BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,743,603	Δ1 bp	coding (1171/1275 nt)	yiaN →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,743,603	0	C	.	100.0%	1036.6 / NA	219	coding (1171/1275 nt)	yiaN	putative membrane protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (92/127); total (92/127)

Only 100 of 221 total aligned reads displayed.

TATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTC  >  NC_000913/3743515‑3743690

tATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGc                                                                                    <  2:2450776/93‑1 (MQ=255)

tATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGc                                                                                    >  2:6260053/1‑93 (MQ=255)

tATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGc                                                                                    <  2:6094024/93‑1 (MQ=255)

tATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGACAAAACTCAAATTCGAT‑GATGc                                                                                    <  1:5671444/93‑1 (MQ=255)

tATCATTAACTGCTCAACCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGc                                                                                    <  1:5344159/93‑1 (MQ=255)

 aTCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCa                                                                                   >  2:328271/1‑93 (MQ=255)

  tCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAg                                                                                  <  1:4764954/93‑1 (MQ=255)

     ttAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCa                                                                               <  1:6403534/93‑1 (MQ=255)

     ttAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCa                                                                               <  1:2943381/93‑1 (MQ=255)

       aaCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCaga                                                                             >  1:5264821/1‑93 (MQ=255)

       aaCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCaga                                                                             <  2:5291383/93‑1 (MQ=255)

        aCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCagag                                                                            >  2:1718305/1‑93 (MQ=255)

          tGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGc                                                                          <  1:1047384/93‑1 (MQ=255)

          tGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGc                                                                          <  2:1984658/93‑1 (MQ=255)

            cTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGt                                                                        >  1:3749257/1‑93 (MQ=255)

             tCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGtt                                                                       >  1:174792/1‑93 (MQ=255)

             tCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGtt                                                                       <  2:2332028/93‑1 (MQ=255)

              cAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGttt                                                                      >  2:5698864/1‑93 (MQ=255)

              cAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGttt                                                                      >  2:2984000/1‑93 (MQ=255)

              cAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGttt                                                                      <  2:3347072/93‑1 (MQ=255)

               aaTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGtttt                                                                     >  1:3055041/1‑93 (MQ=255)

               aaTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGtttt                                                                     <  1:3525385/93‑1 (MQ=255)

               aaTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGtttt                                                                     <  1:4190812/93‑1 (MQ=255)

                aTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTTTTTCAGGGGGGGCAAAATTCAAATTCGAT‑GATGCAGCCAAAGGGGTTTTc                                                                    >  2:1168043/1‑93 (MQ=255)

                aTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTc                                                                    >  2:4539425/1‑93 (MQ=255)

                  cGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTccc                                                                  <  2:6435997/93‑1 (MQ=255)

                  cGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTccc                                                                  <  1:2998151/93‑1 (MQ=255)

                  cGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTccc                                                                  <  1:5649516/93‑1 (MQ=255)

                  cGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTccc                                                                  <  1:4231224/93‑1 (MQ=255)

                   tgCTTAATTGCACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCt                                                                 <  2:2537890/92‑1 (MQ=255)

                   ggCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCt                                                                 <  1:1675316/93‑1 (MQ=255)

                     cTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTa                                                               >  1:4441393/1‑93 (MQ=255)

                     cTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTa                                                               >  2:4707848/1‑93 (MQ=255)

                       tAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACg                                                             <  1:1225561/93‑1 (MQ=255)

                       tAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACg                                                             >  2:2613905/1‑93 (MQ=255)

                          ttACACAGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGCGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTcc                                                          >  2:5525999/1‑93 (MQ=255)

                           tACACCGCCTATCTGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCt                                                         <  2:870741/93‑1 (MQ=255)

                           tACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCt                                                         <  1:5593158/93‑1 (MQ=255)

                             cacCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTgg                                                       >  2:4223195/1‑93 (MQ=255)

                              cccGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGt                                                      <  1:668926/92‑1 (MQ=255)

                              acCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGt                                                      >  1:866360/1‑93 (MQ=255)

                                cGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGttt                                                    <  2:6458489/93‑1 (MQ=255)

                                 gCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGtttt                                                   <  1:1657701/93‑1 (MQ=255)

                                  ccTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTta                                                  <  1:2207790/93‑1 (MQ=255)

                                   cTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtat                                                 <  1:4480627/93‑1 (MQ=255)

                                   cTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtat                                                 >  1:6217037/1‑93 (MQ=255)

