BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,093,303	+G	coding (187/705 nt)	yggS →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,093,299	1	.	G	99.1%	794.7 / ‑1.5	228	coding (183/705 nt)	yggS	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/2); new base G (102/124); total (102/126)
Fisher's exact test for biased strand distribution p-value = 5.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 266 total aligned reads displayed.

CTGCTTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑GGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCTAATAAAAGC  >  NC_000913/3093207‑3093386

ctgttTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGaa                                                                                           >  2:1978603/1‑93 (MQ=255)

 tgctTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑g                                                                                         <  2:3950458/93‑1 (MQ=255)

  gctTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑gg                                                                                        <  2:895753/93‑1 (MQ=255)

  gctTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑gg                                                                                        <  2:5322369/93‑1 (MQ=255)

   ctTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg                                                                                       <  2:4224478/93‑1 (MQ=255)

   ctTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg                                                                                       <  1:5710589/93‑1 (MQ=255)

   ctTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg                                                                                       <  1:2239416/93‑1 (MQ=255)

    ttGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑g                                                                                     <  2:4066358/93‑1 (MQ=255)

    ttGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑g                                                                                     >  1:164644/1‑93 (MQ=255)

    ttGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑g                                                                                     <  1:332540/93‑1 (MQ=255)

     tGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑gg                                                                                    >  1:1337941/1‑92 (MQ=255)

     tGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑gg                                                                                    <  2:4253292/93‑2 (MQ=255)

     tGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑gg                                                                                    <  1:5926050/93‑2 (MQ=255)

      gCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑ggt                                                                                   <  1:3951529/93‑3 (MQ=255)

       cagtcagtAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑ggta                                                                                  >  1:1496487/1‑90 (MQ=255)

        agtcagtAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑ggtag                                                                                 >  2:5357737/1‑89 (MQ=255)

        agtcagtAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑ggtag                                                                                 >  1:4454685/1‑89 (MQ=255)

        agtcagtAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑ggg‑ggtag                                                                                 >  1:3271421/1‑89 (MQ=255)

           cagtAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATa                                                                               >  2:139667/1‑93 (MQ=255)

              tAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATaaaa                                                                            <  1:1810867/93‑1 (MQ=255)

               aaaacaaaacCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAAt                                                                           >  1:5389986/1‑93 (MQ=255)

                 aacaaaccCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTc                                                                         <  2:2278247/93‑1 (MQ=255)

                   caaaacCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGc                                                                       <  1:2412264/93‑1 (MQ=255)

                    aaaacCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGcc                                                                      >  2:6409370/1‑93 (MQ=255)

                    aaaacCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGcc                                                                      >  2:5619889/1‑93 (MQ=255)

                     aaacCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCa                                                                     >  2:3617194/1‑93 (MQ=255)

                     aaacCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCa                                                                     >  1:1235741/1‑93 (MQ=255)

                      aacCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCAc                                                                    <  2:1614309/93‑1 (MQ=255)

                       acCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACt                                                                   <  1:2657823/93‑1 (MQ=255)

                        ccTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACtt                                                                  <  1:5842858/93‑1 (MQ=255)

                        ccTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACtt                                                                  <  2:5427381/93‑1 (MQ=255)

                         cTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACttt                                                                 >  1:5293782/1‑93 (MQ=255)

                         cTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACttt                                                                 >  1:5621713/1‑93 (MQ=255)

                           gCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCa                                                               <  1:1763228/93‑1 (MQ=255)

                            cGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAg                                                              <  1:213104/93‑1 (MQ=255)

                             gAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAgg                                                             <  1:4829123/93‑1 (MQ=255)

                              aGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGa                                                            >  2:5089587/1‑93 (MQ=255)

                                cgcCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAAc                                                          <  2:5667639/93‑1 (MQ=255)

                                 gcCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACt                                                         <  2:2221367/93‑1 (MQ=255)

                                  ccATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTg                                                        <  2:5780692/93‑1 (MQ=255)

                                  ccATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTg                                                        <  2:1829749/93‑1 (MQ=255)

                                  caagcGCAGAAGCCATTGATGCCGGGCAGCGTCAATTGGTTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTg                                                        <  2:21357/89‑1 (MQ=255)

                                   cATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTgg                                                       <  1:3262742/93‑1 (MQ=255)

                                   cATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTgg                                                       <  1:2713111/93‑1 (MQ=255)

                                     tCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGc                                                     >  2:1670335/1‑93 (MQ=255)

                                      cGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCg                                                    >  2:2745367/1‑93 (MQ=255)

                                        cAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTa                                                  >  1:5524309/1‑93 (MQ=255)

                                        cAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTa                                                  >  1:4562810/1‑93 (MQ=255)

                                          gAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAAc                                                >  2:1867141/1‑93 (MQ=255)

