BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,375	+A	coding (458/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,372	1	.	A	100.0%	352.0 / NA	92	S152* (TCA→TAA)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (31/61); total (31/61)

Only 100 of 108 total aligned reads displayed.

GCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑C‑AAAGGCCATGCGCTGGAAG‑GC‑TGGCG‑‑‑‑A‑‑‑‑ACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCC  >  NC_000913/4008280‑4008449

gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGGTT‑c                                                                                               >  2:69989/1‑93 (MQ=255)

 cTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGATT‑C‑a                                                                                             >  1:2964203/1‑93 (MQ=255)

  tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGGGGTT‑C‑aa                                                                                            >  1:4770873/1‑93 (MQ=255)

   ggAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑C‑aaa                                                                                           >  2:4699657/1‑93 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑C‑taaa                                                                                          >  1:3882480/1‑92 (MQ=255)

      gCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑C‑aaaaag                                                                                        >  1:290171/1‑90 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑C‑aaaaggc                                                                                       <  1:2595345/93‑5 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑C‑aaaaggc                                                                                       <  2:1675155/93‑5 (MQ=255)

        aGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCC‑AAAgggc                                                                                       >  2:4649788/1‑91 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGGGTTT‑CAAAAGGCCa                                                                                      >  1:793768/1‑93 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCa                                                                                      <  2:3275365/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCa                                                                                      <  1:1740542/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCAt                                                                                     <  1:3699886/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCAt                                                                                     <  2:176001/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCAt                                                                                     <  2:1736421/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGGGATGGCGGGCGGGGTTT‑CAAAAGGCCAt                                                                                     >  2:1507027/1‑93 (MQ=255)

           cGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATg                                                                                    >  1:4155213/1‑93 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATgc                                                                                   >  2:3647428/1‑93 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATgc                                                                                   <  1:1323429/93‑1 (MQ=255)

             aTTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATgcg                                                                                  >  1:5802495/1‑93 (MQ=255)

             aTTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAAGCCATgcg                                                                                  >  1:1571847/1‑93 (MQ=255)

              ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATgcgc                                                                                 <  1:3096691/93‑1 (MQ=255)

              ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATgcgc                                                                                 <  1:4583736/93‑1 (MQ=255)

               tAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCt                                                                                <  1:6439145/93‑1 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTg                                                                               <  1:2630727/93‑1 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTg                                                                               <  2:2207035/93‑1 (MQ=255)

                 aCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTgg                                                                              <  2:3472704/93‑1 (MQ=255)

                  cGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGa                                                                             <  2:1268274/93‑1 (MQ=255)

                  cGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAAGCCATGCGCTGGa                                                                             >  2:1314607/1‑93 (MQ=255)

                  cGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAAGCCATGCGCTGGa                                                                             >  1:1170583/1‑93 (MQ=255)

                  cGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGGTT‑CAAAAAGCCATGCGCTGGa                                                                             >  1:4338389/1‑93 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTTGaa                                                                            >  2:6061488/1‑93 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGaa                                                                            <  2:6435321/93‑1 (MQ=255)

                    cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAg                                                                           <  2:3237564/93‑1 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgc                                                                          <  1:4450303/93‑2 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgc                                                                          <  2:5312058/93‑2 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgc                                                                          <  1:665885/93‑2 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgc                                                                          <  1:1938513/93‑2 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgcgg                                                                        >  1:2846952/1‑90 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgcgg                                                                        <  1:2544476/93‑4 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgcggt                                                                       <  2:2844229/93‑5 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgcggt                                                                       <  2:2095072/93‑5 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgcggt                                                                       <  1:5572441/93‑5 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgcggg                                                                       >  1:975712/1‑89 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAgcggg                                                                       >  2:1580045/1‑89 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGGTT‑CAAAAGGCCATGCGCTGGAAgcggg                                                                       >  2:2826432/1‑89 (MQ=255)

                             gCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑a                                                             <  2:1404079/93‑1 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑a‑‑‑‑a                                                        <  1:477398/93‑1 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑a‑‑‑‑a                                                        <  2:5007933/93‑1 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑a‑‑‑‑a                                                        <  1:2722700/93‑1 (MQ=255)

                               gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑a‑‑‑‑ag                                                       >  1:1750405/1‑92 (MQ=255)