                                    tATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtatt                                                >  1:4789745/1‑92 (MQ=255)

                                    tATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtata                                                >  1:1782182/1‑93 (MQ=255)

                                    tATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtata                                                >  2:3523751/1‑93 (MQ=255)

                                       cGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTc                                             <  1:1804544/93‑1 (MQ=255)

                                       cGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTc                                             >  2:819814/1‑93 (MQ=255)

                                        ggTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCa                                            <  2:598982/93‑1 (MQ=255)

                                        ggTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCATACGTCCTGGTTTTATATTct                                            >  2:68737/1‑92 (MQ=255)

                                         gTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCat                                           <  1:1178668/93‑1 (MQ=255)

                                         gTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCat                                           <  2:188510/93‑1 (MQ=255)

                                         gTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCat                                           <  1:5081050/93‑1 (MQ=255)

                                          tAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCatt                                          <  1:4137699/93‑1 (MQ=255)

                                          tAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCatt                                          <  1:3596635/93‑1 (MQ=255)

                                             tGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCattatt                                       <  1:4683459/93‑1 (MQ=255)

                                             tGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCattatt                                       >  2:1635272/1‑93 (MQ=255)

                                                aCTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGt                                    >  2:4983968/1‑93 (MQ=255)

                                                 cTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTc                                   >  2:2705590/1‑93 (MQ=255)

                                                   tAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGt                                 >  2:2151098/1‑93 (MQ=255)

                                                     aCGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAt                               >  2:3465643/1‑93 (MQ=255)

                                                      cGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAtt                              <  1:2753099/93‑1 (MQ=255)

                                                      cGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAtt                              <  2:141839/93‑1 (MQ=255)

                                                      cGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAtt                              <  2:3871260/93‑1 (MQ=255)

                                                       gTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAttt                             >  2:2080522/1‑93 (MQ=255)

                                                       gTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAttt                             <  1:5812264/93‑1 (MQ=255)

                                                        ttATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCTTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTg                            <  2:526837/93‑1 (MQ=255)

                                                        ttATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTg                            <  1:2919173/93‑1 (MQ=255)

                                                        ttATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTg                            >  1:409019/1‑93 (MQ=255)

                                                         tATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGt                           <  2:1226252/93‑1 (MQ=255)

                                                         tATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGt                           <  2:4092288/93‑1 (MQ=255)

                                                         tATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGt                           >  2:3904098/1‑93 (MQ=255)

                                                          aTTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGtt                          <  2:6270299/93‑1 (MQ=255)

                                                           tttCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGttt                         <  1:158036/93‑1 (MQ=255)

                                                               aGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAt                     <  1:5205368/93‑1 (MQ=255)

                                                               aGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAt                     >  2:5366989/1‑93 (MQ=255)

                                                                 gggTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTc                   <  1:207059/93‑1 (MQ=255)

                                                                 gggTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTc                   <  2:1694182/93‑1 (MQ=255)

                                                                   gTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTccc                 >  1:3713999/1‑93 (MQ=255)

                                                                    tGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCg                <  1:5528350/93‑1 (MQ=255)

                                                                     ggCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGa               <  1:4328151/93‑1 (MQ=255)

                                                                      gCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAt              >  2:1390405/1‑93 (MQ=255)

                                                                       cAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAtc             >  2:1082683/1‑93 (MQ=255)

                                                                         aaaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAtctc           >  2:367367/1‑93 (MQ=255)

                                                                         aaaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAtctc           >  2:1076815/1‑93 (MQ=255)

                                                                         aaaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAtctc           <  2:5152099/93‑1 (MQ=255)

                                                                         aaaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAtctc           >  2:4757077/1‑93 (MQ=255)

                                                                          aaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCTCGATCtca          >  1:3356147/1‑93 (MQ=255)

                                                                          aaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtca          >  1:1320743/1‑93 (MQ=255)

                                                                          aaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtca          >  1:1860983/1‑93 (MQ=255)

                                                                           aCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcat         <  1:2720557/93‑1 (MQ=255)

                                                                           aCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcat         <  1:4713321/93‑1 (MQ=255)

                                                                             tCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcatca       <  1:2830950/93‑1 (MQ=255)

                                                                             tCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcatca       >  1:2462300/1‑93 (MQ=255)

                                                                             tCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcatca       <  1:2311498/93‑1 (MQ=255)

                                                                                aaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcc    >  1:3866660/1‑93 (MQ=255)

                                                                                 aTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcct   <  1:6386894/93‑1 (MQ=255)

TATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTC  >  NC_000913/3743515‑3743690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`