                                           aaGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACa                                               <  1:4307376/93‑1 (MQ=255)

                                           aaGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACa                                               <  2:836001/93‑1 (MQ=255)

                                            aGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAg                                              >  2:1371961/1‑93 (MQ=255)

                                             gCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAgg                                             >  1:995650/1‑93 (MQ=255)

                                               cATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGAt                                           >  1:4319986/1‑93 (MQ=255)

                                                aTTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGAtt                                          >  1:4213864/1‑93 (MQ=255)

                                                 ttGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTa                                         <  1:1934386/93‑1 (MQ=255)

                                                 ttGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTa                                         >  2:2531380/1‑93 (MQ=255)

                                                    aTGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGaa                                      >  1:2066563/1‑93 (MQ=255)

                                                    aTGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGaa                                      >  2:1309335/1‑93 (MQ=255)

                                                       ccGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATgg                                   <  1:2588520/93‑1 (MQ=255)

                                                       ccGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATgg                                   <  1:3086794/93‑1 (MQ=255)

                                                        cGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGc                                  <  2:6067593/93‑1 (MQ=255)

                                                         gggCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCa                                 <  2:3858100/93‑1 (MQ=255)

                                                          ggCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCAt                                <  2:1634643/93‑1 (MQ=255)

                                                          ggCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCAt                                <  2:3446686/93‑1 (MQ=255)

                                                             aGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCAtttt                             <  1:4521482/93‑1 (MQ=255)

                                                               cGTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTAt                           <  2:5866563/93‑1 (MQ=255)

                                                                gTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGTCATTTTAtt                          <  2:4990637/93‑1 (MQ=255)

                                                                gTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTAtt                          >  2:3809/1‑93 (MQ=255)

                                                                gTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTAtt                          >  1:5306556/1‑93 (MQ=255)

                                                                gTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTAtt                          <  2:1160002/93‑1 (MQ=255)

                                                                gTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTAtt                          >  2:2839/1‑93 (MQ=255)

                                                                gTCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTAtt                          <  2:251100/93‑1 (MQ=255)

                                                                 tCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTg                         >  2:1487786/1‑93 (MQ=255)

                                                                 tCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTg                         >  1:3876783/1‑93 (MQ=255)

                                                                 tCAATTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTg                         <  1:2316854/93‑1 (MQ=255)

                                                                   aaTTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGc                       <  2:4626259/93‑1 (MQ=255)

                                                                    aTTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGcc                      <  2:2969556/93‑1 (MQ=255)

                                                                    aTTTGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGcc                      <  1:5980504/93‑1 (MQ=255)

                                                                     tttGGTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGccc                     <  2:3004829/93‑1 (MQ=255)

                                                                     tttGGTGAAAACTACATACAGGAA‑GGGAGTAGATAAAATTCACCACTTTCAGGAACTGGGCGTAACAGAATTAGAATGGCATTTTATTGGccc                     <  1:6478031/93‑1 (MQ=255)

                                                                       tGGTGAAAACTACGTTCAGGAAGGGG‑GTAGGTAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGt                   <  1:4779054/93‑1 (MQ=255)

                                                                        ggTGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGtt                  <  2:4013742/93‑1 (MQ=255)

                                                                          tGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGc                >  1:1045574/1‑93 (MQ=255)

                                                                          tGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGc                <  1:5038067/93‑1 (MQ=255)

                                                                          tGAAAACTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGc                <  2:3767826/93‑1 (MQ=255)

                                                                            aaaaCTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAg              <  1:4642399/93‑1 (MQ=255)

                                                                             aaaCTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGt             >  2:5232015/1‑93 (MQ=255)

                                                                             aaaCTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGt             <  1:4797456/93‑1 (MQ=255)

                                                                               aCTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCt           <  1:6100066/93‑1 (MQ=255)

                                                                               aCTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCt           <  2:3387113/93‑1 (MQ=255)

                                                                                cTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCta          >  2:4709597/1‑93 (MQ=255)

                                                                                cTACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCta          >  1:3911535/1‑93 (MQ=255)

                                                                                 tACGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCtaa         >  1:6279235/1‑93 (MQ=255)

                                                                                  aCGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCtaat        >  2:4831419/1‑93 (MQ=255)

                                                                                  aCGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCtaat        >  1:522323/1‑93 (MQ=255)

                                                                                  aCGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCtaat        >  2:43200/1‑93 (MQ=255)

                                                                                  aCGTTCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCtaat        >  1:3686279/1‑93 (MQ=255)

                                                                                      tCAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCTAATaaaa    <  1:3523140/93‑1 (MQ=255)

                                                                                       cAGGAAGGGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCTAATAAAAg   <  2:765821/93‑1 (MQ=255)

CTGCTTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAA‑GGG‑GTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCTAATAAAAGC  >  NC_000913/3093207‑3093386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`