                                aTCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGGTT‑CAAAAGGTCATGCGCTTGAAG‑GCGTGGCgcaga                                                              >  1:2318867/1‑89 (MQ=255)

                                 tCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑a‑‑‑‑agaa                                                     >  2:3486276/1‑90 (MQ=255)

                                  cgcgTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑a‑‑‑‑agaaa                                                    >  1:1260781/1‑89 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  2:3052296/93‑1 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        >  1:1148257/1‑93 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  1:5720128/93‑1 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  1:2423527/93‑1 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      <  2:2720365/93‑3 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      <  1:6351818/93‑3 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      <  1:5203346/93‑3 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      <  2:2612051/93‑3 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      >  1:5279004/1‑91 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      <  2:4945205/93‑3 (MQ=255)

                                                                     ggAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtttgg                     >  2:2368692/1‑90 (MQ=255)

                                                                     ggAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtttgg                     <  1:1390840/93‑4 (MQ=255)

                                                                      gAAGTGATGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑AAGAGACTGGGCTACAGCCTGAAGGATTGTATTGCGtttggg                    >  2:3799169/1‑89 (MQ=255)

                                                                      gAAGTGATGGCGGGCGGCGTCT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGtttggt                    <  2:2138944/93‑5 (MQ=255)

                                                                            aTGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg              <  1:4539782/93‑1 (MQ=255)

                                                                            aTGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg              <  2:3643840/93‑1 (MQ=255)

                                                                            aTGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg              >  1:4895227/1‑93 (MQ=255)

                                                                             tGGCGGGCGGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa             <  2:2652227/93‑1 (MQ=255)

                                                                              ggcgggcgGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt            <  2:1677885/93‑1 (MQ=255)

                                                                              ggcgggcgGCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt            <  1:1612030/93‑1 (MQ=255)

                                                                               gcgggcggCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg           <  2:4096718/93‑1 (MQ=255)

                                                                                cgggcggCGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGa          <  1:3726700/93‑1 (MQ=255)

                                                                                 gggcggCGTTT‑CAAAAGGGCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGaa         <  2:3318022/93‑1 (MQ=255)

                                                                                  ggcggcGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAac        >  2:4169501/1‑93 (MQ=255)

                                                                                  ggcggcGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAac        <  1:4668012/93‑1 (MQ=255)

                                                                                  ggcggcGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAac        >  2:1145412/1‑93 (MQ=255)

                                                                                  ggcggcGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAac        <  2:2472633/93‑1 (MQ=255)

                                                                                  ggcggcGTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAac        >  2:2412012/1‑93 (MQ=255)

                                                                                   gcggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacg       <  1:3946254/93‑1 (MQ=255)

                                                                                    cggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga      <  1:3061014/93‑1 (MQ=255)

                                                                                    cggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga      <  1:5029312/93‑1 (MQ=255)

                                                                                    cggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga      <  1:3733356/93‑1 (MQ=255)

                                                                                     ggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  1:1387788/93‑1 (MQ=255)

                                                                                     ggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     >  2:506903/1‑93 (MQ=255)

                                                                                     ggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  2:6002290/93‑1 (MQ=255)

                                                                                     ggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     >  1:838731/1‑93 (MQ=255)

                                                                                     ggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  2:6349720/93‑1 (MQ=255)

                                                                                     ggcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  1:2279083/93‑1 (MQ=255)

                                                                                      gcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgacg    <  1:1704662/93‑1 (MQ=255)

                                                                                      gcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgacg    >  1:550341/1‑93 (MQ=255)

                                                                                      gcgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgacg    >  1:1938896/1‑93 (MQ=255)

                                                                                       cgTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc   <  2:2284238/93‑1 (MQ=255)

                                                                                        gTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  <  2:3718784/93‑1 (MQ=255)

                                                                                        gTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  >  2:5795906/1‑93 (MQ=255)

                                                                                        gTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  >  2:3054417/1‑93 (MQ=255)

                                                                                        gTTT‑CAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAA‑‑‑‑ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  >  2:1050943/1‑93 (MQ=255)

GCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTT‑C‑AAAGGCCATGCGCTGGAAG‑GC‑TGGCG‑‑‑‑A‑‑‑‑ACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCC  >  NC_000913/4008280‑4008449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`