ=255)

                                   aGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTGCGATCTTGTGGGTCAGCGCGCACTACAAATc                                                <  2:1788683/93‑1 (MQ=255)

                                    gCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCg                                               >  1:3018727/1‑93 (MQ=255)

                                    gCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCg                                               >  1:4877943/1‑93 (MQ=255)

                                     ccATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCgg                                              <  2:3931926/93‑1 (MQ=255)

                                      cATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGc                                             <  1:113024/93‑1 (MQ=255)

                                      cATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGc                                             >  1:135678/1‑93 (MQ=255)

                                      cATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGc                                             >  1:1548162/1‑93 (MQ=255)

                                       aTGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCg                                            >  1:42772/1‑93 (MQ=255)

                                       aTGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCg                                            <  2:8339513/93‑1 (MQ=255)

                                       aTGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCg                                            >  2:1685640/1‑93 (MQ=255)

                                       aTGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCCCACTACAAATCGGCg                                            >  1:3688109/1‑93 (MQ=255)

                                        tGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGa                                           >  1:4090178/1‑93 (MQ=255)

                                        tGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGa                                           <  2:6329702/93‑1 (MQ=255)

                                        tGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGa                                           >  1:1952435/1‑93 (MQ=255)

                                         gAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGaa                                          <  1:8450780/93‑1 (MQ=255)

                                         gAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGaa                                          >  1:3422353/1‑93 (MQ=255)

                                         gAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGaa                                          <  1:966756/93‑1 (MQ=255)

                                           aCAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATg                                        <  1:4289270/93‑1 (MQ=255)

                                           aCAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATg                                        >  1:7795873/1‑93 (MQ=255)

                                           aCAAAAATTATGGTTGCCGAAGGGAGAATAGCCATATGGCGAAGCGGCAAAATTCGATCTTGTGGGTCAGCGCGCACAACAAATCGGCGCATg                                        >  1:7795872/1‑93 (MQ=255)

                                              aaaaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCa                                     <  2:8420499/93‑1 (MQ=255)

                                                aaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAgg                                   <  2:5153897/93‑1 (MQ=255)

                                                aaTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAgg                                   <  2:3775542/93‑1 (MQ=255)

                                                 aTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAggg                                  <  2:6544527/93‑1 (MQ=255)

                                                 aTTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAggg                                  >  1:1058934/1‑93 (MQ=255)

                                                   tATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAggggg                                <  2:2826854/93‑1 (MQ=255)

                                                    aTGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGGGCACTACAAATCGGCGAATGGCAGGGGGa                               >  1:3114133/1‑93 (MQ=255)

                                                         tGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTg                          <  2:7320109/93‑1 (MQ=255)

                                                           gcGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGtt                        <  2:6811830/92‑1 (MQ=255)

                                                           ccGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGtt                        <  1:2599474/93‑1 (MQ=255)

                                                            cGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGttt                       >  2:3216681/1‑93 (MQ=255)

                                                             gAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTg                      <  1:2334981/93‑1 (MQ=255)

                                                             gAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTg                      <  1:5581763/93‑1 (MQ=255)

                                                              aaGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGANTGGCAGGGGGACGCTGGTTgg                     >  1:6967207/1‑93 (MQ=255)

                                                              aaGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTgg                     >  2:7312149/1‑93 (MQ=255)

                                                               aGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGt                    <  2:6149244/93‑1 (MQ=255)

                                                                gggAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGtt                   <  2:350298/93‑1 (MQ=255)

                                                                 ggAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTa                  >  2:985468/1‑93 (MQ=255)

                                                                 ggAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTa                  <  2:8078722/93‑1 (MQ=255)

                                                                 ggAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTa                  <  1:7921733/93‑1 (MQ=255)

                                                                 ggAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTa                  >  1:8681463/1‑93 (MQ=255)

                                                                  gagaATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAg                 >  1:5124565/1‑93 (MQ=255)

                                                                    gaATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTa               >  1:5129100/1‑93 (MQ=255)

                                                                    gaATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTa               <  1:3139984/93‑1 (MQ=255)

                                                                       ttGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTacaa            <  2:2708121/93‑1 (MQ=255)

                                                                        tGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTTGTTAGTacaac           <  1:8669746/93‑1 (MQ=255)

                                                                        tGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTacaac           <  1:3206615/93‑1 (MQ=255)

                                                                        tGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTacaac           <  1:8248861/93‑1 (MQ=255)

                                                                         tccATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTacaaca          <  1:5487473/92‑1 (MQ=255)

                                                                         gCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTTGTTAGTacaaca          >  1:322491/1‑93 (MQ=255)

                                                                         gCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTacaaca          >  1:4394290/1‑93 (MQ=255)

                                                                          ccATATGGCGTAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACATATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTATAAcag         >  2:7792699/1‑93 (MQ=255)

                                                                          ccATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcag         <  1:3027018/93‑1 (MQ=255)

                                                                           cATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcagc        <  1:5715539/93‑1 (MQ=255)

                                                                           cATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcagc        <  1:7427692/93‑1 (MQ=255)

                                                                            atatGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcagca       >  1:3551408/1‑93 (MQ=255)

                                                                             tatGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAAcagcag      <  1:2543605/93‑1 (MQ=255)

                                                                                ggCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAgcgg   <  1:1834691/93‑1 (MQ=255)

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TAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAACGGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGC  >  NC_000913/4194491‑4194664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`